; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CaUC04G067540 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC04G067540
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
Description30S ribosomal protein S3, chloroplastic
Genome locationCiama_Chr04:2654679..2662768
RNA-Seq ExpressionCaUC04G067540
SyntenyCaUC04G067540
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0015934 - large ribosomal subunit (cellular component)
GO:0022627 - cytosolic small ribosomal subunit (cellular component)
GO:0019843 - rRNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR036419 - Ribosomal protein S3, C-terminal domain superfamily
IPR036394 - Ribosomal protein L22/L17 superfamily
IPR023575 - Ribosomal protein S19/S15, superfamily
IPR020934 - Ribosomal protein S19 conserved site
IPR018280 - Ribosomal protein S3, conserved site
IPR015946 - K homology domain-like, alpha/beta
IPR009019 - K homology domain superfamily, prokaryotic type
IPR005732 - Ribosomal protein S19, bacterial-type
IPR005727 - Ribosomal protein L22, bacterial/chloroplast-type
IPR005704 - Ribosomal protein S3, bacterial-type
IPR004044 - K Homology domain, type 2
IPR002222 - Ribosomal protein S19/S15
IPR001351 - Ribosomal protein S3, C-terminal
IPR001063 - Ribosomal protein L22/L17


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GFP94333.1 30S ribosomal protein s3 chloroplastic [Phtheirospermum japonicum]1.9e-14375.35Show/hide
Query:  IKKNRYTREVYALGQHICMSPHKARRVIDQIRGRSYEETMMILELMPYRACYPILKLVYSAAANASHNMGFNERDLVISKAEVNQGTTVKKLKPRARGRS
        ++K +  +EVYALG+HI +S  KARRVIDQIRGRSYEET+MILELMPYRACYPI KL YSAAANA++NMG  E +LVISKAEVN+GTT KKLKPRARGRS
Subjt:  IKKNRYTREVYALGQHICMSPHKARRVIDQIRGRSYEETMMILELMPYRACYPILKLVYSAAANASHNMGFNERDLVISKAEVNQGTTVKKLKPRARGRS

Query:  YPIKRPTCSITIVLKNTSLNEEEFKRYQYTILDLNKPGEWITKEKSTDMTCYDILGATQGHHSLWFAHPQKYSEGLQEDQKIRDCIRNYVQKNMRIFSGV
        Y IKR TC ITIV+K+ SL+E E       I  L  P  W    K T M   D+LG TQ HHSLWFA PQ YSEGLQEDQKIRD I+NYVQKNMRI SG 
Subjt:  YPIKRPTCSITIVLKNTSLNEEEFKRYQYTILDLNKPGEWITKEKSTDMTCYDILGATQGHHSLWFAHPQKYSEGLQEDQKIRDCIRNYVQKNMRIFSGV

Query:  EGIARIEIQKRIDLIQVIIFMGFPKLLIEGGSRKIEELQMNVQKELNSGNRKLNIAITRIGNPYGHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQAGT
        EGIARIEI+KRIDLIQV+IFMGFPKLLIE   R IEELQMN+QKE +  NRKLNIAI RI  PY +PNILAEFIAGQLKNRVSFRKAMKKAIELTEQ  T
Subjt:  EGIARIEIQKRIDLIQVIIFMGFPKLLIEGGSRKIEELQMNVQKELNSGNRKLNIAITRIGNPYGHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQAGT

Query:  KGIQIQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCCYPVRTIYGVLGIKIWIFVDEQ
        KGIQ+QI+G ID KEIARVEWIREGRVPLQTIRAKIDYC Y VRTIYGVLGIKIWIF+D++
Subjt:  KGIQIQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCCYPVRTIYGVLGIKIWIFVDEQ

KAF3783044.1 30S ribosomal protein S3 [Nymphaea thermarum]4.1e-13068.98Show/hide
Query:  IKKNRYTREVYALGQHICMSPHKARRVIDQIRGRSYEETMMILELMPYRACYPILKLVYSAAANASHNMGFNERDLVISKAEVNQGTTVKKLKPRARGRS
        IKK   T E+ AL +HI MS  KARRVIDQIRG SYE+T+MILELMPYRACYPI KLVYSAAANASHN G  E DL ISKAEVN+G  VK+LKP+ARGRS
Subjt:  IKKNRYTREVYALGQHICMSPHKARRVIDQIRGRSYEETMMILELMPYRACYPILKLVYSAAANASHNMGFNERDLVISKAEVNQGTTVKKLKPRARGRS

Query:  YPIKRPTCSITIVLKNTSLNEEEFKRYQYTILDLNKPGEWITKEKSTDMTCYDILGATQGHHSLWFAHPQKYSEGLQEDQKIRDCIRNYVQKNMRIFSGV
        YPIKRPTC ITIV     +N   F+                             LG TQ H S WFA P+ YS+GLQED+KIRDCI+NYVQK+MRI SG 
Subjt:  YPIKRPTCSITIVLKNTSLNEEEFKRYQYTILDLNKPGEWITKEKSTDMTCYDILGATQGHHSLWFAHPQKYSEGLQEDQKIRDCIRNYVQKNMRIFSGV

