CuGenDBv2

Gene ID	CaUC02G049730
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	Lysine--tRNA ligase
Genome location	Ciama_Chr02:37429661..37437623
RNA-Seq Expression	CaUC02G049730
Synteny	CaUC02G049730
Gene Ontology terms	GO:0006430 - lysyl-tRNA aminoacylation (biological process) GO:0048481 - plant ovule development (biological process) GO:0005739 - mitochondrion (cellular component) GO:0005829 - cytosol (cellular component) GO:0009507 - chloroplast (cellular component) GO:0000049 - tRNA binding (molecular function) GO:0003677 - DNA binding (molecular function) GO:0003729 - mRNA binding (molecular function) GO:0004824 - lysine-tRNA ligase activity (molecular function) GO:0005524 - ATP binding (molecular function)
InterPro domains	IPR004365 - OB-fold nucleic acid binding domain, AA-tRNA synthetase-type IPR012340 - Nucleic acid-binding, OB-fold IPR044136 - Lysine-tRNA ligase, class II, N-terminal

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6605831.1 Lysine--tRNA ligase, chloroplastic/mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]

2.5e-103

85.77

Show/hide

Query:  MEAVKLYGAIWSQPFLKHLIRLASSSSTITALAPKSSRSTLFFRRCSSAATSTAGDGKPKLSARTRRSSPSTTSPPSSTSDREAVRAIRLKKVEELRSKG
        MEA+KLYGA+ SQP  KHLIRLASSSSTI+ALAPKSSRS LF RRCSSAATSTAGDGK KLS R+RRSS STTS P+STSDREAVRAIRLKKVEELRSKG
Subjt:  MEAVKLYGAIWSQPFLKHLIRLASSSSTITALAPKSSRSTLFFRRCSSAATSTAGDGKPKLSARTRRSSPSTTSPPSSTSDREAVRAIRLKKVEELRSKG

Query:  LEPFAYSWDRTHTANQLQELYKHLGNGEESNTDADCVSIAGRIVARRAFGKLVFLTLRDDSGTI------------QFDQLKNLVDIGDILGARGSIKRT
        LEP+AY+WDRTHTA+QLQELYKHLGNGEESN+D   VSIAGRIVARRAFGKL FLTLRDDSGTI            QFDQLKNLVDIGDILGARGSIKRT
Subjt:  LEPFAYSWDRTHTANQLQELYKHLGNGEESNTDADCVSIAGRIVARRAFGKLVFLTLRDDSGTI------------QFDQLKNLVDIGDILGARGSIKRT

Query:  EKGELSVCVNSFEILTKSLLPLPDKYHGLTDIDKRYRQR
        EKGELSVCVNSFEILTKSLLPLPDKYHGLTDIDKRYRQR
Subjt:  EKGELSVCVNSFEILTKSLLPLPDKYHGLTDIDKRYRQR

KAG7035789.1 Lysine--tRNA ligase, chloroplastic/mitochondrial [Cucurbita argyrosperma subsp. argyrosperma]

2.5e-103

85.77

Show/hide

Query:  MEAVKLYGAIWSQPFLKHLIRLASSSSTITALAPKSSRSTLFFRRCSSAATSTAGDGKPKLSARTRRSSPSTTSPPSSTSDREAVRAIRLKKVEELRSKG
        MEA+KLYGA+ SQP  KHLIRLASSSSTI+ALAPKSSRS LF RRCSSAATSTAGDGK KLS R+RRSS STTS P+STSDREAVRAIRLKKVEELRSKG
Subjt:  MEAVKLYGAIWSQPFLKHLIRLASSSSTITALAPKSSRSTLFFRRCSSAATSTAGDGKPKLSARTRRSSPSTTSPPSSTSDREAVRAIRLKKVEELRSKG

