CuGenDBv2

Gene ID	CaUC04G070140
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	general transcription and DNA repair factor IIH subunit TFB1-1-like
Genome location	Ciama_Chr04:15533106..15551779
RNA-Seq Expression	CaUC04G070140
Synteny	CaUC04G070140
Gene Ontology terms	GO:0006289 - nucleotide-excision repair (biological process) GO:0006351 - transcription, DNA-templated (biological process) GO:0000439 - transcription factor TFIIH core complex (cellular component)
InterPro domains	IPR005607 - BSD domain IPR027079 - TFIIH subunit Tfb1/GTF2H1 IPR035925 - BSD domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_008457278.1 PREDICTED: probable RNA polymerase II transcription factor B subunit 1-1 isoform X1 [Cucumis melo]

2.5e-283

80.12

Show/hide

Query:  MGTKYVHKSAKYKTSVKDPGMPGVLEMTERKFVFRPSDPTSASKLDVEFRFIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALA
        MGTKYVHKSAKYKTSVKDPG PGVLEMTE KFVFRPSDPTSASKLDVEFRFIKGHKNTKEGSNKPPWLNLT+DQGGSYIFEFKNFSDLHVCREFVGSALA
Subjt:  MGTKYVHKSAKYKTSVKDPGMPGVLEMTERKFVFRPSDPTSASKLDVEFRFIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALA

Query:  KSGEAAQAAPSERPVAAFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERDSSKKSKQLIGFKSSMVLDTKPMSDGRTNKV
        K GEAAQ APSERPVAAFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERDSSKKSKQLIGFKSSMVLDTKPMSDGRTNKV
Subjt:  KSGEAAQAAPSERPVAAFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERDSSKKSKQLIGFKSSMVLDTKPMSDGRTNKV

Query:  TFNLTPEIKYQIFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDEILAAETRKKIRHVDPTLDLEADLGDDY
        TFNLTPEIKYQIFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDEILAA+TRKKIRHVDPTLDLEADLGDDY
Subjt:  TFNLTPEIKYQIFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDEILAAETRKKIRHVDPTLDLEADLGDDY

Query:  THLPDHGIFRDGGKEITESQNEHYKRTLSQDLNRQGAVVLEGRTIDIDLDDPRTVAEALVRSRHAVEGNEKQTALDRISRMTAIEDLQAPHSHPFAPLCI
        THLPDHGIFRDGGKEITESQNEHY+RTLSQDLNRQGAVVLEGRTID+DL+DPRTVAEALVRSRHAVEGNE+QTALDRISRMTAIEDLQAPHSHPFAPLCI
Subjt:  THLPDHGIFRDGGKEITESQNEHYKRTLSQDLNRQGAVVLEGRTIDIDLDDPRTVAEALVRSRHAVEGNEKQTALDRISRMTAIEDLQAPHSHPFAPLCI

Query:  KDPRDYFDAQQANAIKTLDDTRAGMQQTKCSLGTTEAYCSLRESISEIKSSGLKLPIIKPEVALMVKAPAAFSCQKHAFLLCIDNSSSATKLLILLLLNE
        KDPRDYFDAQQANAIKTLDDTRAGMQQTKCSL TTEAYCSLRESISEIKSSG   PIIKPEVALMV                +  + S+TK  +      
Subjt:  KDPRDYFDAQQANAIKTLDDTRAGMQQTKCSLGTTEAYCSLRESISEIKSSGLKLPIIKPEVALMVKAPAAFSCQKHAFLLCIDNSSSATKLLILLLLNE

Query:  GSGPLIDVKDTILASRGIRQWNTNNVEVGGRNTLLDFDTGMVGARLGCRISMRTDGLPCLIIRGCQLILYDSYWAYAAFLYGSPVLLLLVGMLFATQVSR
        G  P    +++IL S          +    +  LL                        + I+      + SY    ++LY              T+VSR
Subjt:  GSGPLIDVKDTILASRGIRQWNTNNVEVGGRNTLLDFDTGMVGARLGCRISMRTDGLPCLIIRGCQLILYDSYWAYAAFLYGSPVLLLLVGMLFATQVSR

Query:  LKDAMSKIYRQLEEIKETVLADFRHQVSLLVRPMHQALDAAFQHHDADLQKRSVKGGERPNGYT
        LKDAMSKIYRQLEEIKETV+ADFRHQVSLLVRPMHQALDAAFQHHDADLQKRSVK GER NGYT
Subjt:  LKDAMSKIYRQLEEIKETVLADFRHQVSLLVRPMHQALDAAFQHHDADLQKRSVKGGERPNGYT

XP_011653743.1 general transcription and DNA repair factor IIH subunit TFB1-1 isoform X2 [Cucumis sativus]

