| GenBank top hits | e value | %identity | Alignment |
|---|
| TYJ99083.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] | 1.6e-42 | 68.24 | Show/hide |
Query: SRQLFDEMSTRSVVISWNSMIAAYSRGF------GLFKEMLGVRFEPSSSTFVSLLS-----------------GCITKFQLHDDTPVANSLMQMYVNFR
SRQ+FDE STRSV+ WNSMIAAYSRGF LF+EMLG FEP+SSTFVSLLS G +TKFQ HDDTPV NSL+QMYVNF
Subjt: SRQLFDEMSTRSVVISWNSMIAAYSRGF------GLFKEMLGVRFEPSSSTFVSLLS-----------------GCITKFQLHDDTPVANSLMQMYVNFR
Query: QIDSACSIFYATSDKTVISWTIMLGGYLKVEAIAKVFDIFSQMRQNNV
QIDSACS+FYA S+KTVISWTIMLGGYLK A+AKVF+ FSQMRQNNV
Subjt: QIDSACSIFYATSDKTVISWTIMLGGYLKVEAIAKVFDIFSQMRQNNV
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| XP_004137641.1 pentatricopeptide repeat-containing protein At3g12770 [Cucumis sativus] | 3.0e-44 | 70.27 | Show/hide |
Query: SRQLFDEMSTRSVVISWNSMIAAYSRGF------GLFKEMLGVRFEPSSSTFVSLLS-----------------GCITKFQLHDDTPVANSLMQMYVNFR
SRQ+FDE STRS VISWNSMIAAYSR F LF+EMLG FEP+SSTFVSLLS GC+TKFQLHDDTPV NSL+QMYVNF
Subjt: SRQLFDEMSTRSVVISWNSMIAAYSRGF------GLFKEMLGVRFEPSSSTFVSLLS-----------------GCITKFQLHDDTPVANSLMQMYVNFR
Query: QIDSACSIFYATSDKTVISWTIMLGGYLKVEAIAKVFDIFSQMRQNNV
QIDSACS+FYA S+KTVISWTIMLGGYLK A+AKVF+ FSQMRQNNV
Subjt: QIDSACSIFYATSDKTVISWTIMLGGYLKVEAIAKVFDIFSQMRQNNV
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| XP_008446053.1 PREDICTED: pentatricopeptide repeat-containing protein At2g29760, chloroplastic-like [Cucumis melo] | 1.6e-42 | 68.24 | Show/hide |
Query: SRQLFDEMSTRSVVISWNSMIAAYSRGF------GLFKEMLGVRFEPSSSTFVSLLS-----------------GCITKFQLHDDTPVANSLMQMYVNFR
SRQ+FDE STRSV+ WNSMIAAYSRGF LF+EMLG FEP+SSTFVSLLS G +TKFQ HDDTPV NSL+QMYVNF
Subjt: SRQLFDEMSTRSVVISWNSMIAAYSRGF------GLFKEMLGVRFEPSSSTFVSLLS-----------------GCITKFQLHDDTPVANSLMQMYVNFR
Query: QIDSACSIFYATSDKTVISWTIMLGGYLKVEAIAKVFDIFSQMRQNNV
QIDSACS+FYA S+KTVISWTIMLGGYLK A+AKVF+ FSQMRQNNV
Subjt: QIDSACSIFYATSDKTVISWTIMLGGYLKVEAIAKVFDIFSQMRQNNV
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| XP_022137264.1 pentatricopeptide repeat-containing protein At2g13600-like [Momordica charantia] | 2.9e-39 | 65.77 | Show/hide |
Query: TSRQLFDEMSTRSVVISWNSMIAAYSR------GFGLFKEMLGVRFEPSSSTFVSLLS-----------------GCITKFQLHDDTPVANSLMQMYVNF
+SRQ+FDEMS RS VISWNSMIAAYSR GF LF+EM G FEP+SSTFVSLLS GC+TKF+L +DTPVANSLM+MYVNF
Subjt: TSRQLFDEMSTRSVVISWNSMIAAYSR------GFGLFKEMLGVRFEPSSSTFVSLLS-----------------GCITKFQLHDDTPVANSLMQMYVNF
Query: RQIDSACSIFYATSDKTVISWTIMLGGYLKVEAIAKVFDIFSQMRQNNV