Query:  LEPFAYSWDRTHTANQLQELYKHLGNGEESNTDADCVSIAGRIVARRAFGKLVFLTLRDDSGTI------------QFDQLKNLVDIGDILGARGSIKRT
        LEP+AY+WDRTHTA+QLQELYKHLGNGEESN+D   VSIAGRIVARRAFGKL FLTLRDDSGTI            QFDQLKNLVDIGDILGARGSIKRT
Subjt:  LEPFAYSWDRTHTANQLQELYKHLGNGEESNTDADCVSIAGRIVARRAFGKLVFLTLRDDSGTI------------QFDQLKNLVDIGDILGARGSIKRT

Query:  EKGELSVCVNSFEILTKSLLPLPDKYHGLTDIDKRYRQR
        EKGELSVCVNSFEILTKSLLPLPDKYHGLTDIDKRYRQR
Subjt:  EKGELSVCVNSFEILTKSLLPLPDKYHGLTDIDKRYRQR

XP_022958622.1 lysine--tRNA ligase, chloroplastic/mitochondrial [Cucurbita moschata]

3.3e-103

85.77

Show/hide

Query:  MEAVKLYGAIWSQPFLKHLIRLASSSSTITALAPKSSRSTLFFRRCSSAATSTAGDGKPKLSARTRRSSPSTTSPPSSTSDREAVRAIRLKKVEELRSKG
        MEA+KLYGA+ SQP  KHLIRLASSSSTI+ALAPKSSRS LF RRCSSAATSTAGDGK KLS R+RRSS STTS P+STSDREAVRAIRLKKVEELRSKG
Subjt:  MEAVKLYGAIWSQPFLKHLIRLASSSSTITALAPKSSRSTLFFRRCSSAATSTAGDGKPKLSARTRRSSPSTTSPPSSTSDREAVRAIRLKKVEELRSKG

Query:  LEPFAYSWDRTHTANQLQELYKHLGNGEESNTDADCVSIAGRIVARRAFGKLVFLTLRDDSGTI------------QFDQLKNLVDIGDILGARGSIKRT
        LEP+AY+WDRTHTA+QLQELYKHLGNGEESN D   VSIAGRIVARRAFGKL FLTLRDDSGTI            QFDQLKNLVDIGDILGARGSIKRT
Subjt:  LEPFAYSWDRTHTANQLQELYKHLGNGEESNTDADCVSIAGRIVARRAFGKLVFLTLRDDSGTI------------QFDQLKNLVDIGDILGARGSIKRT

Query:  EKGELSVCVNSFEILTKSLLPLPDKYHGLTDIDKRYRQR
        EKGELSVCVNSFEILTKSLLPLPDKYHGLTDIDKRYRQR
Subjt:  EKGELSVCVNSFEILTKSLLPLPDKYHGLTDIDKRYRQR

XP_023534158.1 lysine--tRNA ligase, chloroplastic/mitochondrial [Cucurbita pepo subsp. pepo]

1.1e-103

86.19

Show/hide

Query:  MEAVKLYGAIWSQPFLKHLIRLASSSSTITALAPKSSRSTLFFRRCSSAATSTAGDGKPKLSARTRRSSPSTTSPPSSTSDREAVRAIRLKKVEELRSKG
        MEA+KLYGA+ SQP  KHLIRLASSSSTI+ALAPKSSRS LF RRCSSAATSTAGDGK KLS R+RRSS STTS PSSTSDREAVRAIRLKKVEELRSKG
Subjt:  MEAVKLYGAIWSQPFLKHLIRLASSSSTITALAPKSSRSTLFFRRCSSAATSTAGDGKPKLSARTRRSSPSTTSPPSSTSDREAVRAIRLKKVEELRSKG

Query:  LEPFAYSWDRTHTANQLQELYKHLGNGEESNTDADCVSIAGRIVARRAFGKLVFLTLRDDSGTI------------QFDQLKNLVDIGDILGARGSIKRT
        LEP+AY+WDRTHTA+QLQELYKHLGNGEESN+D   VSIAGRIVARRAFGKL FLTLRDDSGTI            QFDQLKNLVDIGDILGARGSIKRT
Subjt:  LEPFAYSWDRTHTANQLQELYKHLGNGEESNTDADCVSIAGRIVARRAFGKLVFLTLRDDSGTI------------QFDQLKNLVDIGDILGARGSIKRT