Query:  EGIARIEIQKRIDLIQVIIFMGFPKLLIEGGSRKIEELQMNVQKELNSGNRKLNIAITRIGNPYGHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQAGT
        EGIARI+I+KRIDLIQVII +GF  +LIEG +R IEELQ NVQK  +S NR+LNIAI R+  PYG PNILAE+IA QLKNRVSFRKAMKKAIEL EQA  
Subjt:  EGIARIEIQKRIDLIQVIIFMGFPKLLIEGGSRKIEELQMNVQKELNSGNRKLNIAITRIGNPYGHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQAGT

Query:  KGIQIQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCCYPVRTIYGVLGIKIWIFVDEQ
        KGIQ+QIAGR++G EIARVEWIREGRVPLQTIR KIDYC YPVRTIYGVLGIKIWIF+DE+
Subjt:  KGIQIQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCCYPVRTIYGVLGIKIWIFVDEQ

KAF5753265.1 putative ribosomal protein L22/L17 [Helianthus annuus]1.6e-15078.09Show/hide
Query:  NRYTREVYALGQHICMSPHKARRVIDQIRGRSYEETMMILELMPYRACYPILKLVYSAAANASHNMGFNERDLVISKAEVNQGTTVKKLKPRARGRSYPI
        N+ T EVYALGQHI MS HKARRVIDQIRGRSYEET+MILELMPYRACYPI KLVYSAAANAS NMG NE +LVISKAEVN+GT +K+LKPRARGRS+ I
Subjt:  NRYTREVYALGQHICMSPHKARRVIDQIRGRSYEETMMILELMPYRACYPILKLVYSAAANASHNMGFNERDLVISKAEVNQGTTVKKLKPRARGRSYPI

Query:  KRPTCSITIVLKNTSLNEEEFKRYQYTILDLNKPGEWITKEKSTDMTCYDILGATQGHHSLWFAHPQKYSEGLQEDQKIRDCIRNYVQKNMRIFSGVEGI
        ++PTC ITIV+K+ SL+E          +D +       K+K T M+ YDILG TQGHHSLWFA P+ YSEGLQEDQKIR+ I+NYVQKNM+  SGVEGI
Subjt:  KRPTCSITIVLKNTSLNEEEFKRYQYTILDLNKPGEWITKEKSTDMTCYDILGATQGHHSLWFAHPQKYSEGLQEDQKIRDCIRNYVQKNMRIFSGVEGI

Query:  ARIEIQKRIDLIQVIIFMGFPKLLIEGGSRKIEELQMNVQKELNSGNRKLNIAITRIGNPYGHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQAGTKGI
        ARIEIQKRIDLIQ+II+MGFPK+LIE   R IEELQMN+QKE NS NRKLNIAITRI  PYG+PNILAEFIAGQLKNRVSFRKAMKKAIELTEQA TKGI
Subjt:  ARIEIQKRIDLIQVIIFMGFPKLLIEGGSRKIEELQMNVQKELNSGNRKLNIAITRIGNPYGHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQAGTKGI

Query:  QIQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCCYPVRTIYGVLGIKIWIFVD
        Q+QIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYC Y VRTIYGVLGIKIWIF++
Subjt:  QIQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCCYPVRTIYGVLGIKIWIFVD

PLY81697.1 hypothetical protein LSAT_3X22620 [Lactuca sativa]2.1e-15079.05Show/hide
Query:  NRYTREVYALGQHICMSPHKARRVIDQIRGRSYEETMMILELMPYRACYPILKLVYSAAANASHNMGFNERDLVISKAEVNQGTTVKKLKPRARGRSYPI
        N+ T EVYALGQHI MS HKARRVIDQIRGRSYEET+MILELMPYRACYPI KLVYSAAANAS NMG NE +LVISKAEVN+GT VK+LKPRARGRS+ I
Subjt:  NRYTREVYALGQHICMSPHKARRVIDQIRGRSYEETMMILELMPYRACYPILKLVYSAAANASHNMGFNERDLVISKAEVNQGTTVKKLKPRARGRSYPI

Query:  KRPTCSITIVLKNTSLNEEEFKRYQYT--ILDLNKPGEWITKEKSTDMTCYDILGATQGHHSLWFAHPQKYSEGLQEDQKIRDCIRNYVQKNMRIFSGVE
        ++PTC ITIV+K+ SL+E     Y  T  I    KP    +K+K T M+ YDILG TQGHHSLWFA P+ YSEGLQED+KIR  I+NYVQKNM+  SGVE
Subjt:  KRPTCSITIVLKNTSLNEEEFKRYQYT--ILDLNKPGEWITKEKSTDMTCYDILGATQGHHSLWFAHPQKYSEGLQEDQKIRDCIRNYVQKNMRIFSGVE

Query:  GIARIEIQKRIDLIQVIIFMGFPKLLIEGGSRKIEELQMNVQKELNSGNRKLNIAITRIGNPYGHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQAGTK
        GIARIEIQKRIDLIQ+II+MGFPK+LIE   R IEELQMN+QKE +S NRKLNIAITRI  PYG+PNILAEFIAGQLKNRVSFRKAMKKAIELTEQA TK
Subjt:  GIARIEIQKRIDLIQVIIFMGFPKLLIEGGSRKIEELQMNVQKELNSGNRKLNIAITRIGNPYGHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQAGTK

Query:  GIQIQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCCYPVRTIYGVLGIKIWIFVD
        GIQ+QIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCCY VRTIYGVLGIKIWIF+D
Subjt:  GIQIQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCCYPVRTIYGVLGIKIWIFVD

