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CaUC04G069560 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC04G069560
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionDUF4283 domain-containing protein
Genome locationCiama_Chr04:11700542..11700992
RNA-Seq ExpressionCaUC04G069560
SyntenyCaUC04G069560
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042316.1 DUF4283 domain-containing protein [Cucumis melo var. makuwa]1.5e-1246.81Show/hide
Query:  SAWFSLLYAPKSDELLFTPPKMVGDVVVVEPSEKVLNVGCSLWENSLVGQ-------FVMLHCLTH-IWGKVEMPTITLMKTGLIIFQFCKAES
        S W SL        L +TPPK +GD +VV P E+V+  G  +WENSLVG+       +V++H L   IWGK+EMPTIT+++  LI FQF  A+S
Subjt:  SAWFSLLYAPKSDELLFTPPKMVGDVVVVEPSEKVLNVGCSLWENSLVGQ-------FVMLHCLTH-IWGKVEMPTITLMKTGLIIFQFCKAES

KAA0046247.1 uncharacterized protein E6C27_scaffold284G00450 [Cucumis melo var. makuwa]4.7e-1445.74Show/hide
Query:  SAWFSLLYAPKSDELLFTPPKMVGDVVVVEPSEKVLNVGCSLWENSLVGQF--------VMLHCLTHIWGKVEMPTITLMKTGLIIFQFCKAES
        S W SL      + LL+T PK++GD +VV P EKV++ G  +WENSLVGQ         V+ H +  IWGK+EMP IT+++  LI FQF +++S
Subjt:  SAWFSLLYAPKSDELLFTPPKMVGDVVVVEPSEKVLNVGCSLWENSLVGQF--------VMLHCLTHIWGKVEMPTITLMKTGLIIFQFCKAES

TYK18951.1 uncharacterized protein E5676_scaffold418G00380 [Cucumis melo var. makuwa]1.4e-1344.68Show/hide
Query:  SAWFSLLYAPKSDELLFTPPKMVGDVVVVEPSEKVLNVGCSLWENSLVGQF--------VMLHCLTHIWGKVEMPTITLMKTGLIIFQFCKAES
        S W SL      + LL+T PK++GD +VV P E+V++ G  +WENSLVGQ         V+ H +  IWGK+EMP IT+++  LI FQF +++S
Subjt:  SAWFSLLYAPKSDELLFTPPKMVGDVVVVEPSEKVLNVGCSLWENSLVGQF--------VMLHCLTHIWGKVEMPTITLMKTGLIIFQFCKAES

XP_008463187.1 PREDICTED: uncharacterized protein LOC103501395 [Cucumis melo]1.4e-1344.68Show/hide
Query:  SAWFSLLYAPKSDELLFTPPKMVGDVVVVEPSEKVLNVGCSLWENSLVGQF--------VMLHCLTHIWGKVEMPTITLMKTGLIIFQFCKAES
        S W SL      + LL+T PK++GD +VV P E+V++ G  +WENSLVGQ         V+ H +  IWGK+EMP IT+++  LI FQF +++S
Subjt:  SAWFSLLYAPKSDELLFTPPKMVGDVVVVEPSEKVLNVGCSLWENSLVGQF--------VMLHCLTHIWGKVEMPTITLMKTGLIIFQFCKAES

XP_016903171.1 PREDICTED: uncharacterized protein LOC103502197 [Cucumis melo]1.5e-1246.81Show/hide
Query:  SAWFSLLYAPKSDELLFTPPKMVGDVVVVEPSEKVLNVGCSLWENSLVGQ-------FVMLHCLTH-IWGKVEMPTITLMKTGLIIFQFCKAES
        S W SL        L +TPPK +GD +VV P E+V+  G  +WENSLVG+       +V++H L   IWGK+EMPTIT+++  LI FQF  A+S
Subjt:  SAWFSLLYAPKSDELLFTPPKMVGDVVVVEPSEKVLNVGCSLWENSLVGQ-------FVMLHCLTH-IWGKVEMPTITLMKTGLIIFQFCKAES

TrEMBL top hitse value%identityAlignment
A0A1S3CJ11 uncharacterized protein LOC1035013956.6e-1444.68Show/hide
Query:  SAWFSLLYAPKSDELLFTPPKMVGDVVVVEPSEKVLNVGCSLWENSLVGQF--------VMLHCLTHIWGKVEMPTITLMKTGLIIFQFCKAES
        S W SL      + LL+T PK++GD +VV P E+V++ G  +WENSLVGQ         V+ H +  IWGK+EMP IT+++  LI FQF +++S
Subjt:  SAWFSLLYAPKSDELLFTPPKMVGDVVVVEPSEKVLNVGCSLWENSLVGQF--------VMLHCLTHIWGKVEMPTITLMKTGLIIFQFCKAES