5.4e-278

78.77

Show/hide

Query:  MGTKYVHKSAKYKTSVKDPGMPGVLEMTERKFVFRPSDPTSASKLDVEFRFIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALA
        MGTKYVHKSAKYKTSVKDPG PGVLEMTE KFVFRPSDPTSASKLDVEFRFIKGHKNTKEGSNKPPWLNLT+DQGGSYIFEFKNFSDLHVCRE VGSALA
Subjt:  MGTKYVHKSAKYKTSVKDPGMPGVLEMTERKFVFRPSDPTSASKLDVEFRFIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALA

Query:  KSGEAAQAAPSERPVAAFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERDSSKKSKQLIGFKSSMVLDTKPMSDGRTNKV
        K GEAAQ APSERPVAAFPHEQLSK EMELRMRCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLE+D+SKKSKQLIGFKSSMVLDTKPMSDGRTNKV
Subjt:  KSGEAAQAAPSERPVAAFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERDSSKKSKQLIGFKSSMVLDTKPMSDGRTNKV

Query:  TFNLTPEIKYQIFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDEILAAETRKKIRHVDPTLDLEADLGDDY
        TFNLTPEIKYQIFALKPAVHQAFLNHVPNK+SEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDEILAAETRKKIRHVDPTLDLEADLGDDY
Subjt:  TFNLTPEIKYQIFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDEILAAETRKKIRHVDPTLDLEADLGDDY

Query:  THLPDHGIFRDGGKEITESQNEHYKRTLSQDLNRQGAVVLEGRTIDIDLDDPRTVAEALVRSRHAVEGNEKQTALDRISRMTAIEDLQAPHSHPFAPLCI
        THLPDHGIFRDGGKEITESQNEHY+RTLSQDLNRQGAVVLEGRTID+DL+DPRTVA+ALVRS+HAVEGNE QTALDRISRMTAIEDLQAPHSHPFAPLCI
Subjt:  THLPDHGIFRDGGKEITESQNEHYKRTLSQDLNRQGAVVLEGRTIDIDLDDPRTVAEALVRSRHAVEGNEKQTALDRISRMTAIEDLQAPHSHPFAPLCI

Query:  KDPRDYFDAQQANAIKTLDDTRAGMQQTKCSLGTTEAYCSLRESISEIKSSGLKLPIIKPEVALMVKAPAAFSCQKHAFLLCIDNSSSATKLLILLLLNE
        KDPRDYFDAQQANAIKTLDDTRAGMQQTKCSL TTEAY SLRESISEIKSSG   PIIKPEVALMV                +  + S+TK  +      
Subjt:  KDPRDYFDAQQANAIKTLDDTRAGMQQTKCSLGTTEAYCSLRESISEIKSSGLKLPIIKPEVALMVKAPAAFSCQKHAFLLCIDNSSSATKLLILLLLNE

Query:  GSGPLIDVKDTILASRGIRQWNTNNVEVGGRNTLLDFDTGMVGARLGCRISMRTDGLPCLIIRGCQLILYDSYWAYAAFLYGSPVLLLLVGMLFATQVSR
        G  P    +++IL S          +    +  LL                        + I+      + SY    ++LY              T+VSR
Subjt:  GSGPLIDVKDTILASRGIRQWNTNNVEVGGRNTLLDFDTGMVGARLGCRISMRTDGLPCLIIRGCQLILYDSYWAYAAFLYGSPVLLLLVGMLFATQVSR

Query:  LKDAMSKIYRQLEEIKETVLADFRHQVSLLVRPMHQALDAAFQHHDADLQKRSVKGGERPNGYT
        LKDAM+KIYRQLEEIKETV+ADFRHQVSLLVRPMHQALDAAFQHHDAD+QKRSVK GER NGYT
Subjt:  LKDAMSKIYRQLEEIKETVLADFRHQVSLLVRPMHQALDAAFQHHDADLQKRSVKGGERPNGYT

XP_031739948.1 general transcription and DNA repair factor IIH subunit TFB1-1 isoform X1 [Cucumis sativus]

5.8e-280

78.92

Show/hide

Query:  MGTKYVHKSAKYKTSVKDPGMPGVLEMTERKFVFRPSDPTSASKLDVEFRFIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALA
        MGTKYVHKSAKYKTSVKDPG PGVLEMTE KFVFRPSDPTSASKLDVEFRFIKGHKNTKEGSNKPPWLNLT+DQGGSYIFEFKNFSDLHVCRE VGSALA
Subjt:  MGTKYVHKSAKYKTSVKDPGMPGVLEMTERKFVFRPSDPTSASKLDVEFRFIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALA

Query:  KSGEAAQAAPSERPVAAFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERDSSKKSKQLIGFKSSMVLDTKPMSDGRTNKV
        K GEAAQ APSERPVAAFPHEQLSK EMELRMRCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLE+D+SKKSKQLIGFKSSMVLDTKPMSDGRTNKV
Subjt:  KSGEAAQAAPSERPVAAFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERDSSKKSKQLIGFKSSMVLDTKPMSDGRTNKV

Query:  TFNLTPEIKYQIFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDEILAAETRKKIRHVDPTLDLEADLGDDY
        TFNLTPEIKYQIFALKPAVHQAFLNHVPNK+SEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDEILAAETRKKIRHVDPTLDLEADLGDDY
Subjt:  TFNLTPEIKYQIFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDEILAAETRKKIRHVDPTLDLEADLGDDY

Query:  THLPDHGIFRDGGKEITESQNEHYKRTLSQDLNRQGAVVLEGRTIDIDLDDPRTVAEALVRSRHAVEGNEKQTALDRISRMTAIEDLQAPHSHPFAPLCI
        THLPDHGIFRDGGKEITESQNEHY+RTLSQDLNRQGAVVLEGRTID+DL+DPRTVA+ALVRS+HAVEGNE QTALDRISRMTAIEDLQAPHSHPFAPLCI
Subjt:  THLPDHGIFRDGGKEITESQNEHYKRTLSQDLNRQGAVVLEGRTIDIDLDDPRTVAEALVRSRHAVEGNEKQTALDRISRMTAIEDLQAPHSHPFAPLCI

Query:  KDPRDYFDAQQANAIKTLDDTRAGMQQTKCSLGTTEAYCSLRESISEIKSSGLKLPIIKPEVALMVKAPAAFSCQKHAFLLCIDNSSSATKLLILLLLNE
        KDPRDYFDAQQANAIKTLDDTRAGMQQTKCSL TTEAY SLRESISEIKSSG   PIIKPEVALMV                +  + S+TK  +      
Subjt:  KDPRDYFDAQQANAIKTLDDTRAGMQQTKCSLGTTEAYCSLRESISEIKSSGLKLPIIKPEVALMVKAPAAFSCQKHAFLLCIDNSSSATKLLILLLLNE

Query:  GSGPLIDVKDTILASRGIRQWNTNNVEVGGRNTLLDFDTGMVGARLGCRISMRTDGLPCLIIRGCQLILYDSYWAYAAFLYGSPVLLLLVGMLFATQVSR
        G  P    +++IL S          +    +  LL                        + I+      + SY    ++LY   + +  +   F T+VSR
Subjt:  GSGPLIDVKDTILASRGIRQWNTNNVEVGGRNTLLDFDTGMVGARLGCRISMRTDGLPCLIIRGCQLILYDSYWAYAAFLYGSPVLLLLVGMLFATQVSR

Query:  LKDAMSKIYRQLEEIKETVLADFRHQVSLLVRPMHQALDAAFQHHDADLQKRSVKGGERPNGYT
        LKDAM+KIYRQLEEIKETV+ADFRHQVSLLVRPMHQALDAAFQHHDAD+QKRSVK GER NGYT
Subjt:  LKDAMSKIYRQLEEIKETVLADFRHQVSLLVRPMHQALDAAFQHHDADLQKRSVKGGERPNGYT

XP_038894178.1 general transcription and DNA repair factor IIH subunit TFB1-1-like isoform X1 [Benincasa hispida]

2.5e-283

80.27

Show/hide

Query:  MGTKYVHKSAKYKTSVKDPGMPGVLEMTERKFVFRPSDPTSASKLDVEFRFIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALA
        MGTKYVHKSAKYKTS+KDPG PGVLEMTE KF+FRPSDPTSASKLDVEFRFIKGHKNTKEGSNKPPWLNLTRDQGGS IFEFKNFSDLHVCREFVGSALA
Subjt:  MGTKYVHKSAKYKTSVKDPGMPGVLEMTERKFVFRPSDPTSASKLDVEFRFIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALA

Query:  KSGEAAQAAPSERPVAAFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERDSSKKSKQLIGFKSSMVLDTKPMSDGRTNKV
        KSGEAAQ AP ERPVAAFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERD+SKKSKQLIGFKSSMVLDTKPMSDGRTNKV
Subjt:  KSGEAAQAAPSERPVAAFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERDSSKKSKQLIGFKSSMVLDTKPMSDGRTNKV

Query:  TFNLTPEIKYQIFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDEILAAETRKKIRHVDPTLDLEADLGDDY
        TFNLTPEIKYQIFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDEILAAE RKKIRHVDPTLDLEADLGDDY
Subjt:  TFNLTPEIKYQIFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDEILAAETRKKIRHVDPTLDLEADLGDDY

Query:  THLPDHGIFRDGGKEITESQNEHYKRTLSQDLNRQGAVVLEGRTIDIDLDDPRTVAEALVRSRHAVEGNEKQTALDRISRMTAIEDLQAPHSHPFAPLCI
        THLPDHGIFRDGGKEITESQNEHY+RTLSQDLNRQGAVVLEGRTID+DL+DPRTVAEALV+SRHAVEGNEKQTALDRISRMTAIEDLQ PHSHPFAPLCI
Subjt:  THLPDHGIFRDGGKEITESQNEHYKRTLSQDLNRQGAVVLEGRTIDIDLDDPRTVAEALVRSRHAVEGNEKQTALDRISRMTAIEDLQAPHSHPFAPLCI