RWR97894.1 putative ribosomal protein L22/L17 plastid [Cinnamomum micranthum f. kanehirae]2.5e-13268.72Show/hide
Query:  RNFRGHIKKNRYTR----EVYALGQHICMSPHKARRVIDQIRGRSYEETMMILELMPYRACYPILKLVYSAAANASHNMGFNERDLVISKAEVNQGTTVK
        R ++  +KK +  R    +V AL Q ICMS HKARRVIDQIRG SYE+T+M+LELMPYRA YPI KLVYSAAANASHN  FNE D VISKAEVN GT VK
Subjt:  RNFRGHIKKNRYTR----EVYALGQHICMSPHKARRVIDQIRGRSYEETMMILELMPYRACYPILKLVYSAAANASHNMGFNERDLVISKAEVNQGTTVK

Query:  KLKPRARGRSYPIKRPTCSITIVLKNTSLNEEEFKRYQYTILDLNKPGEWITKEKSTDMTCYDI-LGATQGHHSLWFAHPQKYSEGLQEDQKIRDCIRNY
        KLKPRARGRSYPI+RP C I IVLK++S  + +   +  T  ++ + GE   K+    +      LG  Q H SLWFA P+ Y  GLQED+KIRDCI+ Y
Subjt:  KLKPRARGRSYPIKRPTCSITIVLKNTSLNEEEFKRYQYTILDLNKPGEWITKEKSTDMTCYDI-LGATQGHHSLWFAHPQKYSEGLQEDQKIRDCIRNY

Query:  VQKNMRIFSGVE--GIARIEIQKRIDLIQVIIFMGFPKLLIEGGSRKIEELQMNVQKELNSGNRKLNIAITRIGNPYGHPNILAEFIAGQLKNRVSFRKA
        VQKN+R+ S  E  GIA IEIQK++DLIQVII++GFP LLIEG +R IEELQ+NVQK L+S NR+LNIAITR+  PYG PNILAE+IA QLKNRVSFRKA
Subjt:  VQKNMRIFSGVE--GIARIEIQKRIDLIQVIIFMGFPKLLIEGGSRKIEELQMNVQKELNSGNRKLNIAITRIGNPYGHPNILAEFIAGQLKNRVSFRKA

Query:  MKKAIELTEQAGTKGIQIQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCCYPVRTIYGVLGIKIWIFVDEQ
        MKKAIELTEQA TKGIQ++IAGRIDGKEIARVEWIREGRVPLQTIRAKID+C Y VRT YG LGIKIWIFVDEQ
Subjt:  MKKAIELTEQAGTKGIQIQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCCYPVRTIYGVLGIKIWIFVDEQ

TrEMBL top hitse value%identityAlignment
A0A1Y3BUU3 Putative ribosomal protein L22/L177.7e-15178.09Show/hide
Query:  NRYTREVYALGQHICMSPHKARRVIDQIRGRSYEETMMILELMPYRACYPILKLVYSAAANASHNMGFNERDLVISKAEVNQGTTVKKLKPRARGRSYPI
        N+ T EVYALGQHI MS HKARRVIDQIRGRSYEET+MILELMPYRACYPI KLVYSAAANAS NMG NE +LVISKAEVN+GT +K+LKPRARGRS+ I
Subjt:  NRYTREVYALGQHICMSPHKARRVIDQIRGRSYEETMMILELMPYRACYPILKLVYSAAANASHNMGFNERDLVISKAEVNQGTTVKKLKPRARGRSYPI

Query:  KRPTCSITIVLKNTSLNEEEFKRYQYTILDLNKPGEWITKEKSTDMTCYDILGATQGHHSLWFAHPQKYSEGLQEDQKIRDCIRNYVQKNMRIFSGVEGI
        ++PTC ITIV+K+ SL+E          +D +       K+K T M+ YDILG TQGHHSLWFA P+ YSEGLQEDQKIR+ I+NYVQKNM+  SGVEGI
Subjt:  KRPTCSITIVLKNTSLNEEEFKRYQYTILDLNKPGEWITKEKSTDMTCYDILGATQGHHSLWFAHPQKYSEGLQEDQKIRDCIRNYVQKNMRIFSGVEGI

Query:  ARIEIQKRIDLIQVIIFMGFPKLLIEGGSRKIEELQMNVQKELNSGNRKLNIAITRIGNPYGHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQAGTKGI
        ARIEIQKRIDLIQ+II+MGFPK+LIE   R IEELQMN+QKE NS NRKLNIAITRI  PYG+PNILAEFIAGQLKNRVSFRKAMKKAIELTEQA TKGI
Subjt:  ARIEIQKRIDLIQVIIFMGFPKLLIEGGSRKIEELQMNVQKELNSGNRKLNIAITRIGNPYGHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQAGTKGI

Query:  QIQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCCYPVRTIYGVLGIKIWIFVD
        Q+QIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYC Y VRTIYGVLGIKIWIF++
Subjt:  QIQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCCYPVRTIYGVLGIKIWIFVD

A0A251THC5 Putative ribosomal protein L22/L178.2e-14577.97Show/hide
Query:  NRYTREVYALGQHICMSPHKARRVIDQIRGRSYEETMMILELMPYRACYPILKLVYSAAANASHNMGFNERDLVISKAEVNQGTTVKKLKPRARGRSYPI
        N+ T EVYALGQHI MS HKARRVIDQIRGRSYEET+MILELMPYRACYPI KLVYSAAANAS NMG NE +LVISKAEVN+GT +K+LKPRARGRS+ I
Subjt:  NRYTREVYALGQHICMSPHKARRVIDQIRGRSYEETMMILELMPYRACYPILKLVYSAAANASHNMGFNERDLVISKAEVNQGTTVKKLKPRARGRSYPI