QID+A S+FYA KTVISWTIMLGGYLK A+A+VF IFSQMR NNV
Subjt: RQIDSACSIFYATSDKTVISWTIMLGGYLKVEAIAKVFDIFSQMRQNNV
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| XP_038893873.1 LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein DOT4, chloroplastic-like [Benincasa hispida] | 5.5e-46 | 68.15 | Show/hide |
Query: CTPSAHFPTSRQLFDEMSTRSVVISWNSMIAAYSRGFG------LFKEMLGVRFEPSSSTFVSLLS-----------------GCITKFQLHDDTPVANS
C+ + +SRQ+FDEMSTRS VISWNSMIAAYSR FG LF+EMLGV FE +SSTFVSLLS GCITKFQL DDTPVANS
Subjt: CTPSAHFPTSRQLFDEMSTRSVVISWNSMIAAYSRGFG------LFKEMLGVRFEPSSSTFVSLLS-----------------GCITKFQLHDDTPVANS
Query: LMQMYVNFRQIDSACSIFYATSDKTVISWTIMLGGYLKVEAIAKVFDIFSQMRQNNV
LMQMYVNF QIDSACS+FY SDKTVISWTIMLGGYL+ A+AKVF+IF+QMR+NNV
Subjt: LMQMYVNFRQIDSACSIFYATSDKTVISWTIMLGGYLKVEAIAKVFDIFSQMRQNNV
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A0A0LT91 Uncharacterized protein | 1.5e-44 | 70.27 | Show/hide |
Query: SRQLFDEMSTRSVVISWNSMIAAYSRGF------GLFKEMLGVRFEPSSSTFVSLLS-----------------GCITKFQLHDDTPVANSLMQMYVNFR
SRQ+FDE STRS VISWNSMIAAYSR F LF+EMLG FEP+SSTFVSLLS GC+TKFQLHDDTPV NSL+QMYVNF
Subjt: SRQLFDEMSTRSVVISWNSMIAAYSRGF------GLFKEMLGVRFEPSSSTFVSLLS-----------------GCITKFQLHDDTPVANSLMQMYVNFR
Query: QIDSACSIFYATSDKTVISWTIMLGGYLKVEAIAKVFDIFSQMRQNNV
QIDSACS+FYA S+KTVISWTIMLGGYLK A+AKVF+ FSQMRQNNV
Subjt: QIDSACSIFYATSDKTVISWTIMLGGYLKVEAIAKVFDIFSQMRQNNV
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| A0A1S3BDP0 pentatricopeptide repeat-containing protein At2g29760, chloroplastic-like | 8.0e-43 | 68.24 | Show/hide |
Query: SRQLFDEMSTRSVVISWNSMIAAYSRGF------GLFKEMLGVRFEPSSSTFVSLLS-----------------GCITKFQLHDDTPVANSLMQMYVNFR
SRQ+FDE STRSV+ WNSMIAAYSRGF LF+EMLG FEP+SSTFVSLLS G +TKFQ HDDTPV NSL+QMYVNF
Subjt: SRQLFDEMSTRSVVISWNSMIAAYSRGF------GLFKEMLGVRFEPSSSTFVSLLS-----------------GCITKFQLHDDTPVANSLMQMYVNFR
Query: QIDSACSIFYATSDKTVISWTIMLGGYLKVEAIAKVFDIFSQMRQNNV
QIDSACS+FYA S+KTVISWTIMLGGYLK A+AKVF+ FSQMRQNNV
Subjt: QIDSACSIFYATSDKTVISWTIMLGGYLKVEAIAKVFDIFSQMRQNNV
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| A0A200QK45 Pentatricopeptide repeat | 4.9e-24 | 41.4 | Show/hide |
Query: AHFPTSRQLFDEMSTRSVVISWNSMIAAYSR------GFGLFKEMLGVRFEPSSSTFVSLLSGCI-----------------TKFQLHDDTPVANSLMQM
++ +SR LFDEM RSVV SWNSMI+AY + FGL K+M + EPSSST VS++SGC K L D ++NS+M M
Subjt: AHFPTSRQLFDEMSTRSVVISWNSMIAAYSR------GFGLFKEMLGVRFEPSSSTFVSLLSGCI-----------------TKFQLHDDTPVANSLMQM
Query: YVNFRQIDSACSIFYATSDKTVISWTIMLGGYLKVEAIAKVFDIFSQMRQNNVGVES
