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CaUC03G062000 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC03G062000
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
Descriptionpathogenesis-related protein 1-like
Genome locationCiama_Chr03:26094549..26094913
RNA-Seq ExpressionCaUC03G062000
SyntenyCaUC03G062000
Gene Ontology termsNA
InterPro domainsIPR001283 - Cysteine-rich secretory protein-related
IPR014044 - CAP domain
IPR035940 - CAP superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031381.1 pathogen-related protein 1 [Cucumis melo var. makuwa]1.8e-1235.9Show/hide
Query:  AQVGVGPIQWDENVATYAKEF----------------MGRTLHW-------------------FYDYATNSCISAK-------VVWKDSITIGCAKPNCR
        AQVGVGP+ W++ VA YA ++                 G  + W                   FY+Y TNSC+  K       VVW++S+ IGCAK  C+
Subjt:  AQVGVGPIQWDENVATYAKEF----------------MGRTLHW-------------------FYDYATNSCISAK-------VVWKDSITIGCAKPNCR

Query:  TGAAFIVCNYDPHGHIK
        +G  FI+CNYDP G+I+
Subjt:  TGAAFIVCNYDPHGHIK

XP_004136924.2 pathogenesis-related protein 1 [Cucumis sativus]1.8e-1238.98Show/hide
Query:  AQVGVGPIQWDENVATYAKEF----------------MGRTLHW-------------------FYDYATNSCISA------KVVWKDSITIGCAKPNC-R
        AQVGVGP+ WDE VA YA+++                 G  L W                   FYDYA+NSC+ +      +VVWK+S+ IGCAK  C  
Subjt:  AQVGVGPIQWDENVATYAKEF----------------MGRTLHW-------------------FYDYATNSCISA------KVVWKDSITIGCAKPNC-R

Query:  TGAAFIVCNYDPHGHIKN
         G  FI CNYDP G+  N
Subjt:  TGAAFIVCNYDPHGHIKN

XP_008455066.1 PREDICTED: basic form of pathogenesis-related protein 1 [Cucumis melo]1.4e-1238.98Show/hide
Query:  AQVGVGPIQWDENVATYAKEF----------------MGRTLHW-------------------FYDYATNSCISA------KVVWKDSITIGCAKPNC-R
        AQVGVGP+ WDE VA YA+++                 G  L W                   FYDYA+NSC+ +      +VVWK+S+ IGCAK  C  
Subjt:  AQVGVGPIQWDENVATYAKEF----------------MGRTLHW-------------------FYDYATNSCISA------KVVWKDSITIGCAKPNC-R

Query:  TGAAFIVCNYDPHGHIKN
         G  FI CNYDP G+  N
Subjt:  TGAAFIVCNYDPHGHIKN

XP_031479911.1 pathogenesis-related protein PRB1-3-like [Nymphaea colorata]1.1e-1236.59Show/hide
Query:  PTMLSPAQVGVGPIQWDENVATYAKEF----------------MGRTLHW--------------------FYDYATNSCISAK-------VVWKDSITIG
        P   S AQVGVGP+ W++ VA YA+ +                 G  L W                    +YDY TNSC S K       VVW++S+ +G
Subjt:  PTMLSPAQVGVGPIQWDENVATYAKEF----------------MGRTLHW--------------------FYDYATNSCISAK-------VVWKDSITIG

Query:  CAKPNCRTGAAFIVCNYDPHGHI
        CA+  C +GA FI+CNYDP+G+I
Subjt:  CAKPNCRTGAAFIVCNYDPHGHI

XP_031745022.1 pathogenesis-related protein 1 [Cucumis sativus]1.1e-1236.75Show/hide
Query:  AQVGVGPIQWDENVATYAKEF----------------MGRTLHW-------------------FYDYATNSCISAK-------VVWKDSITIGCAKPNCR
        A+VGVGP+ W+E VA YA+ +                 G  + W                   FY+Y TNSC+  K       VVW++S+ IGCAK  CR
Subjt:  AQVGVGPIQWDENVATYAKEF----------------MGRTLHW-------------------FYDYATNSCISAK-------VVWKDSITIGCAKPNCR