Query:  EKGELSVCVNSFEILTKSLLPLPDKYHGLTDIDKRYRQR
        EKGELSVCVNSFEILTKSLLPLPDKYHGLTDIDKRYRQR
Subjt:  EKGELSVCVNSFEILTKSLLPLPDKYHGLTDIDKRYRQR

XP_038901525.1 lysine--tRNA ligase, chloroplastic/mitochondrial [Benincasa hispida]

1.7e-107

87.87

Show/hide

Query:  MEAVKLYGAIWSQPFLKHLIRLASSSSTITALAPKSSRSTLFFRRCSSAATSTAGDGKPKLSARTRRSSPSTTSPPSSTSDREAVRAIRLKKVEELRSKG
        MEA+KLYG I+SQPF KHLIRLASSSST+TALA KSSRSTLF RRCSSAA STAGDGK KLSARTRRSS STTS PSSTSDREA+RAIRLKKVEELRSKG
Subjt:  MEAVKLYGAIWSQPFLKHLIRLASSSSTITALAPKSSRSTLFFRRCSSAATSTAGDGKPKLSARTRRSSPSTTSPPSSTSDREAVRAIRLKKVEELRSKG

Query:  LEPFAYSWDRTHTANQLQELYKHLGNGEESNTDADCVSIAGRIVARRAFGKLVFLTLRDDSGTI------------QFDQLKNLVDIGDILGARGSIKRT
        LEP+AYSWDRTHTANQLQELYKHLGNGEESN+DADCVSIAGRIVARRAFGKL FLTLRDDSGTI            QFDQ+KNLVDIGDILGARGSIKRT
Subjt:  LEPFAYSWDRTHTANQLQELYKHLGNGEESNTDADCVSIAGRIVARRAFGKLVFLTLRDDSGTI------------QFDQLKNLVDIGDILGARGSIKRT

Query:  EKGELSVCVNSFEILTKSLLPLPDKYHGLTDIDKRYRQR
        EKGELSVCVNSFEILTKSLLPLPDKYHGLTD+DKRYRQR
Subjt:  EKGELSVCVNSFEILTKSLLPLPDKYHGLTDIDKRYRQR

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L1N3 Lysine--tRNA ligase

7.9e-103

84.52

Show/hide

Query:  MEAVKLYGAIWSQPFLKHLIRLASSSSTITALAPKSSRSTLFFRRCSSAATSTAGDGKPKLSARTRRSSPSTTSPPSSTSDREAVRAIRLKKVEELRSKG
        MEA   Y  I +QPF KHL RLASS+STITAL PKSSRST F RRCSSAATSTAGDGK KLS RTRRSS STTSPPSSTSDREAVRAIRLKKVEELRSKG
Subjt:  MEAVKLYGAIWSQPFLKHLIRLASSSSTITALAPKSSRSTLFFRRCSSAATSTAGDGKPKLSARTRRSSPSTTSPPSSTSDREAVRAIRLKKVEELRSKG

Query:  LEPFAYSWDRTHTANQLQELYKHLGNGEESNTDADCVSIAGRIVARRAFGKLVFLTLRDDSGTI------------QFDQLKNLVDIGDILGARGSIKRT
         EP+AY+WDRTHTANQLQELYKHLGNGEESN D DCVS+AGRIVARRAFGKL FLTLRDDSGTI            QFDQLKNLVDIGDILG RGSIKRT
Subjt:  LEPFAYSWDRTHTANQLQELYKHLGNGEESNTDADCVSIAGRIVARRAFGKLVFLTLRDDSGTI------------QFDQLKNLVDIGDILGARGSIKRT

Query:  EKGELSVCVNSFEILTKSLLPLPDKYHGLTDIDKRYRQR
        EKGELSVCVNSFEILTKSLLPLPDKYHGLTD+DKRYRQR
Subjt:  EKGELSVCVNSFEILTKSLLPLPDKYHGLTDIDKRYRQR