Y+ F QID+A ++FY+ ++K+ ISWT ++GG++K+ + + F++F+QMRQ + ++S
Subjt: YVNFRQIDSACSIFYATSDKTVISWTIMLGGYLKVEAIAKVFDIFSQMRQNNVGVES
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| A0A5D3BIG9 Pentatricopeptide repeat-containing protein | 8.0e-43 | 68.24 | Show/hide |
Query: SRQLFDEMSTRSVVISWNSMIAAYSRGF------GLFKEMLGVRFEPSSSTFVSLLS-----------------GCITKFQLHDDTPVANSLMQMYVNFR
SRQ+FDE STRSV+ WNSMIAAYSRGF LF+EMLG FEP+SSTFVSLLS G +TKFQ HDDTPV NSL+QMYVNF
Subjt: SRQLFDEMSTRSVVISWNSMIAAYSRGF------GLFKEMLGVRFEPSSSTFVSLLS-----------------GCITKFQLHDDTPVANSLMQMYVNFR
Query: QIDSACSIFYATSDKTVISWTIMLGGYLKVEAIAKVFDIFSQMRQNNV
QIDSACS+FYA S+KTVISWTIMLGGYLK A+AKVF+ FSQMRQNNV
Subjt: QIDSACSIFYATSDKTVISWTIMLGGYLKVEAIAKVFDIFSQMRQNNV
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| A0A6J1C6R4 pentatricopeptide repeat-containing protein At2g13600-like | 1.4e-39 | 65.77 | Show/hide |
Query: TSRQLFDEMSTRSVVISWNSMIAAYSR------GFGLFKEMLGVRFEPSSSTFVSLLS-----------------GCITKFQLHDDTPVANSLMQMYVNF
+SRQ+FDEMS RS VISWNSMIAAYSR GF LF+EM G FEP+SSTFVSLLS GC+TKF+L +DTPVANSLM+MYVNF
Subjt: TSRQLFDEMSTRSVVISWNSMIAAYSR------GFGLFKEMLGVRFEPSSSTFVSLLS-----------------GCITKFQLHDDTPVANSLMQMYVNF
Query: RQIDSACSIFYATSDKTVISWTIMLGGYLKVEAIAKVFDIFSQMRQNNV
QID+A S+FYA KTVISWTIMLGGYLK A+A+VF IFSQMR NNV
Subjt: RQIDSACSIFYATSDKTVISWTIMLGGYLKVEAIAKVFDIFSQMRQNNV
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| Q3E6Q1 Pentatricopeptide repeat-containing protein At1g11290, chloroplastic | 7.8e-11 | 31.29 | Show/hide |
Query: TSRQLFDEMSTRSVVISWNSMIAAY------SRGFGLFKEMLGVRFEPSSSTFVSLLSGCI---------------TKFQLHDDTPVANSLMQMYVNFRQ
T+RQLFD M R+VV SWNSMI AY +F++ML +P+ + + L C + L + V NSL+ MY ++
Subjt: TSRQLFDEMSTRSVVISWNSMIAAY------SRGFGLFKEMLGVRFEPSSSTFVSLLSGCI---------------TKFQLHDDTPVANSLMQMYVNFRQ
Query: IDSACSIFYATSDKTVISWTIMLGGYLKVEAIAKVFDIFSQMRQNNV
+D+A S+F +T++SW M+ G+ + + FSQMR V
Subjt: IDSACSIFYATSDKTVISWTIMLGGYLKVEAIAKVFDIFSQMRQNNV
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| Q9LN01 Pentatricopeptide repeat-containing protein At1g08070, chloroplastic | 1.7e-10 | 27.5 | Show/hide |
Query: TYLFKPHSSTCTPSAHFPTSRQLFDEMSTRSVVISWNSMIAAYS------RGFGLFKEMLGVRFEPSSSTFVSLLSGCITK------FQLH---------
T L K ++S + +++LFDE+ + VV SWN+MI+ Y+ LFK+M+ P ST V+++S C Q+H
Subjt: TYLFKPHSSTCTPSAHFPTSRQLFDEMSTRSVVISWNSMIAAYS------RGFGLFKEMLGVRFEPSSSTFVSLLSGCITK------FQLH---------
Query: DDTPVANSLMQMYVNFRQIDSACSIFYATSDKTVISWTIMLGGYLKVEAIAKVFDIFSQM