Query:  KDPRDYFDAQQANAIKTLDDTRAGMQQTKCSLGTTEAYCSLRESISEIKSSGLKLPIIKPEVALMVKAPAAFSCQKHAFLLCIDNSSSATKLLILLLLNE
        KDPRDYFDAQQANAIKTLDDTRAGMQQTKCSL TTEAYCSLRESISEIKSSGL  PIIKPEVALMV                +  + S+TK  +      
Subjt:  KDPRDYFDAQQANAIKTLDDTRAGMQQTKCSLGTTEAYCSLRESISEIKSSGLKLPIIKPEVALMVKAPAAFSCQKHAFLLCIDNSSSATKLLILLLLNE

Query:  GSGPLIDVKDTILASRGIRQWNTNNVEVGGRNTLLDFDTGMVGARLGCRISMRTDGLPCLIIRGCQLILYDSYWAYAAFLYGSPVLLLLVGMLFATQVSR
        G  P    +++IL S      N    E+                 L   IS++       ++R      + SY    ++LY              T+VSR
Subjt:  GSGPLIDVKDTILASRGIRQWNTNNVEVGGRNTLLDFDTGMVGARLGCRISMRTDGLPCLIIRGCQLILYDSYWAYAAFLYGSPVLLLLVGMLFATQVSR

Query:  LKDAMSKIYRQLEEIKETVLADFRHQVSLLVRPMHQALDAAFQHHDADLQKRSVKGGERPNGYT
        LKDAMSKIYRQLEEIKETV+ADFRHQVSLLVRPMHQALDAAFQHHDADLQKRSVK GERPNGYT
Subjt:  LKDAMSKIYRQLEEIKETVLADFRHQVSLLVRPMHQALDAAFQHHDADLQKRSVKGGERPNGYT

XP_038894195.1 general transcription and DNA repair factor IIH subunit TFB1-1-like isoform X3 [Benincasa hispida]

1.7e-279

79.22

Show/hide

Query:  MGTKYVHKSAKYKTSVKDPGMPGVLEMTERKFVFRPSDPTSASKLDVEFRFIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALA
        MGTKYVHKSAKYKTS+KDPG PGVLEMTE KF+FRPSDPTSASKLDVEFRFIKGHKNTKEGSNKPPWLNLTRDQGGS IFEFKNFSDLHVCREFVGSALA
Subjt:  MGTKYVHKSAKYKTSVKDPGMPGVLEMTERKFVFRPSDPTSASKLDVEFRFIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALA

Query:  KSGEAAQAAPSERPVAAFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERDSSKKSKQLIGFKSSMVLDTKPMSDGRTNKV
        KSGEAAQ AP ERPVAAFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERD+SKKSKQLIGFKSSMVLDTKPMSDGRTNKV
Subjt:  KSGEAAQAAPSERPVAAFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERDSSKKSKQLIGFKSSMVLDTKPMSDGRTNKV

Query:  TFNLTPEIKYQIFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDEILAAETRKKIRHVDPTLDLEADLGDDY
        TFNLTPEIKYQIFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDEILAAE RKKIRHVDPTLDLEADLGDDY
Subjt:  TFNLTPEIKYQIFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDEILAAETRKKIRHVDPTLDLEADLGDDY

Query:  THLPDHGIFRDGGKEITESQNEHYKRTLSQDLNRQGAVVLEGRTIDIDLDDPRTVAEALVRSRHAVEGNEKQTALDRISRMTAIEDLQAPHSHPFAPLCI
        THLPDHGIFRDGGKEITESQNEHY+RTLSQDLNRQGAVVLEGRTID+DL+DPRTVAEALV+SRHAVEGNEKQTALDRISRMTAIEDLQ PHSHPFAPLCI
Subjt:  THLPDHGIFRDGGKEITESQNEHYKRTLSQDLNRQGAVVLEGRTIDIDLDDPRTVAEALVRSRHAVEGNEKQTALDRISRMTAIEDLQAPHSHPFAPLCI

Query:  KDPRDYFDAQQANAIKTLDDTRAGMQQTKCSLGTTEAYCSLRESISEIKSSGLKLPIIKPEVALMVKAPAAFSCQKHAFLLCIDNSSSATKLLILLLLNE
        KDPRDYFDAQQANAIKTLDDTRAGMQQTKCSL TTEAYCSLRESISEIKSSGL  PIIKPEVALMV                +  + S+TK  +      
Subjt:  KDPRDYFDAQQANAIKTLDDTRAGMQQTKCSLGTTEAYCSLRESISEIKSSGLKLPIIKPEVALMVKAPAAFSCQKHAFLLCIDNSSSATKLLILLLLNE

