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CaUC04G069260 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC04G069260
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
Description1,4-alpha-glucan branching enzyme
Genome locationCiama_Chr04:10924051..10926699
RNA-Seq ExpressionCaUC04G069260
SyntenyCaUC04G069260
Gene Ontology termsGO:0005978 - glycogen biosynthetic process (biological process)
GO:0005983 - starch catabolic process (biological process)
GO:0019252 - starch biosynthetic process (biological process)
GO:0009501 - amyloplast (cellular component)
GO:0003844 - 1,4-alpha-glucan branching enzyme activity (molecular function)
GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds (molecular function)
GO:0043169 - cation binding (molecular function)
GO:0102752 - 1,4-alpha-glucan branching enzyme activity (using a glucosylated glycogenin as primer for glycogen synthesis) (molecular function)
InterPro domainsIPR037439 - 1,4-alpha-glucan-branching enzyme


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ACE88265.1 rice starch branching enzyme [Oryza sativa Japonica Group]1.9e-0872.09Show/hide
Query:  HHLIRLITMGLGREGYLNFMGIEFGHPEWIGFPRAINIFLVGQ
        H +IRLITMGLG EGYLNFMG EFGHPEWI FPRA  +   G+
Subjt:  HHLIRLITMGLGREGYLNFMGIEFGHPEWIGFPRAINIFLVGQ
ACY56134.1 starch branching enzyme 3 [Oryza sativa Indica Group]1.9e-0872.09Show/hide
Query:  HHLIRLITMGLGREGYLNFMGIEFGHPEWIGFPRAINIFLVGQ
        H +IRLITMGLG EGYLNFMG EFGHPEWI FPRA  +   G+
Subjt:  HHLIRLITMGLGREGYLNFMGIEFGHPEWIGFPRAINIFLVGQ
AFN27052.1 starch branching enzyme 3 [Oryza sativa Japonica Group]1.9e-0872.09Show/hide
Query:  HHLIRLITMGLGREGYLNFMGIEFGHPEWIGFPRAINIFLVGQ
        H +IRLITMGLG EGYLNFMG EFGHPEWI FPRA  +   G+
Subjt:  HHLIRLITMGLGREGYLNFMGIEFGHPEWIGFPRAINIFLVGQ
XP_015627503.1 1,4-alpha-glucan-branching enzyme 2, chloroplastic/amyloplastic [Oryza sativa Japonica Group]1.9e-0872.09Show/hide
Query:  HHLIRLITMGLGREGYLNFMGIEFGHPEWIGFPRAINIFLVGQ
        H +IRLITMGLG EGYLNFMG EFGHPEWI FPRA  +   G+
Subjt:  HHLIRLITMGLGREGYLNFMGIEFGHPEWIGFPRAINIFLVGQ
XP_042049313.1 1,4-alpha-glucan-branching enzyme 2, chloroplastic/amyloplastic-like [Salvia splendens]1.9e-0874.42Show/hide
Query:  HHLIRLITMGLGREGYLNFMGIEFGHPEWIGFPRAINIFLVGQ
        H +IRLITMGLG EGYLNFMG EFGHPEWI FPRA      GQ
Subjt:  HHLIRLITMGLGREGYLNFMGIEFGHPEWIGFPRAINIFLVGQ
TrEMBL top hitse value%identityAlignment
A2X5K0 1,4-alpha-glucan branching enzyme9.4e-0972.09Show/hide
Query:  HHLIRLITMGLGREGYLNFMGIEFGHPEWIGFPRAINIFLVGQ
        H +IRLITMGLG EGYLNFMG EFGHPEWI FPRA  +   G+
Subjt:  HHLIRLITMGLGREGYLNFMGIEFGHPEWIGFPRAINIFLVGQ