+ + N+L+ +Y ++++AC +F K VISW ++GGY + + +F +M
Subjt: DDTPVANSLMQMYVNFRQIDSACSIFYATSDKTVISWTIMLGGYLKVEAIAKVFDIFSQM
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| Q9SII7 Pentatricopeptide repeat-containing protein At2g17210 | 1.5e-09 | 31.58 | Show/hide |
Query: TSRQLFDEMSTRSVVISWNSMIAAYSR------GFGLFKEML-GVRFEPSSSTFVSLLSGC-----------ITKFQLH-----DDTPVANSLMQMYVNF
++R+LFDEMS R VISW+ +I +Y + G LFKEM+ + EP T S+L C + F + D V NSL+ MY
Subjt: TSRQLFDEMSTRSVVISWNSMIAAYSR------GFGLFKEML-GVRFEPSSSTFVSLLSGC-----------ITKFQLH-----DDTPVANSLMQMYVNF
Query: RQIDSACSIFYATSDKTVISWTIMLGGYLKVEAIAKVFDIFSQMRQNNVGVE
+DSA +F T+ + ++SW +L G++ + + ++F M Q V V+
Subjt: RQIDSACSIFYATSDKTVISWTIMLGGYLKVEAIAKVFDIFSQMRQNNVGVE
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| Q9STS9 Putative pentatricopeptide repeat-containing protein At3g47840 | 3.0e-10 | 31.91 | Show/hide |
Query: LFDEMSTRSVVISWNSMIAAYSR------GFGLFKEMLGVRFEPSSSTFVSLLSGC---------------ITKFQLHDDTPVANSLMQMYVNFRQIDSA
LF+ MS R VV SW S+I AY R F +M + P+ TF S+ S C + L+D V+NS+M+MY + SA
Subjt: LFDEMSTRSVVISWNSMIAAYSR------GFGLFKEMLGVRFEPSSSTFVSLLSGC---------------ITKFQLHDDTPVANSLMQMYVNFRQIDSA
Query: CSIFYATSDKTVISWTIMLGGYLKVEAIAKVFDIFSQMRQN
+F + +ISW+ ++GGY + + F FS MRQ+
Subjt: CSIFYATSDKTVISWTIMLGGYLKVEAIAKVFDIFSQMRQN
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| Q9SY02 Pentatricopeptide repeat-containing protein At4g02750 | 3.3e-09 | 29.17 | Show/hide |
Query: SAHFPTSRQLFDEMSTRSVVISWNSMIAAY--SRGFGLFKEMLGVRFEPSSSTFVSLLS-----GCITKFQ-LHDDTPVA-----NSLMQMYVNFRQIDS
+ F +R+LFDEM R +V SWN MI Y +R G +E+ + E ++ ++LS GC+ + + D P N+L+ YV +++
Subjt: SAHFPTSRQLFDEMSTRSVVISWNSMIAAY--SRGFGLFKEMLGVRFEPSSSTFVSLLS-----GCITKFQ-LHDDTPVA-----NSLMQMYVNFRQIDS
Query: ACSIFYATSDKTVISWTIMLGGYLKVEAIAKVFDIFSQMRQNNV
AC +F + + ++SW +LGG++K + I + F M +V
Subjt: ACSIFYATSDKTVISWTIMLGGYLKVEAIAKVFDIFSQMRQNNV
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| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT1G08070.1 Tetratricopeptide repeat (TPR)-like superfamily protein | 1.2e-11 | 27.5 | Show/hide |
Query: TYLFKPHSSTCTPSAHFPTSRQLFDEMSTRSVVISWNSMIAAYS------RGFGLFKEMLGVRFEPSSSTFVSLLSGCITK------FQLH---------
T L K ++S + +++LFDE+ + VV SWN+MI+ Y+ LFK+M+ P ST V+++S C Q+H
Subjt: TYLFKPHSSTCTPSAHFPTSRQLFDEMSTRSVVISWNSMIAAYS------RGFGLFKEMLGVRFEPSSSTFVSLLSGCITK------FQLH---------
Query: DDTPVANSLMQMYVNFRQIDSACSIFYATSDKTVISWTIMLGGYLKVEAIAKVFDIFSQM
+ + N+L+ +Y ++++AC +F K VISW ++GGY + + +F +M