Query:  GSGPLIDVKDTILASRGIRQWNTNNVEVGGRNTLLDFDTGMVGARLGCRISMRTDGLPCLIIRGCQLILYDSYWAYAAFLYGSPVLLLLVGMLFATQVSR
        G  P    +++IL S                                         LP                        +P    L+       VSR
Subjt:  GSGPLIDVKDTILASRGIRQWNTNNVEVGGRNTLLDFDTGMVGARLGCRISMRTDGLPCLIIRGCQLILYDSYWAYAAFLYGSPVLLLLVGMLFATQVSR

Query:  LKDAMSKIYRQLEEIKETVLADFRHQVSLLVRPMHQALDAAFQHHDADLQKRSVKGGERPNGYT
        LKDAMSKIYRQLEEIKETV+ADFRHQVSLLVRPMHQALDAAFQHHDADLQKRSVK GERPNGYT
Subjt:  LKDAMSKIYRQLEEIKETVLADFRHQVSLLVRPMHQALDAAFQHHDADLQKRSVKGGERPNGYT

TrEMBL top hits

e value

%identity

Alignment

A0A1S3C6E8 probable RNA polymerase II transcription factor B subunit 1-1 isoform X1

1.2e-283

80.12

Show/hide

Query:  MGTKYVHKSAKYKTSVKDPGMPGVLEMTERKFVFRPSDPTSASKLDVEFRFIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALA
        MGTKYVHKSAKYKTSVKDPG PGVLEMTE KFVFRPSDPTSASKLDVEFRFIKGHKNTKEGSNKPPWLNLT+DQGGSYIFEFKNFSDLHVCREFVGSALA
Subjt:  MGTKYVHKSAKYKTSVKDPGMPGVLEMTERKFVFRPSDPTSASKLDVEFRFIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALA

Query:  KSGEAAQAAPSERPVAAFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERDSSKKSKQLIGFKSSMVLDTKPMSDGRTNKV
        K GEAAQ APSERPVAAFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERDSSKKSKQLIGFKSSMVLDTKPMSDGRTNKV
Subjt:  KSGEAAQAAPSERPVAAFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERDSSKKSKQLIGFKSSMVLDTKPMSDGRTNKV

Query:  TFNLTPEIKYQIFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDEILAAETRKKIRHVDPTLDLEADLGDDY
        TFNLTPEIKYQIFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDEILAA+TRKKIRHVDPTLDLEADLGDDY
Subjt:  TFNLTPEIKYQIFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDEILAAETRKKIRHVDPTLDLEADLGDDY

Query:  THLPDHGIFRDGGKEITESQNEHYKRTLSQDLNRQGAVVLEGRTIDIDLDDPRTVAEALVRSRHAVEGNEKQTALDRISRMTAIEDLQAPHSHPFAPLCI
        THLPDHGIFRDGGKEITESQNEHY+RTLSQDLNRQGAVVLEGRTID+DL+DPRTVAEALVRSRHAVEGNE+QTALDRISRMTAIEDLQAPHSHPFAPLCI
Subjt:  THLPDHGIFRDGGKEITESQNEHYKRTLSQDLNRQGAVVLEGRTIDIDLDDPRTVAEALVRSRHAVEGNEKQTALDRISRMTAIEDLQAPHSHPFAPLCI

Query:  KDPRDYFDAQQANAIKTLDDTRAGMQQTKCSLGTTEAYCSLRESISEIKSSGLKLPIIKPEVALMVKAPAAFSCQKHAFLLCIDNSSSATKLLILLLLNE
        KDPRDYFDAQQANAIKTLDDTRAGMQQTKCSL TTEAYCSLRESISEIKSSG   PIIKPEVALMV                +  + S+TK  +      
Subjt:  KDPRDYFDAQQANAIKTLDDTRAGMQQTKCSLGTTEAYCSLRESISEIKSSGLKLPIIKPEVALMVKAPAAFSCQKHAFLLCIDNSSSATKLLILLLLNE

Query:  GSGPLIDVKDTILASRGIRQWNTNNVEVGGRNTLLDFDTGMVGARLGCRISMRTDGLPCLIIRGCQLILYDSYWAYAAFLYGSPVLLLLVGMLFATQVSR
        G  P    +++IL S          +    +  LL                        + I+      + SY    ++LY              T+VSR
Subjt:  GSGPLIDVKDTILASRGIRQWNTNNVEVGGRNTLLDFDTGMVGARLGCRISMRTDGLPCLIIRGCQLILYDSYWAYAAFLYGSPVLLLLVGMLFATQVSR

Query:  LKDAMSKIYRQLEEIKETVLADFRHQVSLLVRPMHQALDAAFQHHDADLQKRSVKGGERPNGYT
        LKDAMSKIYRQLEEIKETV+ADFRHQVSLLVRPMHQALDAAFQHHDADLQKRSVK GER NGYT
Subjt:  LKDAMSKIYRQLEEIKETVLADFRHQVSLLVRPMHQALDAAFQHHDADLQKRSVKGGERPNGYT