A0A1S4E4L1 uncharacterized protein LOC1035021977.3e-1346.81Show/hide
Query:  SAWFSLLYAPKSDELLFTPPKMVGDVVVVEPSEKVLNVGCSLWENSLVGQ-------FVMLHCLTH-IWGKVEMPTITLMKTGLIIFQFCKAES
        S W SL        L +TPPK +GD +VV P E+V+  G  +WENSLVG+       +V++H L   IWGK+EMPTIT+++  LI FQF  A+S
Subjt:  SAWFSLLYAPKSDELLFTPPKMVGDVVVVEPSEKVLNVGCSLWENSLVGQ-------FVMLHCLTH-IWGKVEMPTITLMKTGLIIFQFCKAES

A0A5A7TK34 DUF4283 domain-containing protein7.3e-1346.81Show/hide
Query:  SAWFSLLYAPKSDELLFTPPKMVGDVVVVEPSEKVLNVGCSLWENSLVGQ-------FVMLHCLTH-IWGKVEMPTITLMKTGLIIFQFCKAES
        S W SL        L +TPPK +GD +VV P E+V+  G  +WENSLVG+       +V++H L   IWGK+EMPTIT+++  LI FQF  A+S
Subjt:  SAWFSLLYAPKSDELLFTPPKMVGDVVVVEPSEKVLNVGCSLWENSLVGQ-------FVMLHCLTH-IWGKVEMPTITLMKTGLIIFQFCKAES

A0A5A7TWG5 Reverse transcriptase domain-containing protein2.3e-1445.74Show/hide
Query:  SAWFSLLYAPKSDELLFTPPKMVGDVVVVEPSEKVLNVGCSLWENSLVGQF--------VMLHCLTHIWGKVEMPTITLMKTGLIIFQFCKAES
        S W SL      + LL+T PK++GD +VV P EKV++ G  +WENSLVGQ         V+ H +  IWGK+EMP IT+++  LI FQF +++S
Subjt:  SAWFSLLYAPKSDELLFTPPKMVGDVVVVEPSEKVLNVGCSLWENSLVGQF--------VMLHCLTHIWGKVEMPTITLMKTGLIIFQFCKAES

A0A5D3D5X6 Reverse transcriptase domain-containing protein6.6e-1444.68Show/hide
Query:  SAWFSLLYAPKSDELLFTPPKMVGDVVVVEPSEKVLNVGCSLWENSLVGQF--------VMLHCLTHIWGKVEMPTITLMKTGLIIFQFCKAES
        S W SL      + LL+T PK++GD +VV P E+V++ G  +WENSLVGQ         V+ H +  IWGK+EMP IT+++  LI FQF +++S
Subjt:  SAWFSLLYAPKSDELLFTPPKMVGDVVVVEPSEKVLNVGCSLWENSLVGQF--------VMLHCLTHIWGKVEMPTITLMKTGLIIFQFCKAES

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTGTTGGCGTTCGGTCCCGATGAATCAAGTGGGGTCCATAAGTTGCCGTCTGGGTCTCGCCTATTTAGGGTTGGTTCATGTCATGATGAAAGTCGGTCAA
CATTGGTTCTCCCTATTGTGTGCTCTGAAGTCTGATGAGTTGTTGTGTTACTCCGCCTGGTTCTCCCTATTGTATGCTCCGAAGTCTGATGAGTTGTTGTTTACT
CCGCCTAAGATGGTGGGAGATGTGGTGGTAGTTGAACCATCTGAGAAGGTGCTAAATGTGGGGTGTAGTCTATGGGAGAATTCTTTGGTTGGTCAATTTGTGATG
CTACATTGTCTTACCCATATATGGGGTAAGGTTGAGATGCCGACGATTACTTTAATGAAAACTGGCCTTATTATTTTCCAATTCTGCAAGGCAGAGTCAAGGGAC
TAA
mRNA sequenceShow/hide mRNA sequence
ATGGGTTGTTGGCGTTCGGTCCCGATGAATCAAGTGGGGTCCATAAGTTGCCGTCTGGGTCTCGCCTATTTAGGGTTGGTTCATGTCATGATGAAAGTCGGTCAA
CATTGGTTCTCCCTATTGTGTGCTCTGAAGTCTGATGAGTTGTTGTGTTACTCCGCCTGGTTCTCCCTATTGTATGCTCCGAAGTCTGATGAGTTGTTGTTTACT
CCGCCTAAGATGGTGGGAGATGTGGTGGTAGTTGAACCATCTGAGAAGGTGCTAAATGTGGGGTGTAGTCTATGGGAGAATTCTTTGGTTGGTCAATTTGTGATG
CTACATTGTCTTACCCATATATGGGGTAAGGTTGAGATGCCGACGATTACTTTAATGAAAACTGGCCTTATTATTTTCCAATTCTGCAAGGCAGAGTCAAGGGAC
TAA
Protein sequenceShow/hide protein sequence
MGCWRSVPMNQVGSISCRLGLAYLGLVHVMMKVGQHWFSLLCALKSDELLCYSAWFSLLYAPKSDELLFTPPKMVGDVVVVEPSEKVLNVGCSLWENSLVGQFVM
LHCLTHIWGKVEMPTITLMKTGLIIFQFCKAESRD