Subjt: DDTPVANSLMQMYVNFRQIDSACSIFYATSDKTVISWTIMLGGYLKVEAIAKVFDIFSQM
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| AT1G11290.1 Pentatricopeptide repeat (PPR) superfamily protein | 5.5e-12 | 31.29 | Show/hide |
Query: TSRQLFDEMSTRSVVISWNSMIAAY------SRGFGLFKEMLGVRFEPSSSTFVSLLSGCI---------------TKFQLHDDTPVANSLMQMYVNFRQ
T+RQLFD M R+VV SWNSMI AY +F++ML +P+ + + L C + L + V NSL+ MY ++
Subjt: TSRQLFDEMSTRSVVISWNSMIAAY------SRGFGLFKEMLGVRFEPSSSTFVSLLSGCI---------------TKFQLHDDTPVANSLMQMYVNFRQ
Query: IDSACSIFYATSDKTVISWTIMLGGYLKVEAIAKVFDIFSQMRQNNV
+D+A S+F +T++SW M+ G+ + + FSQMR V
Subjt: IDSACSIFYATSDKTVISWTIMLGGYLKVEAIAKVFDIFSQMRQNNV
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| AT2G17210.1 Tetratricopeptide repeat (TPR)-like superfamily protein | 1.0e-10 | 31.58 | Show/hide |
Query: TSRQLFDEMSTRSVVISWNSMIAAYSR------GFGLFKEML-GVRFEPSSSTFVSLLSGC-----------ITKFQLH-----DDTPVANSLMQMYVNF
++R+LFDEMS R VISW+ +I +Y + G LFKEM+ + EP T S+L C + F + D V NSL+ MY
Subjt: TSRQLFDEMSTRSVVISWNSMIAAYSR------GFGLFKEML-GVRFEPSSSTFVSLLSGC-----------ITKFQLH-----DDTPVANSLMQMYVNF
Query: RQIDSACSIFYATSDKTVISWTIMLGGYLKVEAIAKVFDIFSQMRQNNVGVE
+DSA +F T+ + ++SW +L G++ + + ++F M Q V V+
Subjt: RQIDSACSIFYATSDKTVISWTIMLGGYLKVEAIAKVFDIFSQMRQNNVGVE
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| AT3G47840.1 Tetratricopeptide repeat (TPR)-like superfamily protein | 2.1e-11 | 31.91 | Show/hide |
Query: LFDEMSTRSVVISWNSMIAAYSR------GFGLFKEMLGVRFEPSSSTFVSLLSGC---------------ITKFQLHDDTPVANSLMQMYVNFRQIDSA
LF+ MS R VV SW S+I AY R F +M + P+ TF S+ S C + L+D V+NS+M+MY + SA
Subjt: LFDEMSTRSVVISWNSMIAAYSR------GFGLFKEMLGVRFEPSSSTFVSLLSGC---------------ITKFQLHDDTPVANSLMQMYVNFRQIDSA
Query: CSIFYATSDKTVISWTIMLGGYLKVEAIAKVFDIFSQMRQN
+F + +ISW+ ++GGY + + F FS MRQ+
Subjt: CSIFYATSDKTVISWTIMLGGYLKVEAIAKVFDIFSQMRQN
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| AT4G02750.1 Tetratricopeptide repeat (TPR)-like superfamily protein | 2.3e-10 | 29.17 | Show/hide |
Query: SAHFPTSRQLFDEMSTRSVVISWNSMIAAY--SRGFGLFKEMLGVRFEPSSSTFVSLLS-----GCITKFQ-LHDDTPVA-----NSLMQMYVNFRQIDS
+ F +R+LFDEM R +V SWN MI Y +R G +E+ + E ++ ++LS GC+ + + D P N+L+ YV +++
Subjt: SAHFPTSRQLFDEMSTRSVVISWNSMIAAY--SRGFGLFKEMLGVRFEPSSSTFVSLLS-----GCITKFQ-LHDDTPVA-----NSLMQMYVNFRQIDS
Query: ACSIFYATSDKTVISWTIMLGGYLKVEAIAKVFDIFSQMRQNNV
AC +F + + ++SW +LGG++K + I + F M +V
Subjt: ACSIFYATSDKTVISWTIMLGGYLKVEAIAKVFDIFSQMRQNNV
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