A0A6J1DNY2 probable RNA polymerase II transcription factor B subunit 1-1 isoform X2

1.1e-268

76.66

Show/hide

Query:  MGTKYVHKSAKYKTSVKDPGMPGVLEMTERKFVFRPSDPTSASKLDVEFRFIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALA
        MGTKYV KSAKYKTSVKDPG PGVLEMTERKFVF+PSDPTSASKLDVEFR+IKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALA
Subjt:  MGTKYVHKSAKYKTSVKDPGMPGVLEMTERKFVFRPSDPTSASKLDVEFRFIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALA

Query:  KSGEAAQAAPSERPVAAFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERDSSKKSKQLIGFKSSMVLDTKPMSDGRTNKV
        KSGE AQA+ SER VA FPHEQLSK EMELRM+CLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERD+SKKSKQL+GFK+SMVLDTKPMSDGRTNKV
Subjt:  KSGEAAQAAPSERPVAAFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERDSSKKSKQLIGFKSSMVLDTKPMSDGRTNKV

Query:  TFNLTPEIKYQIFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDEILAAETRKKIRHVDPTLDLEADLGDDY
        TFNLTPEIKY+IFALKPAVHQAFL+HVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDEILAAETRKKIRHVDPTLDLEADLGDDY
Subjt:  TFNLTPEIKYQIFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDEILAAETRKKIRHVDPTLDLEADLGDDY

Query:  THLPDHGIFRDGGKEITESQNEHYKRTLSQDLNRQGAVVLEGRTIDIDLDDPRTVAEALVRSRHAVEGNEKQTALDRISRMTAIEDLQAPHSHPFAPLCI
        THLPDHGIFRDGGKEITES NE Y+RTLSQDLNRQGAVVLEGRTID+DL+DPRTVAEALVRSRH VEGNEKQTALDRISRMTAIEDLQAPHSHPFAPLCI
Subjt:  THLPDHGIFRDGGKEITESQNEHYKRTLSQDLNRQGAVVLEGRTIDIDLDDPRTVAEALVRSRHAVEGNEKQTALDRISRMTAIEDLQAPHSHPFAPLCI

Query:  KDPRDYFDAQQANAIKTLDDTRAGMQQTKCSLGTTEAYCSLRESISEIKSSGLKLPIIKPEVALMVKAPAAFSCQKHAFLLCIDNSSSATKLLILLLLNE
        KDPRDYFDAQQANAIKTLDDTRAGMQQTKCSL T EAYCSLRE ISEIKSSGL  PIIKPEVALMV                +  + S+TK  +      
Subjt:  KDPRDYFDAQQANAIKTLDDTRAGMQQTKCSLGTTEAYCSLRESISEIKSSGLKLPIIKPEVALMVKAPAAFSCQKHAFLLCIDNSSSATKLLILLLLNE

Query:  GSGPLIDVKDTILASRGIRQWNTNNVEVGGRNTLLDFDTGMVGARLGCRISMRTDGLPCLIIRGCQLILYDSYWAYAAFLYGSPVLLLLVGMLFATQVSR
        G  P    +++IL S          +    ++ LL                        + I+      + SY    ++LY              T+VSR
Subjt:  GSGPLIDVKDTILASRGIRQWNTNNVEVGGRNTLLDFDTGMVGARLGCRISMRTDGLPCLIIRGCQLILYDSYWAYAAFLYGSPVLLLLVGMLFATQVSR

Query:  LKDAMSKIYRQLEEIKETVLADFRHQVSLLVRPMHQALDAAFQHHDADLQKRSVKGGERPNGYT
        LKDAMSKIYRQLEEIKETV ADFR          HQALDAAFQHHDADLQKRS K GERPNGYT
Subjt:  LKDAMSKIYRQLEEIKETVLADFRHQVSLLVRPMHQALDAAFQHHDADLQKRSVKGGERPNGYT

A0A6J1DRT9 probable RNA polymerase II transcription factor B subunit 1-1 isoform X1

6.5e-277

78.16

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Query:  MGTKYVHKSAKYKTSVKDPGMPGVLEMTERKFVFRPSDPTSASKLDVEFRFIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALA
        MGTKYV KSAKYKTSVKDPG PGVLEMTERKFVF+PSDPTSASKLDVEFR+IKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALA
Subjt:  MGTKYVHKSAKYKTSVKDPGMPGVLEMTERKFVFRPSDPTSASKLDVEFRFIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALA

Query:  KSGEAAQAAPSERPVAAFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERDSSKKSKQLIGFKSSMVLDTKPMSDGRTNKV
        KSGE AQA+ SER VA FPHEQLSK EMELRM+CLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERD+SKKSKQL+GFK+SMVLDTKPMSDGRTNKV
Subjt:  KSGEAAQAAPSERPVAAFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERDSSKKSKQLIGFKSSMVLDTKPMSDGRTNKV

Query:  TFNLTPEIKYQIFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDEILAAETRKKIRHVDPTLDLEADLGDDY
        TFNLTPEIKY+IFALKPAVHQAFL+HVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDEILAAETRKKIRHVDPTLDLEADLGDDY
Subjt:  TFNLTPEIKYQIFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDEILAAETRKKIRHVDPTLDLEADLGDDY

Query:  THLPDHGIFRDGGKEITESQNEHYKRTLSQDLNRQGAVVLEGRTIDIDLDDPRTVAEALVRSRHAVEGNEKQTALDRISRMTAIEDLQAPHSHPFAPLCI
        THLPDHGIFRDGGKEITES NE Y+RTLSQDLNRQGAVVLEGRTID+DL+DPRTVAEALVRSRH VEGNEKQTALDRISRMTAIEDLQAPHSHPFAPLCI
Subjt:  THLPDHGIFRDGGKEITESQNEHYKRTLSQDLNRQGAVVLEGRTIDIDLDDPRTVAEALVRSRHAVEGNEKQTALDRISRMTAIEDLQAPHSHPFAPLCI

Query:  KDPRDYFDAQQANAIKTLDDTRAGMQQTKCSLGTTEAYCSLRESISEIKSSGLKLPIIKPEVALMVKAPAAFSCQKHAFLLCIDNSSSATKLLILLLLNE
        KDPRDYFDAQQANAIKTLDDTRAGMQQTKCSL T EAYCSLRE ISEIKSSGL  PIIKPEVALMV                +  + S+TK  +      
Subjt:  KDPRDYFDAQQANAIKTLDDTRAGMQQTKCSLGTTEAYCSLRESISEIKSSGLKLPIIKPEVALMVKAPAAFSCQKHAFLLCIDNSSSATKLLILLLLNE

Query:  GSGPLIDVKDTILASRGIRQWNTNNVEVGGRNTLLDFDTGMVGARLGCRISMRTDGLPCLIIRGCQLILYDSYWAYAAFLYGSPVLLLLVGMLFATQVSR
        G  P    +++IL S          +    ++ LL                        + I+      + SY    ++LY              T+VSR
Subjt:  GSGPLIDVKDTILASRGIRQWNTNNVEVGGRNTLLDFDTGMVGARLGCRISMRTDGLPCLIIRGCQLILYDSYWAYAAFLYGSPVLLLLVGMLFATQVSR

Query:  LKDAMSKIYRQLEEIKETVLADFRHQVSLLVRPMHQALDAAFQHHDADLQKRSVKGGERPNGYT
        LKDAMSKIYRQLEEIKETV ADFRHQVSLLVRPMHQALDAAFQHHDADLQKRS K GERPNGYT
Subjt:  LKDAMSKIYRQLEEIKETVLADFRHQVSLLVRPMHQALDAAFQHHDADLQKRSVKGGERPNGYT

A0A6J1EXP7 probable RNA polymerase II transcription factor B subunit 1-1

8.5e-277

79.07

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Query:  MGTKYVHKSAKYKTSVKDPGMPGVLEMTERKFVFRPSDPTSASKLDVEFRFIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALA
        MGTKYV KSAKYKTSVKDPG PGVLEMTERKFVFRPSDPTSASKLDVEFRFIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALA
Subjt:  MGTKYVHKSAKYKTSVKDPGMPGVLEMTERKFVFRPSDPTSASKLDVEFRFIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALA

Query:  KSGEAAQAAPSERPVAAFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERDSSKKSKQLIGFKSSMVLDTKPMSDGRTNKV
        KSGEA Q APSE+ VA FPHEQLSKSEMELRMRCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERD S KSKQL+GFKSSMVLDTKPMSDGRTNKV
Subjt:  KSGEAAQAAPSERPVAAFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERDSSKKSKQLIGFKSSMVLDTKPMSDGRTNKV

Query:  TFNLTPEIKYQIFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDEILAAETRKKIRHVDPTLDLEADLGDDY
        TFNLTPEIKYQIFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDEILAAETRKKIR VDPTLDLEADLGDDY
Subjt:  TFNLTPEIKYQIFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDEILAAETRKKIRHVDPTLDLEADLGDDY

Query:  THLPDHGIFRDGGKEITESQNEHYKRTLSQDLNRQGAVVLEGRTIDIDLDDPRTVAEALVRSRHAVEGNEKQTALDRISRMTAIEDLQAPHSHPFAPLCI
        THLPDHGIFRDGGKEITES NE  +RTLSQDLNRQGAVVLEGRTID+DL+DPRTVAEALVRSRHAVEGNEKQ  LDRI+RMTAIEDLQAPHS+PFAPLCI
Subjt:  THLPDHGIFRDGGKEITESQNEHYKRTLSQDLNRQGAVVLEGRTIDIDLDDPRTVAEALVRSRHAVEGNEKQTALDRISRMTAIEDLQAPHSHPFAPLCI