Query:  TGAAFIVCNYDPHGHIK
        +G  FI CNYDP G+I+
Subjt:  TGAAFIVCNYDPHGHIK

TrEMBL top hitse value%identityAlignment
A0A0A0K2D5 SCP domain-containing protein5.1e-1336.75Show/hide
Query:  AQVGVGPIQWDENVATYAKEF----------------MGRTLHW-------------------FYDYATNSCISAK-------VVWKDSITIGCAKPNCR
        A+VGVGP+ W+E VA YA+ +                 G  + W                   FY+Y TNSC+  K       VVW++S+ IGCAK  CR
Subjt:  AQVGVGPIQWDENVATYAKEF----------------MGRTLHW-------------------FYDYATNSCISAK-------VVWKDSITIGCAKPNCR

Query:  TGAAFIVCNYDPHGHIK
        +G  FI CNYDP G+I+
Subjt:  TGAAFIVCNYDPHGHIK

A0A0A0K7P0 SCP domain-containing protein8.7e-1338.98Show/hide
Query:  AQVGVGPIQWDENVATYAKEF----------------MGRTLHW-------------------FYDYATNSCISA------KVVWKDSITIGCAKPNC-R
        AQVGVGP+ WDE VA YA+++                 G  L W                   FYDYA+NSC+ +      +VVWK+S+ IGCAK  C  
Subjt:  AQVGVGPIQWDENVATYAKEF----------------MGRTLHW-------------------FYDYATNSCISA------KVVWKDSITIGCAKPNC-R

Query:  TGAAFIVCNYDPHGHIKN
         G  FI CNYDP G+  N
Subjt:  TGAAFIVCNYDPHGHIKN

A0A5A7SPB3 Pathogen-related protein 18.7e-1335.9Show/hide
Query:  AQVGVGPIQWDENVATYAKEF----------------MGRTLHW-------------------FYDYATNSCISAK-------VVWKDSITIGCAKPNCR
        AQVGVGP+ W++ VA YA ++                 G  + W                   FY+Y TNSC+  K       VVW++S+ IGCAK  C+
Subjt:  AQVGVGPIQWDENVATYAKEF----------------MGRTLHW-------------------FYDYATNSCISAK-------VVWKDSITIGCAKPNCR

Query:  TGAAFIVCNYDPHGHIK
        +G  FI+CNYDP G+I+
Subjt:  TGAAFIVCNYDPHGHIK

A0A5D3C4Q0 Basic form of pathogenesis-related protein 16.7e-1338.98Show/hide
Query:  AQVGVGPIQWDENVATYAKEF----------------MGRTLHW-------------------FYDYATNSCISA------KVVWKDSITIGCAKPNC-R
        AQVGVGP+ WDE VA YA+++                 G  L W                   FYDYA+NSC+ +      +VVWK+S+ IGCAK  C  
Subjt:  AQVGVGPIQWDENVATYAKEF----------------MGRTLHW-------------------FYDYATNSCISA------KVVWKDSITIGCAKPNC-R

Query:  TGAAFIVCNYDPHGHIKN
         G  FI CNYDP G+  N
Subjt:  TGAAFIVCNYDPHGHIKN

B2CZ52 Pathogen-related protein 11.9e-1235.9Show/hide
Query:  AQVGVGPIQWDENVATYAKEF----------------MGRTLHW-------------------FYDYATNSCISAK-------VVWKDSITIGCAKPNCR
        AQVGVGP+ W++ VA YA ++                 G  + W                   FY+Y TNSC+  K       VVW++S+ IGCAK  C+
Subjt:  AQVGVGPIQWDENVATYAKEF----------------MGRTLHW-------------------FYDYATNSCISAK-------VVWKDSITIGCAKPNCR

Query:  TGAAFIVCNYDPHGHIK
        +G  FI CNYDP G+I+
Subjt:  TGAAFIVCNYDPHGHIK

SwissProt top hitse value%identityAlignment
P04284 Pathogenesis-related leaf protein 61.3e-1034.51Show/hide
Query:  AQVGVGPIQWDENVATYAK--------------------------EFMGRTL--HWF-----YDYATNSCISAK-------VVWKDSITIGCAKPNCRTG
        AQVGVGP+ WD N+A+ A+                          +F GR     W      Y+YATN C+  K       VVW++S+ +GC +  C  G
Subjt:  AQVGVGPIQWDENVATYAK--------------------------EFMGRTL--HWF-----YDYATNSCISAK-------VVWKDSITIGCAKPNCRTG