Query:  KRPTCSITIVLKNTSLNEEEFKRYQYTILDLNKPGEWITKEKSTDMTCYDILGATQGHHSLWFAHPQKYSEGLQEDQKIRDCIRNYVQKNMRIFSGVEGI
        ++PTC ITIV+K+ SL+E          +D +       K+K T M+ YDILG TQGHHSLWFA P+ YSEGLQEDQKIR+ I+NYVQKNM+  SGVEGI
Subjt:  KRPTCSITIVLKNTSLNEEEFKRYQYTILDLNKPGEWITKEKSTDMTCYDILGATQGHHSLWFAHPQKYSEGLQEDQKIRDCIRNYVQKNMRIFSGVEGI

Query:  ARIEIQKRIDLIQVIIFMGFPKLLIEGGSRKIEELQMNVQKELNSGNRKLNIAITRIGNPYGHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQAGTKGI
        ARIEIQKRIDLIQ+II+MGFPK+LIE   R IEELQMN+QKE NS NRKLNIAITRI  PYG+PNILAEFIAGQLKNRVSFRKAMKKAIELTEQA TKGI
Subjt:  ARIEIQKRIDLIQVIIFMGFPKLLIEGGSRKIEELQMNVQKELNSGNRKLNIAITRIGNPYGHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQAGTKGI

Query:  QIQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCCYPVRTIYG
        Q+QIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYC Y VRTIYG
Subjt:  QIQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCCYPVRTIYG

A0A251TQ23 Putative ribosomal protein L22/L172.4e-14478.3Show/hide
Query:  MSPHKARRVIDQIRGRSYEETMMILELMPYRACYPILKLVYSAAANASHNMGFNERDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKNTS
        MS HKARRVIDQIRGRSYEET+MILELMPYRACYPI KLVYSAAANAS NMG NE +LVISKAEVN+GT +K+LKPRARGRS+ I++PTC ITIV+K+ S
Subjt:  MSPHKARRVIDQIRGRSYEETMMILELMPYRACYPILKLVYSAAANASHNMGFNERDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKNTS

Query:  LNEEEFKRYQYTILDLNKPGEWITKEKSTDMTCYDILGATQGHHSLWFAHPQKYSEGLQEDQKIRDCIRNYVQKNMRIFSGVEGIARIEIQKRIDLIQVI
        L+E          +D +       K+K T M+ YDILG TQGHHSLWFA P+ YSEGLQEDQKIR+ I+NYVQKNM+  SGVEGIARIEIQKRIDLIQ+I
Subjt:  LNEEEFKRYQYTILDLNKPGEWITKEKSTDMTCYDILGATQGHHSLWFAHPQKYSEGLQEDQKIRDCIRNYVQKNMRIFSGVEGIARIEIQKRIDLIQVI

Query:  IFMGFPKLLIEGGSRKIEELQMNVQKELNSGNRKLNIAITRIGNPYGHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQAGTKGIQIQIAGRIDGKEIAR
        I+MGFPK+LIE   R IEELQMN+QKE NS NRKLNIAITRI  PYG+PNILAEFIAGQLKNRVSFRKAMKKAIELTEQA TKGIQ+QIAGRIDGKEIAR
Subjt:  IFMGFPKLLIEGGSRKIEELQMNVQKELNSGNRKLNIAITRIGNPYGHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQAGTKGIQIQIAGRIDGKEIAR

Query:  VEWIREGRVPLQTIRAKIDYCCYPVRTIYGVLGIKIWIFVD
        VEWIREGRVPLQTIRAKIDYC Y VRTIYGVLGIKIWIF++
Subjt:  VEWIREGRVPLQTIRAKIDYCCYPVRTIYGVLGIKIWIFVD

A0A2J6L339 KH type-2 domain-containing protein1.0e-15079.05Show/hide
Query:  NRYTREVYALGQHICMSPHKARRVIDQIRGRSYEETMMILELMPYRACYPILKLVYSAAANASHNMGFNERDLVISKAEVNQGTTVKKLKPRARGRSYPI
        N+ T EVYALGQHI MS HKARRVIDQIRGRSYEET+MILELMPYRACYPI KLVYSAAANAS NMG NE +LVISKAEVN+GT VK+LKPRARGRS+ I
Subjt:  NRYTREVYALGQHICMSPHKARRVIDQIRGRSYEETMMILELMPYRACYPILKLVYSAAANASHNMGFNERDLVISKAEVNQGTTVKKLKPRARGRSYPI

Query:  KRPTCSITIVLKNTSLNEEEFKRYQYT--ILDLNKPGEWITKEKSTDMTCYDILGATQGHHSLWFAHPQKYSEGLQEDQKIRDCIRNYVQKNMRIFSGVE
        ++PTC ITIV+K+ SL+E     Y  T  I    KP    +K+K T M+ YDILG TQGHHSLWFA P+ YSEGLQED+KIR  I+NYVQKNM+  SGVE
Subjt:  KRPTCSITIVLKNTSLNEEEFKRYQYT--ILDLNKPGEWITKEKSTDMTCYDILGATQGHHSLWFAHPQKYSEGLQEDQKIRDCIRNYVQKNMRIFSGVE