A0A1S3BN21 Lysine--tRNA ligase

1.1e-101

83.68

Show/hide

Query:  MEAVKLYGAIWSQPFLKHLIRLASSSSTITALAPKSSRSTLFFRRCSSAATSTAGDGKPKLSARTRRSSPSTTSPPSSTSDREAVRAIRLKKVEELRSKG
        MEA+K YG I SQPF KH+IRL SS+STITAL PKSSRS  F R CSSAA STAGDGK KLS RTRRSS STTSPPSSTSDREAVRAIRLKKVEELRSKG
Subjt:  MEAVKLYGAIWSQPFLKHLIRLASSSSTITALAPKSSRSTLFFRRCSSAATSTAGDGKPKLSARTRRSSPSTTSPPSSTSDREAVRAIRLKKVEELRSKG

Query:  LEPFAYSWDRTHTANQLQELYKHLGNGEESNTDADCVSIAGRIVARRAFGKLVFLTLRDDSGTI------------QFDQLKNLVDIGDILGARGSIKRT
         EP+AY+WDRTHTANQLQELYKHLGNGEESN D DCVS+AGRIVARRAFGKL FLTLRDDSGTI            QFD LKNLVDIGDILG RGSIKRT
Subjt:  LEPFAYSWDRTHTANQLQELYKHLGNGEESNTDADCVSIAGRIVARRAFGKLVFLTLRDDSGTI------------QFDQLKNLVDIGDILGARGSIKRT

Query:  EKGELSVCVNSFEILTKSLLPLPDKYHGLTDIDKRYRQR
        EKGELSVCVNSFEILTKSLLPLPDKYHGLTD+DKRYRQR
Subjt:  EKGELSVCVNSFEILTKSLLPLPDKYHGLTDIDKRYRQR

A0A1S3BP13 Lysyl-tRNA synthetase

1.1e-101

83.68

Show/hide

Query:  MEAVKLYGAIWSQPFLKHLIRLASSSSTITALAPKSSRSTLFFRRCSSAATSTAGDGKPKLSARTRRSSPSTTSPPSSTSDREAVRAIRLKKVEELRSKG
        MEA+K YG I SQPF KH+IRL SS+STITAL PKSSRS  F R CSSAA STAGDGK KLS RTRRSS STTSPPSSTSDREAVRAIRLKKVEELRSKG
Subjt:  MEAVKLYGAIWSQPFLKHLIRLASSSSTITALAPKSSRSTLFFRRCSSAATSTAGDGKPKLSARTRRSSPSTTSPPSSTSDREAVRAIRLKKVEELRSKG

Query:  LEPFAYSWDRTHTANQLQELYKHLGNGEESNTDADCVSIAGRIVARRAFGKLVFLTLRDDSGTI------------QFDQLKNLVDIGDILGARGSIKRT
         EP+AY+WDRTHTANQLQELYKHLGNGEESN D DCVS+AGRIVARRAFGKL FLTLRDDSGTI            QFD LKNLVDIGDILG RGSIKRT
Subjt:  LEPFAYSWDRTHTANQLQELYKHLGNGEESNTDADCVSIAGRIVARRAFGKLVFLTLRDDSGTI------------QFDQLKNLVDIGDILGARGSIKRT

Query:  EKGELSVCVNSFEILTKSLLPLPDKYHGLTDIDKRYRQR
        EKGELSVCVNSFEILTKSLLPLPDKYHGLTD+DKRYRQR
Subjt:  EKGELSVCVNSFEILTKSLLPLPDKYHGLTDIDKRYRQR