Query:  AAFIVCNYDPHGH
          FI CNYDP G+
Subjt:  AAFIVCNYDPHGH

P11670 Basic form of pathogenesis-related protein 13.9e-1031.86Show/hide
Query:  QVGVGPIQWDENVATYAKEF------------------------------MGRTLHW-----FYDYATNSCIS------AKVVWKDSITIGCAKPNCRTG
        QVGVGP+ WD  +A YA+ +                               G    W     FYDY +NSC+        +VVW++S+ +GCA+     G
Subjt:  QVGVGPIQWDENVATYAKEF------------------------------MGRTLHW-----FYDYATNSCIS------AKVVWKDSITIGCAKPNCRTG

Query:  AAFIVCNYDPHGH
          FI CNYDP G+
Subjt:  AAFIVCNYDPHGH

Q04108 Pathogenesis-related leaf protein 41.3e-1034.51Show/hide
Query:  AQVGVGPIQWDENVATYAK--------------------------EFMGRTL--HWF-----YDYATNSCISAK-------VVWKDSITIGCAKPNCRTG
        AQVGVGP+ WD N+A+ A+                          +F GR     W      Y+YATN C+  K       VVW++S+ +GC +  C  G
Subjt:  AQVGVGPIQWDENVATYAK--------------------------EFMGRTL--HWF-----YDYATNSCISAK-------VVWKDSITIGCAKPNCRTG

Query:  AAFIVCNYDPHGH
          FI CNYDP G+
Subjt:  AAFIVCNYDPHGH

Q08697 Pathogenesis-related protein 1A13.9e-1031.09Show/hide
Query:  QVGVGPIQWDENVATYAKEF------------------------------MGRTLHW-----FYDYATNSCISAK-------VVWKDSITIGCAKPNCRT
        +VGVGP+ WD+ +A YA+ +                               G    W     +YDY +N+C   K       VVW+ S+ +GCA+  C +
Subjt:  QVGVGPIQWDENVATYAKEF------------------------------MGRTLHW-----FYDYATNSCISAK-------VVWKDSITIGCAKPNCRT

Query:  GAAFIVCNYDPHG-HIKNI
        G  FI CNYDP G +I N+
Subjt:  GAAFIVCNYDPHG-HIKNI

Q9ZNS4 Pathogenesis-related protein 12.1e-1132.76Show/hide
Query:  AQVGVGPIQWDENVATYAKEFMG------RTLH------------------------WF-----YDYATNSCIS-----AKVVWKDSITIGCAKPNCRTG
        +Q+GVGP+QWDE +A YA+ +        R +H                        W      Y+Y TN+C        +VVW++S+ +GCAK  C  G
Subjt:  AQVGVGPIQWDENVATYAKEFMG------RTLH------------------------WF-----YDYATNSCIS-----AKVVWKDSITIGCAKPNCRTG

Query:  AAFIVCNYDPHGHIKN
           I CNYDP G+  N
Subjt:  AAFIVCNYDPHGHIKN

Arabidopsis top hitse value%identityAlignment
AT2G14580.1 basic pathogenesis-related protein 11.5e-1232.76Show/hide
Query:  AQVGVGPIQWDENVATYAKEFMG------RTLH------------------------WF-----YDYATNSCIS-----AKVVWKDSITIGCAKPNCRTG
        +Q+GVGP+QWDE +A YA+ +        R +H                        W      Y+Y TN+C        +VVW++S+ +GCAK  C  G
Subjt:  AQVGVGPIQWDENVATYAKEFMG------RTLH------------------------WF-----YDYATNSCIS-----AKVVWKDSITIGCAKPNCRTG

