; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CaUC02G048500 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC02G048500
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionTransmembrane protein
Genome locationCiama_Chr02:36336888..36337638
RNA-Seq ExpressionCaUC02G048500
SyntenyCaUC02G048500
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAD5323680.1 unnamed protein product [Arabidopsis thaliana]3.9e-0568.52Show/hide
Query:  ATKKKSSNSGGAKKAIGDRRNEQSETGLGFFGAGGHVRISGILCLSAFGVLQPP
        A  KKSS SGGAKK I  RRN Q    L FFGAGGHV ISGIL   AFGV QPP
Subjt:  ATKKKSSNSGGAKKAIGDRRNEQSETGLGFFGAGGHVRISGILCLSAFGVLQPP

GFY96234.1 hypothetical protein Acr_11g0005400 [Actinidia rufa]3.3e-0458.06Show/hide
Query:  NATKKKSSNSGGAKKAIGDRRNEQSETGLGFFGAGGHVRISGILCLSAFGVLQPPSMSEQSS
        NA KKKSS SGG K AIG+ R+E     L FFG  GH +ISG L L AFGV QP + S  SS
Subjt:  NATKKKSSNSGGAKKAIGDRRNEQSETGLGFFGAGGHVRISGILCLSAFGVLQPPSMSEQSS

QHO18661.1 uncharacterized protein DS421_11g322430 [Arachis hypogaea]1.1e-0446.36Show/hide
Query:  KKKSSNSGGAKKAIGDRRNEQ---SETGLGFFGAGGHVRISGILCLSAFGV-LQPPSMSEQSSPESG------SASAALGKFLLVL--------AAIVAT
        KKK S SGG K   GDRR EQ    E  L FFGAGGHV ISGIL  S FGV  QPP  S  +S  S       S      KFLL            IV  
Subjt:  KKKSSNSGGAKKAIGDRRNEQ---SETGLGFFGAGGHVRISGILCLSAFGV-LQPPSMSEQSSPESG------SASAALGKFLLVL--------AAIVAT

Query:  EGAIFNKLCL
        EGA+  K  L
Subjt:  EGAIFNKLCL

QHO48225.1 uncharacterized protein DS421_1g03730 [Arachis hypogaea]3.3e-0457.35Show/hide
Query:  KKKSSNSGGAKKAIGDRRNEQ---SETGLGFFGAGGHVRISGILCLSAFGV-LQPPSMSEQSSPESGS
        KKK S SGG K   GD R EQ    E  L FFGAGGHV ISGIL  S FGV  QPP  S  +S  S S
Subjt:  KKKSSNSGGAKKAIGDRRNEQ---SETGLGFFGAGGHVRISGILCLSAFGV-LQPPSMSEQSSPESGS

XP_016900741.1 PREDICTED: uncharacterized protein LOC107991009 [Cucumis melo]6.3e-2760.14Show/hide
Query:  MSGTGNATKKKSSNSGGAKKAIGDRRNEQSETGLGFFGAGGHVRISGILCLSAFGVLQPPSMSEQSSPESGSA--------------------------S
        MSGTG ATKKKSSNSGGAKKA+GDRRNEQSET LGFFGAGGHVRISGILCLSAFGVLQPP  SE SSP S  +                          S
Subjt:  MSGTGNATKKKSSNSGGAKKAIGDRRNEQSETGLGFFGAGGHVRISGILCLSAFGVLQPPSMSEQSSPESGSA--------------------------S

Query:  AALGKFLLVLAAIVATEGAIFNKLCLKQRDFLLKEKNRGVLRK
          LGK LLVL A +A EGAIF     KQR+   K+K RG+  K
Subjt:  AALGKFLLVLAAIVATEGAIFNKLCLKQRDFLLKEKNRGVLRK

TrEMBL top hitse value%identityAlignment
A0A1S4DXN3 uncharacterized protein LOC1079910093.0e-2760.14Show/hide
Query:  MSGTGNATKKKSSNSGGAKKAIGDRRNEQSETGLGFFGAGGHVRISGILCLSAFGVLQPPSMSEQSSPESGSA--------------------------S
        MSGTG ATKKKSSNSGGAKKA+GDRRNEQSET LGFFGAGGHVRISGILCLSAFGVLQPP  SE SSP S  +                          S
Subjt:  MSGTGNATKKKSSNSGGAKKAIGDRRNEQSETGLGFFGAGGHVRISGILCLSAFGVLQPPSMSEQSSPESGSA--------------------------S

Query:  AALGKFLLVLAAIVATEGAIFNKLCLKQRDFLLKEKNRGVLRK
          LGK LLVL A +A EGAIF     KQR+   K+K RG+  K
Subjt:  AALGKFLLVLAAIVATEGAIFNKLCLKQRDFLLKEKNRGVLRK