Query:  GIARIEIQKRIDLIQVIIFMGFPKLLIEGGSRKIEELQMNVQKELNSGNRKLNIAITRIGNPYGHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQAGTK
        GIARIEIQKRIDLIQ+II+MGFPK+LIE   R IEELQMN+QKE +S NRKLNIAITRI  PYG+PNILAEFIAGQLKNRVSFRKAMKKAIELTEQA TK
Subjt:  GIARIEIQKRIDLIQVIIFMGFPKLLIEGGSRKIEELQMNVQKELNSGNRKLNIAITRIGNPYGHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQAGTK

Query:  GIQIQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCCYPVRTIYGVLGIKIWIFVD
        GIQ+QIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCCY VRTIYGVLGIKIWIF+D
Subjt:  GIQIQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCCYPVRTIYGVLGIKIWIFVD

A0A443Q4D8 Putative ribosomal protein L22/L17 plastid1.2e-13268.72Show/hide
Query:  RNFRGHIKKNRYTR----EVYALGQHICMSPHKARRVIDQIRGRSYEETMMILELMPYRACYPILKLVYSAAANASHNMGFNERDLVISKAEVNQGTTVK
        R ++  +KK +  R    +V AL Q ICMS HKARRVIDQIRG SYE+T+M+LELMPYRA YPI KLVYSAAANASHN  FNE D VISKAEVN GT VK
Subjt:  RNFRGHIKKNRYTR----EVYALGQHICMSPHKARRVIDQIRGRSYEETMMILELMPYRACYPILKLVYSAAANASHNMGFNERDLVISKAEVNQGTTVK

Query:  KLKPRARGRSYPIKRPTCSITIVLKNTSLNEEEFKRYQYTILDLNKPGEWITKEKSTDMTCYDI-LGATQGHHSLWFAHPQKYSEGLQEDQKIRDCIRNY
        KLKPRARGRSYPI+RP C I IVLK++S  + +   +  T  ++ + GE   K+    +      LG  Q H SLWFA P+ Y  GLQED+KIRDCI+ Y
Subjt:  KLKPRARGRSYPIKRPTCSITIVLKNTSLNEEEFKRYQYTILDLNKPGEWITKEKSTDMTCYDI-LGATQGHHSLWFAHPQKYSEGLQEDQKIRDCIRNY

Query:  VQKNMRIFSGVE--GIARIEIQKRIDLIQVIIFMGFPKLLIEGGSRKIEELQMNVQKELNSGNRKLNIAITRIGNPYGHPNILAEFIAGQLKNRVSFRKA
        VQKN+R+ S  E  GIA IEIQK++DLIQVII++GFP LLIEG +R IEELQ+NVQK L+S NR+LNIAITR+  PYG PNILAE+IA QLKNRVSFRKA
Subjt:  VQKNMRIFSGVE--GIARIEIQKRIDLIQVIIFMGFPKLLIEGGSRKIEELQMNVQKELNSGNRKLNIAITRIGNPYGHPNILAEFIAGQLKNRVSFRKA

Query:  MKKAIELTEQAGTKGIQIQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCCYPVRTIYGVLGIKIWIFVDEQ
        MKKAIELTEQA TKGIQ++IAGRIDGKEIARVEWIREGRVPLQTIRAKID+C Y VRT YG LGIKIWIFVDEQ
Subjt:  MKKAIELTEQAGTKGIQIQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCCYPVRTIYGVLGIKIWIFVDEQ

SwissProt top hitse value%identityAlignment
A0ZZ73 30S ribosomal protein S3, chloroplastic7.0e-10188.41Show/hide
Query:  LGATQGHHSLWFAHPQKYSEGLQEDQKIRDCIRNYVQKNMRIFSGVEGIARIEIQKRIDLIQVIIFMGFPKLLIEGGSRKIEELQMNVQKELNSGNRKLN
        LG TQ HHSLWFA P+KYSEGLQED+KIRDCI+NYVQKN R+ SGVEGIARIEIQKR+DLIQVII+MGFPKLLIE   RK+EELQMNVQKELN  NRKLN
Subjt:  LGATQGHHSLWFAHPQKYSEGLQEDQKIRDCIRNYVQKNMRIFSGVEGIARIEIQKRIDLIQVIIFMGFPKLLIEGGSRKIEELQMNVQKELNSGNRKLN

Query:  IAITRIGNPYGHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQAGTKGIQIQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCCYPVRTIYGVLGIKI
        IAITRIGNPYGHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQA TKGIQIQIAGRIDGKEIARVEWIREGRVPLQTI AKI+YC Y VRTIYGVLGIKI
Subjt:  IAITRIGNPYGHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQAGTKGIQIQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCCYPVRTIYGVLGIKI

Query:  WIFVDEQ
        WIF+DE+
Subjt:  WIFVDEQ

A6MM75 30S ribosomal protein S3, chloroplastic4.5e-10088.89Show/hide
Query:  LGATQGHHSLWFAHPQKYSEGLQEDQKIRDCIRNYVQKNMRIFSGVEGIARIEIQKRIDLIQVIIFMGFPKLLIEGGSRKIEELQMNVQKELNSGNRKLN
        LG TQGHHSLWFA P+ YSEGLQEDQKIRDCI+NYVQKNMRI SG EGIARIEIQKRIDLIQVII+MGFPKLLIEG  R +EELQ+NVQKE NS NRKLN
Subjt:  LGATQGHHSLWFAHPQKYSEGLQEDQKIRDCIRNYVQKNMRIFSGVEGIARIEIQKRIDLIQVIIFMGFPKLLIEGGSRKIEELQMNVQKELNSGNRKLN