A0A5A7TFD0 Lysine--tRNA ligase

1.1e-101

83.68

Show/hide

Query:  MEAVKLYGAIWSQPFLKHLIRLASSSSTITALAPKSSRSTLFFRRCSSAATSTAGDGKPKLSARTRRSSPSTTSPPSSTSDREAVRAIRLKKVEELRSKG
        MEA+K YG I SQPF KH+IRL SS+STITAL PKSSRS  F R CSSAA STAGDGK KLS RTRRSS STTSPPSSTSDREAVRAIRLKKVEELRSKG
Subjt:  MEAVKLYGAIWSQPFLKHLIRLASSSSTITALAPKSSRSTLFFRRCSSAATSTAGDGKPKLSARTRRSSPSTTSPPSSTSDREAVRAIRLKKVEELRSKG

Query:  LEPFAYSWDRTHTANQLQELYKHLGNGEESNTDADCVSIAGRIVARRAFGKLVFLTLRDDSGTI------------QFDQLKNLVDIGDILGARGSIKRT
         EP+AY+WDRTHTANQLQELYKHLGNGEESN D DCVS+AGRIVARRAFGKL FLTLRDDSGTI            QFD LKNLVDIGDILG RGSIKRT
Subjt:  LEPFAYSWDRTHTANQLQELYKHLGNGEESNTDADCVSIAGRIVARRAFGKLVFLTLRDDSGTI------------QFDQLKNLVDIGDILGARGSIKRT

Query:  EKGELSVCVNSFEILTKSLLPLPDKYHGLTDIDKRYRQR
        EKGELSVCVNSFEILTKSLLPLPDKYHGLTD+DKRYRQR
Subjt:  EKGELSVCVNSFEILTKSLLPLPDKYHGLTDIDKRYRQR

A0A6J1H2C3 Lysine--tRNA ligase

1.6e-103

85.77

Show/hide

Query:  MEAVKLYGAIWSQPFLKHLIRLASSSSTITALAPKSSRSTLFFRRCSSAATSTAGDGKPKLSARTRRSSPSTTSPPSSTSDREAVRAIRLKKVEELRSKG
        MEA+KLYGA+ SQP  KHLIRLASSSSTI+ALAPKSSRS LF RRCSSAATSTAGDGK KLS R+RRSS STTS P+STSDREAVRAIRLKKVEELRSKG
Subjt:  MEAVKLYGAIWSQPFLKHLIRLASSSSTITALAPKSSRSTLFFRRCSSAATSTAGDGKPKLSARTRRSSPSTTSPPSSTSDREAVRAIRLKKVEELRSKG

Query:  LEPFAYSWDRTHTANQLQELYKHLGNGEESNTDADCVSIAGRIVARRAFGKLVFLTLRDDSGTI------------QFDQLKNLVDIGDILGARGSIKRT
        LEP+AY+WDRTHTA+QLQELYKHLGNGEESN D   VSIAGRIVARRAFGKL FLTLRDDSGTI            QFDQLKNLVDIGDILGARGSIKRT
Subjt:  LEPFAYSWDRTHTANQLQELYKHLGNGEESNTDADCVSIAGRIVARRAFGKLVFLTLRDDSGTI------------QFDQLKNLVDIGDILGARGSIKRT

Query:  EKGELSVCVNSFEILTKSLLPLPDKYHGLTDIDKRYRQR
        EKGELSVCVNSFEILTKSLLPLPDKYHGLTDIDKRYRQR
Subjt:  EKGELSVCVNSFEILTKSLLPLPDKYHGLTDIDKRYRQR

SwissProt top hits

e value

%identity

Alignment

P73443 Lysine--tRNA ligase

8.0e-44

55.36

Show/hide

Query:  STSDREAVRAIRLKKVEELRSKGLEPFAYSWDRTHTANQLQELYKHLGNGEESNTDADCVSIAGRIVARRAFGKLVFLTLRDDSGTIQ------------
        S S  E +RA RL+K E+LR  GL P+AY+W+ TH A  LQE Y+ L NGEE +     V+IAGRI+ARR  GKL F TL+D+SGTIQ            
Subjt:  STSDREAVRAIRLKKVEELRSKGLEPFAYSWDRTHTANQLQELYKHLGNGEESNTDADCVSIAGRIVARRAFGKLVFLTLRDDSGTIQ------------