A0A5D3BCF0 Transmembrane protein3.0e-2760.14Show/hide
Query:  MSGTGNATKKKSSNSGGAKKAIGDRRNEQSETGLGFFGAGGHVRISGILCLSAFGVLQPPSMSEQSSPESGSA--------------------------S
        MSGTG ATKKKSSNSGGAKKA+GDRRNEQSET LGFFGAGGHVRISGILCLSAFGVLQPP  SE SSP S  +                          S
Subjt:  MSGTGNATKKKSSNSGGAKKAIGDRRNEQSETGLGFFGAGGHVRISGILCLSAFGVLQPPSMSEQSSPESGSA--------------------------S

Query:  AALGKFLLVLAAIVATEGAIFNKLCLKQRDFLLKEKNRGVLRK
          LGK LLVL A +A EGAIF     KQR+   K+K RG+  K
Subjt:  AALGKFLLVLAAIVATEGAIFNKLCLKQRDFLLKEKNRGVLRK

A0A7G2EN36 (thale cress) hypothetical protein1.9e-0568.52Show/hide
Query:  ATKKKSSNSGGAKKAIGDRRNEQSETGLGFFGAGGHVRISGILCLSAFGVLQPP
        A  KKSS SGGAKK I  RRN Q    L FFGAGGHV ISGIL   AFGV QPP
Subjt:  ATKKKSSNSGGAKKAIGDRRNEQSETGLGFFGAGGHVRISGILCLSAFGVLQPP

A0A7J0FBZ7 Uncharacterized protein1.6e-0458.06Show/hide
Query:  NATKKKSSNSGGAKKAIGDRRNEQSETGLGFFGAGGHVRISGILCLSAFGVLQPPSMSEQSS
        NA KKKSS SGG K AIG+ R+E     L FFG  GH +ISG L L AFGV QP + S  SS
Subjt:  NATKKKSSNSGGAKKAIGDRRNEQSETGLGFFGAGGHVRISGILCLSAFGVLQPPSMSEQSS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G20900.1 unknown protein6.5e-0659.62Show/hide
Query:  KKKSSNSGGAKKAIGDRRNEQSETGLGFFGAGGHVRISGILCLSAFGVLQPP
        K    N   AKK I  RRN Q    L FFGAGGHV ISGIL   AFGV QPP
Subjt:  KKKSSNSGGAKKAIGDRRNEQSETGLGFFGAGGHVRISGILCLSAFGVLQPP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCGGCACCGGCAACGCGACGAAGAAGAAGAGCTCTAATTCTGGAGGGGCAAAAAAGGCAATAGGTGATCGTCGGAATGAGCAATCGGAAACGGGTCTTGGTTTCTT
CGGCGCCGGCGGACACGTCAGAATCTCCGGTATTCTGTGTCTCTCTGCTTTTGGAGTGCTGCAACCGCCGTCGATGTCAGAACAGTCGTCGCCGGAATCTGGTTCTGCTT
CTGCTGCTTTGGGTAAATTTCTTCTGGTTCTTGCGGCCATTGTTGCTACGGAAGGGGCCATTTTCAATAAACTCTGTTTGAAACAGAGGGATTTTTTACTGAAAGAGAAA
AACAGAGGGGTTCTGCGAAAGACTGAAGCTTTAGAAGGGATTTGTTCTAAAAGGAAAAGGAGAAAGAAGGGTTTGGCATTTCGTGCCCATCTCGAGCTGATTATAAGCAG
AGATAATCAGGGTAGGCTGCCCGCTGCCCGAGGCAGCACTCTTCTTGGGATTACTGCTAATTTTGATGAGTTAAAATCAGGGCAGGGAGCTACCCGCTGCCCGTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCCGGCACCGGCAACGCGACGAAGAAGAAGAGCTCTAATTCTGGAGGGGCAAAAAAGGCAATAGGTGATCGTCGGAATGAGCAATCGGAAACGGGTCTTGGTTTCTT
CGGCGCCGGCGGACACGTCAGAATCTCCGGTATTCTGTGTCTCTCTGCTTTTGGAGTGCTGCAACCGCCGTCGATGTCAGAACAGTCGTCGCCGGAATCTGGTTCTGCTT
CTGCTGCTTTGGGTAAATTTCTTCTGGTTCTTGCGGCCATTGTTGCTACGGAAGGGGCCATTTTCAATAAACTCTGTTTGAAACAGAGGGATTTTTTACTGAAAGAGAAA
AACAGAGGGGTTCTGCGAAAGACTGAAGCTTTAGAAGGGATTTGTTCTAAAAGGAAAAGGAGAAAGAAGGGTTTGGCATTTCGTGCCCATCTCGAGCTGATTATAAGCAG
AGATAATCAGGGTAGGCTGCCCGCTGCCCGAGGCAGCACTCTTCTTGGGATTACTGCTAATTTTGATGAGTTAAAATCAGGGCAGGGAGCTACCCGCTGCCCGTAG
Protein sequenceShow/hide protein sequence
MSGTGNATKKKSSNSGGAKKAIGDRRNEQSETGLGFFGAGGHVRISGILCLSAFGVLQPPSMSEQSSPESGSASAALGKFLLVLAAIVATEGAIFNKLCLKQRDFLLKEK
NRGVLRKTEALEGICSKRKRRKKGLAFRAHLELIISRDNQGRLPAARGSTLLGITANFDELKSGQGATRCP