Query:  IAITRIGNPYGHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQAGTKGIQIQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCCYPVRTIYGVLGIKI
        IAITRI  PYG PNILAEFIAGQLKNRVSFRKAMKKAIELTEQA TKGIQIQIAGRIDGKEIARVEWIREGRVPLQTIRAKI YC Y VRTIYGVLGIKI
Subjt:  IAITRIGNPYGHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQAGTKGIQIQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCCYPVRTIYGVLGIKI

Query:  WIFVDEQ
        WIFVDE+
Subjt:  WIFVDEQ

Q0ZIY0 30S ribosomal protein S3, chloroplastic5.4e-10188.41Show/hide
Query:  LGATQGHHSLWFAHPQKYSEGLQEDQKIRDCIRNYVQKNMRIFSGVEGIARIEIQKRIDLIQVIIFMGFPKLLIEGGSRKIEELQMNVQKELNSGNRKLN
        LG TQGHHSLWFA P+ YS+GLQEDQKIRDCI+NYVQKN+RI SGVEGIARIEIQKRIDLIQVII+MGFPKLL+EG  R+IEELQMNVQKELN  NRKLN
Subjt:  LGATQGHHSLWFAHPQKYSEGLQEDQKIRDCIRNYVQKNMRIFSGVEGIARIEIQKRIDLIQVIIFMGFPKLLIEGGSRKIEELQMNVQKELNSGNRKLN

Query:  IAITRIGNPYGHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQAGTKGIQIQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCCYPVRTIYGVLGIKI
        IAITRI  PYGHPNILAEFIAGQL+NRVSFRKA+KKAIELTEQA TKGIQ+QIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYC Y VRTIYGVLGIKI
Subjt:  IAITRIGNPYGHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQAGTKGIQIQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCCYPVRTIYGVLGIKI

Query:  WIFVDEQ
        WIFVDE+
Subjt:  WIFVDEQ

Q2L946 30S ribosomal protein S3, chloroplastic7.0e-10188.41Show/hide
Query:  LGATQGHHSLWFAHPQKYSEGLQEDQKIRDCIRNYVQKNMRIFSGVEGIARIEIQKRIDLIQVIIFMGFPKLLIEGGSRKIEELQMNVQKELNSGNRKLN
        LG TQ HHSLWFA P+KYSEGLQED+KIRDCI+NYVQKN R+ SGVEGIARIEIQKR+DLIQVII+MGFPKLLIE   RK+EELQMNVQKELN  NRKLN
Subjt:  LGATQGHHSLWFAHPQKYSEGLQEDQKIRDCIRNYVQKNMRIFSGVEGIARIEIQKRIDLIQVIIFMGFPKLLIEGGSRKIEELQMNVQKELNSGNRKLN

Query:  IAITRIGNPYGHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQAGTKGIQIQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCCYPVRTIYGVLGIKI
        IAITRIGNPYGHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQA TKGIQIQIAGRIDGKEIARVEWIREGRVPLQTI AKI+YC Y VRTIYGVLGIKI
Subjt:  IAITRIGNPYGHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQAGTKGIQIQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCCYPVRTIYGVLGIKI

Query:  WIFVDEQ
        WIF+DE+
Subjt:  WIFVDEQ

Q4VZN0 30S ribosomal protein S3, chloroplastic5.2e-11295.65Show/hide
Query:  LGATQGHHSLWFAHPQKYSEGLQEDQKIRDCIRNYVQKNMRIFSGVEGIARIEIQKRIDLIQVIIFMGFPKLLIEGGSRKIEELQMNVQKELNSGNRKLN
        LGATQGHHSLWFAHP+KYSEGLQEDQKIRDCI+NYVQKNMRIFSGVEGIARIEIQKRIDLIQVIIFMGFPKL+I+ GSRKIEELQ+NVQKE NSGNRKLN
Subjt:  LGATQGHHSLWFAHPQKYSEGLQEDQKIRDCIRNYVQKNMRIFSGVEGIARIEIQKRIDLIQVIIFMGFPKLLIEGGSRKIEELQMNVQKELNSGNRKLN

Query:  IAITRIGNPYGHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQAGTKGIQIQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCCYPVRTIYGVLGIKI
        IAITRIGNPYGHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQAGTKGIQ+QIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCCYPVRTIYG+LGIKI
Subjt:  IAITRIGNPYGHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQAGTKGIQIQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCCYPVRTIYGVLGIKI

Query:  WIFVDEQ
        WIFVDEQ
Subjt:  WIFVDEQ

Arabidopsis top hitse value%identityAlignment
AT1G52370.1 Ribosomal protein L22p/L17e family protein1.5e-1329.94Show/hide
Query:  REVYALGQHICMSPHKARRVIDQIRGRSYEETMMILELMPYRACYPILKLVYSAAANASHNMGFNERDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPT
        ++V A+ + I  SP K   V   +RG   E+ +M L++   RA   + +++++A ANA+HN G +   L++++A V +G   KK+   A+GRS  I  P 
Subjt:  REVYALGQHICMSPHKARRVIDQIRGRSYEETMMILELMPYRACYPILKLVYSAAANASHNMGFNERDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPT

Query:  CSITIVLKNTSLNEE-EFKRYQ-YTILDLNKPGEWITKEKSTDMTCYDILGATQGHH
        C +T++++ T+  EE E  R + +    LNK    +   K  + +       T+G+H
Subjt:  CSITIVLKNTSLNEE-EFKRYQ-YTILDLNKPGEWITKEKSTDMTCYDILGATQGHH

AT1G52370.2 Ribosomal protein L22p/L17e family protein1.5e-1329.94Show/hide
Query:  REVYALGQHICMSPHKARRVIDQIRGRSYEETMMILELMPYRACYPILKLVYSAAANASHNMGFNERDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPT
        ++V A+ + I  SP K   V   +RG   E+ +M L++   RA   + +++++A ANA+HN G +   L++++A V +G   KK+   A+GRS  I  P 
Subjt:  REVYALGQHICMSPHKARRVIDQIRGRSYEETMMILELMPYRACYPILKLVYSAAANASHNMGFNERDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPT

Query:  CSITIVLKNTSLNEE-EFKRYQ-YTILDLNKPGEWITKEKSTDMTCYDILGATQGHH
        C +T++++ T+  EE E  R + +    LNK    +   K  + +       T+G+H
Subjt:  CSITIVLKNTSLNEE-EFKRYQ-YTILDLNKPGEWITKEKSTDMTCYDILGATQGHH

ATCG00800.1 structural constituent of ribosome7.2e-10186.96Show/hide
Query:  LGATQGHHSLWFAHPQKYSEGLQEDQKIRDCIRNYVQKNMRIFSGVEGIARIEIQKRIDLIQVIIFMGFPKLLIEGGSRKIEELQMNVQKELNSGNRKLN
        LG TQ HHSLWFA P+KYSEGL+ED+KIRDCI+NYVQKN+RI SG+EGIARIEIQKRIDLIQ+II+MGFPKLLIE   R++EELQMNVQKELN  NRKLN
Subjt:  LGATQGHHSLWFAHPQKYSEGLQEDQKIRDCIRNYVQKNMRIFSGVEGIARIEIQKRIDLIQVIIFMGFPKLLIEGGSRKIEELQMNVQKELNSGNRKLN

Query:  IAITRIGNPYGHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQAGTKGIQIQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCCYPVRTIYGVLGIKI
        IAITRI NPYG PNILAEFIAGQLKNRVSFRKAMKKAIELTEQA TKGIQ+QIAGRIDGKEIARVEWIREGRVPLQTI AKIDYC Y VRTIYGVLGIKI
Subjt:  IAITRIGNPYGHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQAGTKGIQIQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCCYPVRTIYGVLGIKI

Query:  WIFVDEQ
        WIFVDE+
Subjt:  WIFVDEQ

ATCG00810.1 ribosomal protein L223.6e-5266.46Show/hide
Query:  KKNRYTREVYALGQHICMSPHKARRVIDQIRGRSYEETMMILELMPYRACYPILKLVYSAAANASHNMGFNERDLVISKAEVNQGTTVKKLKPRARGRSY
        KK  YT EVYALGQ+I MS HKARRVIDQIRGRSYEE +MILELMPYR CYPI KLVYSAAANASHN GF E +LVISKAEVNQG TVKKLKPRARGRSY
Subjt:  KKNRYTREVYALGQHICMSPHKARRVIDQIRGRSYEETMMILELMPYRACYPILKLVYSAAANASHNMGFNERDLVISKAEVNQGTTVKKLKPRARGRSY

Query:  PIKRPTCSITIVLKNTSLNEEEFKRYQYTILDLNKPGEWITKEKSTDMTCYDILGATQGHHSLW
        PIKR TC ITIVL++ S     +++Y+  ++ L KPG      ++ ++TCYD    T     LW
Subjt:  PIKRPTCSITIVLKNTSLNEEEFKRYQYTILDLNKPGEWITKEKSTDMTCYDILGATQGHHSLW