Query:  AAFIVCNYDPHGHIKN
           I CNYDP G+  N
Subjt:  AAFIVCNYDPHGHIKN

AT2G19990.1 pathogenesis-related protein-1-like1.3e-0827.59Show/hide
Query:  AQVGVGPIQWDENVATYAKEFMGR------------------------------TLHWF-----YDYATNSCIS-------AKVVWKDSITIGCAKPNCR
        A VGVGP+ W+E +ATYA+ +                                 T +W      YDY +N+C          ++VW+DS+ +GCA   C+
Subjt:  AQVGVGPIQWDENVATYAKEFMGR------------------------------TLHWF-----YDYATNSCIS-------AKVVWKDSITIGCAKPNCR

Query:  TGA-AFIVCNYDPHGH
             +++C+YDP G+
Subjt:  TGA-AFIVCNYDPHGH

AT3G19690.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein1.8e-1028.45Show/hide
Query:  QVGVGPIQWDENVATYAKEFMGRTLH------------------------------W-----FYDYATNSCIS---------AKVVWKDSITIGCAKPNC
        +VG+ P+ WD+ VA YA  +  + ++                              W     +YDY +N+C            +VVWK+++ +GCAK  C
Subjt:  QVGVGPIQWDENVATYAKEFMGRTLH------------------------------W-----FYDYATNSCIS---------AKVVWKDSITIGCAKPNC

Query:  RTGAAFIVCNYDPHGH
         +G  FI CNYDP G+
Subjt:  RTGAAFIVCNYDPHGH

AT4G33720.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein1.1e-1233.91Show/hide
Query:  AQVGVGPIQWDENVATYAKEF----------------MGRTLHWF-------------------YDYATNSCISAK-------VVWKDSITIGCAKPNCR
        A+VGVGP++WDE VA YA+ +                 G  + W                    YDY +N+C   K       VVW++S  +GCAK  C 
Subjt:  AQVGVGPIQWDENVATYAKEF----------------MGRTLHWF-------------------YDYATNSCISAK-------VVWKDSITIGCAKPNCR

Query:  TGAAFIVCNYDPHGH
         G  FI CNYDP G+
Subjt:  TGAAFIVCNYDPHGH

AT4G33730.1 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein1.3e-0828.1Show/hide
Query:  PTMLSPAQVGVGPIQWDENVATYAKEF-----------------MGRTLHW-------------------FYDYATNSCIS------AKVVWKDSITIGC
        P   + A V V P++WD  +AT A+++                  G  L +                   +YD+ +NSC         +VVW+ S  +GC
Subjt:  PTMLSPAQVGVGPIQWDENVATYAKEF-----------------MGRTLHW-------------------FYDYATNSCIS------AKVVWKDSITIGC

Query:  AKPNCRTGAAFIVCNYDPHGH
         K  C  GA+ +VCNYDP G+
Subjt:  AKPNCRTGAAFIVCNYDPHGH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAATGCCCACAATGCTGAGTCCTGCCCAAGTTGGTGTTGGGCCTATCCAATGGGATGAGAATGTGGCAACTTATGCAAAGGAATTTATGGGGAGAACACTGCATTG
GTTCTATGACTACGCCACCAACTCATGCATTTCTGCCAAAGTGGTCTGGAAAGACTCCATAACAATTGGGTGTGCAAAACCCAACTGTAGAACTGGTGCTGCATTCATCG
TCTGTAACTATGACCCGCATGGCCATATTAAAAACATATCAATTTTGGTAGAATCAAATTCGATTTTGAAACAT
mRNA sequenceShow/hide mRNA sequence
CTCAAGAAGAACTCACCTCAGGACTATGTCAATGCCCACAATGCTGAGTCCTGCCCAAGTTGGTGTTGGGCCTATCCAATGGGATGAGAATGTGGCAACTTATGCAAAGG
AATTTATGGGGAGAACACTGCATTGGTTCTATGACTACGCCACCAACTCATGCATTTCTGCCAAAGTGGTCTGGAAAGACTCCATAACAATTGGGTGTGCAAAACCCAAC
TGTAGAACTGGTGCTGCATTCATCGTCTGTAACTATGACCCGCATGGCCATATTAAAAACATATCAATTTTGGTAGAATCAAATTCGATTTTGAAACAT
Protein sequenceShow/hide protein sequence
MSMPTMLSPAQVGVGPIQWDENVATYAKEFMGRTLHWFYDYATNSCISAKVVWKDSITIGCAKPNCRTGAAFIVCNYDPHGHIKNISILVESNSILKH