Query:  ------FDQLKNLVDIGDILGARGSIKRTEKGELSVCVNSFEILTKSLLPLPDKYHGLTDIDKRYRQR
              F+ LK + D+GDILG  G++KRTEKGELSV V ++ +LTKSLLPLPDK+HGLTD +KRYRQR
Subjt:  ------FDQLKNLVDIGDILGARGSIKRTEKGELSVCVNSFEILTKSLLPLPDKYHGLTDIDKRYRQR

Q3M8C8 Lysine--tRNA ligase

3.6e-44

56.71

Show/hide

Query:  EAVRAIRLKKVEELRSKGLEPFAYSWDRTHTANQLQELYKHLGNGEESNTDADCVSIAGRIVARRAFGKLVFLTLRDDSGTIQ-----------------
        E +RA RL+KVE+L+  G  P+AY W+ TH A QLQE +  L +GEE +T+   V+IAGRI+ARR FGKL F TL D++GTIQ                 
Subjt:  EAVRAIRLKKVEELRSKGLEPFAYSWDRTHTANQLQELYKHLGNGEESNTDADCVSIAGRIVARRAFGKLVFLTLRDDSGTIQ-----------------

Query:  --FDQLKNLVDIGDILGARGSIKRTEKGELSVCVNSFEILTKSLLPLPDKYHGLTDIDKRYRQR
          F+ LK L D+GDILGA+G+IKRTEKGELS+ V  + ILTKSLLPLPDK+HGLTD+ KRYRQR
Subjt:  --FDQLKNLVDIGDILGARGSIKRTEKGELSVCVNSFEILTKSLLPLPDKYHGLTDIDKRYRQR

Q8DMA9 Lysine--tRNA ligase

9.4e-45

57.86

Show/hide

Query:  VRAIRLKKVEELRSKGLEPFAYSWDRTHTANQLQELYKHLGNGEESNTDADCVSIAGRIVARRAFGKLVFLTLRDDSGTIQ----------------FDQ
        +RA R++K + L+++G+ P+AY W+RTHTA  LQ+ Y HL  GE      D VS+AGRI+ARR FGKL F TL+DDSGTIQ                F  
Subjt:  VRAIRLKKVEELRSKGLEPFAYSWDRTHTANQLQELYKHLGNGEESNTDADCVSIAGRIVARRAFGKLVFLTLRDDSGTIQ----------------FDQ

Query:  LKNLVDIGDILGARGSIKRTEKGELSVCVNSFEILTKSLLPLPDKYHGLTDIDKRYRQR
        LK+L D+GDILGA G++KRTEKGELSV V S+ +LTKSLLPLPDK+HGLTD++KRYRQR
Subjt:  LKNLVDIGDILGARGSIKRTEKGELSVCVNSFEILTKSLLPLPDKYHGLTDIDKRYRQR

Q8YPW9 Lysine--tRNA ligase

3.6e-44

57.32

Show/hide

Query:  EAVRAIRLKKVEELRSKGLEPFAYSWDRTHTANQLQELYKHLGNGEESNTDADCVSIAGRIVARRAFGKLVFLTLRDDSGTIQ-----------------
        E +RA RL+KVE+L+  G  P+AY W+ TH A QLQE +  L +GEE  T+   V+IAGRI+ARR FGKL F TL D++GTIQ                 
Subjt:  EAVRAIRLKKVEELRSKGLEPFAYSWDRTHTANQLQELYKHLGNGEESNTDADCVSIAGRIVARRAFGKLVFLTLRDDSGTIQ-----------------

Query:  --FDQLKNLVDIGDILGARGSIKRTEKGELSVCVNSFEILTKSLLPLPDKYHGLTDIDKRYRQR
          F+ LK L D+GDILGA+G+IKRTEKGELSV V  + ILTKSLLPLPDK+HGLTD+ KRYRQR
Subjt:  --FDQLKNLVDIGDILGARGSIKRTEKGELSVCVNSFEILTKSLLPLPDKYHGLTDIDKRYRQR