D0TZK1 1,4-alpha-glucan branching enzyme9.4e-0972.09Show/hide
Query:  HHLIRLITMGLGREGYLNFMGIEFGHPEWIGFPRAINIFLVGQ
        H +IRLITMGLG EGYLNFMG EFGHPEWI FPRA  +   G+
Subjt:  HHLIRLITMGLGREGYLNFMGIEFGHPEWIGFPRAINIFLVGQ
I6VRB8 1,4-alpha-glucan branching enzyme9.4e-0972.09Show/hide
Query:  HHLIRLITMGLGREGYLNFMGIEFGHPEWIGFPRAINIFLVGQ
        H +IRLITMGLG EGYLNFMG EFGHPEWI FPRA  +   G+
Subjt:  HHLIRLITMGLGREGYLNFMGIEFGHPEWIGFPRAINIFLVGQ
Q0E0R5 1,4-alpha-glucan branching enzyme9.4e-0972.09Show/hide
Query:  HHLIRLITMGLGREGYLNFMGIEFGHPEWIGFPRAINIFLVGQ
        H +IRLITMGLG EGYLNFMG EFGHPEWI FPRA  +   G+
Subjt:  HHLIRLITMGLGREGYLNFMGIEFGHPEWIGFPRAINIFLVGQ
Q6H6P8 1,4-alpha-glucan branching enzyme9.4e-0972.09Show/hide
Query:  HHLIRLITMGLGREGYLNFMGIEFGHPEWIGFPRAINIFLVGQ
        H +IRLITMGLG EGYLNFMG EFGHPEWI FPRA  +   G+
Subjt:  HHLIRLITMGLGREGYLNFMGIEFGHPEWIGFPRAINIFLVGQ
SwissProt top hitse value%identityAlignment
O23647 1,4-alpha-glucan-branching enzyme 2-1, chloroplastic/amyloplastic1.7e-1085.29Show/hide
Query:  HHLIRLITMGLGREGYLNFMGIEFGHPEWIGFPR
        H +IRLITMGLG EGYLNFMG EFGHPEWI FPR
Subjt:  HHLIRLITMGLGREGYLNFMGIEFGHPEWIGFPR
Q04446 1,4-alpha-glucan-branching enzyme1.1e-0975.68Show/hide
Query:  HHLIRLITMGLGREGYLNFMGIEFGHPEWIGFPRAIN
        H +IRLIT GLG EGYLNFMG EFGHPEW+ FPR  N
Subjt:  HHLIRLITMGLGREGYLNFMGIEFGHPEWIGFPRAIN
Q08047 1,4-alpha-glucan-branching enzyme 2, chloroplastic/amyloplastic1.7e-1085.29Show/hide
Query:  HHLIRLITMGLGREGYLNFMGIEFGHPEWIGFPR
        H +IRLITMGLG EGYLNFMG EFGHPEWI FPR
Subjt:  HHLIRLITMGLGREGYLNFMGIEFGHPEWIGFPR
Q41058 1,4-alpha-glucan-branching enzyme 1, chloroplastic/amyloplastic1.7e-1085.29Show/hide
Query:  HHLIRLITMGLGREGYLNFMGIEFGHPEWIGFPR
        H +IRLITMGLG EGYLNFMG EFGHPEWI FPR
Subjt:  HHLIRLITMGLGREGYLNFMGIEFGHPEWIGFPR
Q9LZS3 1,4-alpha-glucan-branching enzyme 2-2, chloroplastic/amyloplastic1.7e-1085.29Show/hide
Query:  HHLIRLITMGLGREGYLNFMGIEFGHPEWIGFPR
        H +IRLITMGLG EGYLNFMG EFGHPEWI FPR
Subjt:  HHLIRLITMGLGREGYLNFMGIEFGHPEWIGFPR
Arabidopsis top hitse value%identityAlignment
AT2G36390.1 starch branching enzyme 2.11.2e-1185.29Show/hide
Query:  HHLIRLITMGLGREGYLNFMGIEFGHPEWIGFPR
        H +IRLITMGLG EGYLNFMG EFGHPEWI FPR
Subjt:  HHLIRLITMGLGREGYLNFMGIEFGHPEWIGFPR
AT3G20440.1 Alpha amylase family protein5.1e-0734Show/hide
Query:  KGVIDVLKSFKKIHRTIYKGFKNDQEV------HQDPSFKEINGLGLPLPFWRNSVFETIGHHLIRLITMGLGREGYLNFMGIEFGHPEWIGFPRAINIF
        K   D + S+ + H     G ++  E+      +  P  KE+   G+ L            H +IRLIT   G   YLNFMG EFGHPE + FP   N F
Subjt:  KGVIDVLKSFKKIHRTIYKGFKNDQEV------HQDPSFKEINGLGLPLPFWRNSVFETIGHHLIRLITMGLGREGYLNFMGIEFGHPEWIGFPRAINIF