ATCG00820.1 ribosomal protein S191.7e-2276.67Show/hide
Query:  LTWSRASTIIPTMIGHTIAIHNGKDHLPIYITDRMVGHKLGEFAPTRNFRGHIKKNRYTR
        +TWSRASTIIPTMIGHTIAIHNG++HLP+YI D MVGHKLGEF+PT NFRGH K +  +R
Subjt:  LTWSRASTIIPTMIGHTIAIHNGKDHLPIYITDRMVGHKLGEFAPTRNFRGHIKKNRYTR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTCTAACTTGGTCCCGAGCATCTACCATTATACCCACAATGATTGGGCATACTATTGCTATTCATAATGGAAAGGACCATTTGCCTATTTATATAACGGATCGCAT
GGTAGGTCATAAATTGGGAGAATTTGCACCTACTCGAAATTTCCGGGGGCATATAAAAAAGAATCGATATACGAGGGAAGTATACGCTTTAGGTCAACATATATGTATGT
CCCCTCACAAAGCGCGAAGAGTAATTGATCAGATTCGTGGACGTTCCTACGAAGAAACAATGATGATACTCGAACTCATGCCTTATCGAGCATGTTATCCAATTTTAAAA
TTGGTTTATTCGGCAGCAGCAAATGCTAGTCACAATATGGGTTTCAACGAAAGAGATTTAGTCATTAGTAAAGCAGAAGTCAATCAAGGTACTACTGTGAAAAAATTAAA
ACCTCGAGCTCGAGGGCGAAGTTATCCCATAAAACGACCCACTTGTTCTATAACTATTGTATTGAAAAATACATCTTTGAATGAAGAAGAGTTTAAAAGATACCAATACA
CCATATTAGACTTAAACAAACCTGGTGAATGGATAACTAAAGAAAAGTCCACAGATATGACGTGTTATGACATACTTGGTGCAACCCAAGGGCATCATTCTCTTTGGTTT
GCACACCCCCAAAAATATTCCGAAGGTTTACAAGAAGATCAAAAAATACGAGATTGTATCCGGAATTATGTACAAAAAAACATGAGAATATTTTCTGGTGTTGAGGGAAT
TGCACGTATCGAGATTCAAAAAAGAATTGATCTTATTCAAGTGATAATCTTTATGGGATTCCCAAAGTTATTAATAGAAGGTGGGTCTCGAAAAATCGAAGAATTACAGA
TGAATGTACAAAAAGAATTAAATTCTGGGAACCGAAAACTCAACATTGCTATTACAAGAATAGGAAACCCTTATGGACACCCTAATATTCTCGCCGAATTTATAGCCGGA
CAATTAAAGAATAGAGTTTCATTTCGCAAAGCAATGAAAAAAGCTATTGAATTAACTGAACAGGCGGGTACAAAGGGAATTCAAATACAAATTGCCGGACGTATAGACGG
AAAAGAAATTGCACGTGTCGAATGGATCAGAGAAGGAAGGGTTCCTCTACAAACCATTCGAGCTAAAATTGATTATTGTTGCTATCCAGTTCGAACTATCTATGGGGTAT
TAGGTATAAAAATTTGGATATTTGTAGACGAACAATAA
mRNA sequenceShow/hide mRNA sequence
ATGTCTCTAACTTGGTCCCGAGCATCTACCATTATACCCACAATGATTGGGCATACTATTGCTATTCATAATGGAAAGGACCATTTGCCTATTTATATAACGGATCGCAT
GGTAGGTCATAAATTGGGAGAATTTGCACCTACTCGAAATTTCCGGGGGCATATAAAAAAGAATCGATATACGAGGGAAGTATACGCTTTAGGTCAACATATATGTATGT
CCCCTCACAAAGCGCGAAGAGTAATTGATCAGATTCGTGGACGTTCCTACGAAGAAACAATGATGATACTCGAACTCATGCCTTATCGAGCATGTTATCCAATTTTAAAA
TTGGTTTATTCGGCAGCAGCAAATGCTAGTCACAATATGGGTTTCAACGAAAGAGATTTAGTCATTAGTAAAGCAGAAGTCAATCAAGGTACTACTGTGAAAAAATTAAA
ACCTCGAGCTCGAGGGCGAAGTTATCCCATAAAACGACCCACTTGTTCTATAACTATTGTATTGAAAAATACATCTTTGAATGAAGAAGAGTTTAAAAGATACCAATACA
CCATATTAGACTTAAACAAACCTGGTGAATGGATAACTAAAGAAAAGTCCACAGATATGACGTGTTATGACATACTTGGTGCAACCCAAGGGCATCATTCTCTTTGGTTT
GCACACCCCCAAAAATATTCCGAAGGTTTACAAGAAGATCAAAAAATACGAGATTGTATCCGGAATTATGTACAAAAAAACATGAGAATATTTTCTGGTGTTGAGGGAAT
TGCACGTATCGAGATTCAAAAAAGAATTGATCTTATTCAAGTGATAATCTTTATGGGATTCCCAAAGTTATTAATAGAAGGTGGGTCTCGAAAAATCGAAGAATTACAGA
TGAATGTACAAAAAGAATTAAATTCTGGGAACCGAAAACTCAACATTGCTATTACAAGAATAGGAAACCCTTATGGACACCCTAATATTCTCGCCGAATTTATAGCCGGA
CAATTAAAGAATAGAGTTTCATTTCGCAAAGCAATGAAAAAAGCTATTGAATTAACTGAACAGGCGGGTACAAAGGGAATTCAAATACAAATTGCCGGACGTATAGACGG
AAAAGAAATTGCACGTGTCGAATGGATCAGAGAAGGAAGGGTTCCTCTACAAACCATTCGAGCTAAAATTGATTATTGTTGCTATCCAGTTCGAACTATCTATGGGGTAT
TAGGTATAAAAATTTGGATATTTGTAGACGAACAATAA
Protein sequenceShow/hide protein sequence
MSLTWSRASTIIPTMIGHTIAIHNGKDHLPIYITDRMVGHKLGEFAPTRNFRGHIKKNRYTREVYALGQHICMSPHKARRVIDQIRGRSYEETMMILELMPYRACYPILK
LVYSAAANASHNMGFNERDLVISKAEVNQGTTVKKLKPRARGRSYPIKRPTCSITIVLKNTSLNEEEFKRYQYTILDLNKPGEWITKEKSTDMTCYDILGATQGHHSLWF
AHPQKYSEGLQEDQKIRDCIRNYVQKNMRIFSGVEGIARIEIQKRIDLIQVIIFMGFPKLLIEGGSRKIEELQMNVQKELNSGNRKLNIAITRIGNPYGHPNILAEFIAG
QLKNRVSFRKAMKKAIELTEQAGTKGIQIQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCCYPVRTIYGVLGIKIWIFVDEQ