Q9LJE2 Lysine--tRNA ligase, chloroplastic/mitochondrial

9.1e-72

63.01

Show/hide

Query:  MEAVKLYGAIWSQPFLKHLIRLASSSSTI-TALAPKSSRSTLFFRRCSSAATS------TAGDGKPKLSARTRRSSPSTTSPPSSTSDREAVRAIRLKKV
        MEA+K++ ++ + P LK L+RL+SSS+ + T +  + S       RC+SAA+S      TA   KP  S R RRS+ S+    +STSDREA+R+IRLKKV
Subjt:  MEAVKLYGAIWSQPFLKHLIRLASSSSTI-TALAPKSSRSTLFFRRCSSAATS------TAGDGKPKLSARTRRSSPSTTSPPSSTSDREAVRAIRLKKV

Query:  EELRSKGLEPFAYSWDRTHTANQLQELYKHLGNGEESNTDADCVSIAGRIVARRAFGKLVFLTLRDDSGTI------------QFDQLKNLVDIGDILGA
        EELR +GLEP+AY W+++H+ANQLQE+YKHL NGEES+ + DCVSIAGR+VARRAFGKL FLTLRDDSGTI            QF+QLK  +DIGDILGA
Subjt:  EELRSKGLEPFAYSWDRTHTANQLQELYKHLGNGEESNTDADCVSIAGRIVARRAFGKLVFLTLRDDSGTI------------QFDQLKNLVDIGDILGA

Query:  RGSIKRTEKGELSVCVNSFEILTKSLLPLPDKYHGLTDIDKRYRQR
         GS+KRTEKGELS+CVNSF ILTKSLLPLPDKYHGLTDIDKRYRQR
Subjt:  RGSIKRTEKGELSVCVNSFEILTKSLLPLPDKYHGLTDIDKRYRQR

Arabidopsis top hits

e value

%identity

Alignment

AT3G11710.1 lysyl-tRNA synthetase 1

6.1e-07

27.27

Show/hide

Query:  KPKLSARTRRSSPSTTSPPSSTSDREAVRAI-----RLKKVEELRSKGLEPFAYSWDRTHTANQLQELYKHLGNGEESNTDADCVSIAGRIVARR-AFGK
        K +  A   + +P  +S  +  +D E + A      RLK +   ++KG  P+ + +  + +  +  E Y  L NG+      +  S+AGRI+++R +  K
Subjt:  KPKLSARTRRSSPSTTSPPSSTSDREAVRAI-----RLKKVEELRSKGLEPFAYSWDRTHTANQLQELYKHLGNGEESNTDADCVSIAGRIVARR-AFGK

Query:  LVFLTLRDDSGTIQ--------------FDQLKNLVDIGDILGARGSIKRTEKGELSVCVNSFEILTKSLLPLPDK
        L F  L  D   +Q              F +L +    GDI+G  G   +T++GELS+   SF +L+  L  +P K
Subjt:  LVFLTLRDDSGTIQ--------------FDQLKNLVDIGDILGARGSIKRTEKGELSVCVNSFEILTKSLLPLPDK

AT3G13490.1 Lysyl-tRNA synthetase, class II

6.4e-73

63.01

Show/hide

Query:  MEAVKLYGAIWSQPFLKHLIRLASSSSTI-TALAPKSSRSTLFFRRCSSAATS------TAGDGKPKLSARTRRSSPSTTSPPSSTSDREAVRAIRLKKV
        MEA+K++ ++ + P LK L+RL+SSS+ + T +  + S       RC+SAA+S      TA   KP  S R RRS+ S+    +STSDREA+R+IRLKKV
Subjt:  MEAVKLYGAIWSQPFLKHLIRLASSSSTI-TALAPKSSRSTLFFRRCSSAATS------TAGDGKPKLSARTRRSSPSTTSPPSSTSDREAVRAIRLKKV