AT3G20440.2 Alpha amylase family protein5.1e-0734Show/hide
Query:  KGVIDVLKSFKKIHRTIYKGFKNDQEV------HQDPSFKEINGLGLPLPFWRNSVFETIGHHLIRLITMGLGREGYLNFMGIEFGHPEWIGFPRAINIF
        K   D + S+ + H     G ++  E+      +  P  KE+   G+ L            H +IRLIT   G   YLNFMG EFGHPE + FP   N F
Subjt:  KGVIDVLKSFKKIHRTIYKGFKNDQEV------HQDPSFKEINGLGLPLPFWRNSVFETIGHHLIRLITMGLGREGYLNFMGIEFGHPEWIGFPRAINIF
AT3G20440.3 Alpha amylase family protein5.1e-0734Show/hide
Query:  KGVIDVLKSFKKIHRTIYKGFKNDQEV------HQDPSFKEINGLGLPLPFWRNSVFETIGHHLIRLITMGLGREGYLNFMGIEFGHPEWIGFPRAINIF
        K   D + S+ + H     G ++  E+      +  P  KE+   G+ L            H +IRLIT   G   YLNFMG EFGHPE + FP   N F
Subjt:  KGVIDVLKSFKKIHRTIYKGFKNDQEV------HQDPSFKEINGLGLPLPFWRNSVFETIGHHLIRLITMGLGREGYLNFMGIEFGHPEWIGFPRAINIF
AT5G03650.1 starch branching enzyme 2.21.2e-1185.29Show/hide
Query:  HHLIRLITMGLGREGYLNFMGIEFGHPEWIGFPR
        H +IRLITMGLG EGYLNFMG EFGHPEWI FPR
Subjt:  HHLIRLITMGLGREGYLNFMGIEFGHPEWIGFPR

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGACCAAGAACACCTCCAAGAATCCTGACCCTCCTTCCTTAGATGCTTCATCCTCTTCTCATCGATCCCTCAACCAACGCTTGACTCATGTGGAAGCTTCTATTGG
AGAGCTTAACACAAGGCTTCTAGATGTGAAGTCCAACATGGTTGGCCATACGGCTACAATGAACAACACCATAACCGTCTATCCAATCAAGAACAATTCGACAATGCAAT
TCGCGGCCAAGAATGTGGGAATTATCATCAAGATTTTCACGGGCGTGATCAACAAAATCGCCAAGAATATCAAAGACGTGACCAACGAAATTGCCAAGAATATCAAAGGC
GTGATCGATGTGCTCAAGAGCTTCAAGAAGATCCACCGCACCATTTACAAGGGCTTCAAGAATGACCAAGAAGTTCATCAAGACCCTTCATTCAAAGAAATCAACGGCTT
AGGCCTGCCCTTGCCCTTTTGGAGGAATTCAGTTTTTGAAACCATTGGCCACCATTTGATAAGGCTTATTACTATGGGTTTGGGCAGAGAAGGATATCTGAATTTCATGG
GAATTGAATTTGGACATCCTGAGTGGATCGGTTTTCCAAGGGCGATCAACATTTTCCTGGTGGGGCAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGTGACCAAGAACACCTCCAAGAATCCTGACCCTCCTTCCTTAGATGCTTCATCCTCTTCTCATCGATCCCTCAACCAACGCTTGACTCATGTGGAAGCTTCTATTGG
AGAGCTTAACACAAGGCTTCTAGATGTGAAGTCCAACATGGTTGGCCATACGGCTACAATGAACAACACCATAACCGTCTATCCAATCAAGAACAATTCGACAATGCAAT
TCGCGGCCAAGAATGTGGGAATTATCATCAAGATTTTCACGGGCGTGATCAACAAAATCGCCAAGAATATCAAAGACGTGACCAACGAAATTGCCAAGAATATCAAAGGC
GTGATCGATGTGCTCAAGAGCTTCAAGAAGATCCACCGCACCATTTACAAGGGCTTCAAGAATGACCAAGAAGTTCATCAAGACCCTTCATTCAAAGAAATCAACGGCTT
AGGCCTGCCCTTGCCCTTTTGGAGGAATTCAGTTTTTGAAACCATTGGCCACCATTTGATAAGGCTTATTACTATGGGTTTGGGCAGAGAAGGATATCTGAATTTCATGG
GAATTGAATTTGGACATCCTGAGTGGATCGGTTTTCCAAGGGCGATCAACATTTTCCTGGTGGGGCAATAA
Protein sequenceShow/hide protein sequence
MVTKNTSKNPDPPSLDASSSSHRSLNQRLTHVEASIGELNTRLLDVKSNMVGHTATMNNTITVYPIKNNSTMQFAAKNVGIIIKIFTGVINKIAKNIKDVTNEIAKNIKG
VIDVLKSFKKIHRTIYKGFKNDQEVHQDPSFKEINGLGLPLPFWRNSVFETIGHHLIRLITMGLGREGYLNFMGIEFGHPEWIGFPRAINIFLVGQ