Query:  EELRSKGLEPFAYSWDRTHTANQLQELYKHLGNGEESNTDADCVSIAGRIVARRAFGKLVFLTLRDDSGTI------------QFDQLKNLVDIGDILGA
        EELR +GLEP+AY W+++H+ANQLQE+YKHL NGEES+ + DCVSIAGR+VARRAFGKL FLTLRDDSGTI            QF+QLK  +DIGDILGA
Subjt:  EELRSKGLEPFAYSWDRTHTANQLQELYKHLGNGEESNTDADCVSIAGRIVARRAFGKLVFLTLRDDSGTI------------QFDQLKNLVDIGDILGA

Query:  RGSIKRTEKGELSVCVNSFEILTKSLLPLPDKYHGLTDIDKRYRQR
         GS+KRTEKGELS+CVNSF ILTKSLLPLPDKYHGLTDIDKRYRQR
Subjt:  RGSIKRTEKGELSVCVNSFEILTKSLLPLPDKYHGLTDIDKRYRQR

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGAAGCCGTGAAGCTATACGGGGCAATATGGTCCCAGCCATTCCTCAAGCACCTCATTCGCTTAGCTTCCTCCTCTTCCACAATCACCGCCCTCGCTCCCAAA
TCTTCTCGCTCCACCCTTTTCTTTCGCCGCTGTTCTTCCGCTGCAACCTCCACTGCTGGAGACGGAAAGCCTAAGCTTTCAGCGCGTACCCGCCGTTCTTCCCCC
TCGACTACGTCGCCACCTTCTTCCACGTCTGACAGGGAGGCGGTTCGTGCAATTCGCTTAAAGAAGGTTGAAGAATTGAGGAGCAAGGGGCTGGAACCTTTTGCG
TATTCGTGGGACCGGACTCATACTGCTAATCAGCTGCAAGAGTTGTATAAGCATCTAGGTAATGGCGAAGAATCTAATACCGACGCGGACTGTGTGTCAATAGCT
GGAAGAATTGTGGCTCGCCGAGCGTTTGGAAAGCTTGTATTTCTGACGTTGAGAGATGATTCTGGTACAATTCAGTTTGATCAGCTAAAGAATCTTGTTGATATA
GGAGATATTCTTGGTGCTCGAGGTTCAATTAAGCGAACGGAGAAAGGGGAGCTTTCTGTTTGTGTGAATTCTTTTGAAATCCTGACAAAGTCATTACTTCCACTT
CCTGACAAATATCATGGTTTAACTGATATTGATAAGCGCTACCGCCAAAGAGGCGAGGCGCCCAGGGGCCTATGTGGCTCGTGTGTGCATGGGGCAAGCAAGTTC
AATCAGGCGCTCGCCCCTTTGCGCCTTTGGTCGCTTGGCGGCGCCTTGCGCCTGAGAGTTCAAAAGCGAACACCAACTATACAAGTAATTAGTGATGAAGAGGAA
GACTACGAAGATGAGGAGGAATTAGACATTGAGGAGGACAATGGCCAAGGAGGAGCAATGGATGAGACCTTAGGCTTAGATGGGGAGGATGATGAATCTGACTTT
GATGATGTTTTAAACTTTTACTTTTAG

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MEAVKLYGAIWSQPFLKHLIRLASSSSTITALAPKSSRSTLFFRRCSSAATSTAGDGKPKLSARTRRSSPSTTSPPSSTSDREAVRAIRLKKVEELRSKGLEPFA
YSWDRTHTANQLQELYKHLGNGEESNTDADCVSIAGRIVARRAFGKLVFLTLRDDSGTIQFDQLKNLVDIGDILGARGSIKRTEKGELSVCVNSFEILTKSLLPL
PDKYHGLTDIDKRYRQRGEAPRGLCGSCVHGASKFNQALAPLRLWSLGGALRLRVQKRTPTIQVISDEEEDYEDEEELDIEEDNGQGGAMDETLGLDGEDDESDF
DDVLNFYF

CaUC02G049730 (gene) of Watermelon (USVL246-FR2) v1 genome