Query:  KDPRDYFDAQQANAIKTLDDTRAGMQQTKCSLGTTEAYCSLRESISEIKSSGLKLPIIKPEVALMVKAPAAFSCQKHAFLLCIDNSSSATKLLILLLLNE
        KDPRDYFDAQQANAIKTLDDTRAGMQQTKCSL TTEAYCSLRESISEIKSSGL  PIIKPEVALMV                +  + S+TK  +      
Subjt:  KDPRDYFDAQQANAIKTLDDTRAGMQQTKCSLGTTEAYCSLRESISEIKSSGLKLPIIKPEVALMVKAPAAFSCQKHAFLLCIDNSSSATKLLILLLLNE

Query:  GSGPLIDVKDTILASRGIRQWNTNNVEVGGRNTLLDFDTGMVGARLGCRISMRTDGLPCLIIRGCQLILYDSYWAYAAFLYGSPVLLLLVGMLFATQVSR
        G  P    +++IL S      N    E+                 L   IS++       ++R      + SY    ++LY              T+VSR
Subjt:  GSGPLIDVKDTILASRGIRQWNTNNVEVGGRNTLLDFDTGMVGARLGCRISMRTDGLPCLIIRGCQLILYDSYWAYAAFLYGSPVLLLLVGMLFATQVSR

Query:  LKDAMSKIYRQLEEIKETVLADFRHQVSLLVRPMHQALDAAFQHHDADLQKRSVKGGERPNGYT
        LKDAMSKIYRQLEEIKETV ADFRHQVSLLVRPMHQALDAAFQHHDADLQKRS K GERPNGYT
Subjt:  LKDAMSKIYRQLEEIKETVLADFRHQVSLLVRPMHQALDAAFQHHDADLQKRSVKGGERPNGYT

A0A6J1IB04 probable RNA polymerase II transcription factor B subunit 1-1

1.6e-275

78.77

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Query:  MGTKYVHKSAKYKTSVKDPGMPGVLEMTERKFVFRPSDPTSASKLDVEFRFIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALA
        MGTKYV KSAKYKTSVKDPG PGVLEMTERKFVFRPSDPTSASKLDVEFRFIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALA
Subjt:  MGTKYVHKSAKYKTSVKDPGMPGVLEMTERKFVFRPSDPTSASKLDVEFRFIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALA

Query:  KSGEAAQAAPSERPVAAFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERDSSKKSKQLIGFKSSMVLDTKPMSDGRTNKV
        KSGEA Q APSE+ VA FPHEQLSKSEMELRMRCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERD S KSKQL+GFKSSMVLDTKPMSDGRTNKV
Subjt:  KSGEAAQAAPSERPVAAFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERDSSKKSKQLIGFKSSMVLDTKPMSDGRTNKV

Query:  TFNLTPEIKYQIFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDEILAAETRKKIRHVDPTLDLEADLGDDY
        TFNLTPEIKYQIFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDEILAAETRKKIR VDPTLDLEADLGDDY
Subjt:  TFNLTPEIKYQIFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDEILAAETRKKIRHVDPTLDLEADLGDDY

Query:  THLPDHGIFRDGGKEITESQNEHYKRTLSQDLNRQGAVVLEGRTIDIDLDDPRTVAEALVRSRHAVEGNEKQTALDRISRMTAIEDLQAPHSHPFAPLCI
         HLPDHGIFRDGGKEITES NE  +RTLSQDLNRQGAVVLEGRTID+DL+DPRTVAEALVRSRHAVEG+EKQ  LDRI+RMTAIEDLQAPHS+PFAPLCI
Subjt:  THLPDHGIFRDGGKEITESQNEHYKRTLSQDLNRQGAVVLEGRTIDIDLDDPRTVAEALVRSRHAVEGNEKQTALDRISRMTAIEDLQAPHSHPFAPLCI

Query:  KDPRDYFDAQQANAIKTLDDTRAGMQQTKCSLGTTEAYCSLRESISEIKSSGLKLPIIKPEVALMVKAPAAFSCQKHAFLLCIDNSSSATKLLILLLLNE
        KDPRDYFDAQQANAIKTLDDTRAGMQQTKCSL TTEAYCSLRESISEIKSSGL  PIIKPEVALMV                +  + S+TK  +      
Subjt:  KDPRDYFDAQQANAIKTLDDTRAGMQQTKCSLGTTEAYCSLRESISEIKSSGLKLPIIKPEVALMVKAPAAFSCQKHAFLLCIDNSSSATKLLILLLLNE

Query:  GSGPLIDVKDTILASRGIRQWNTNNVEVGGRNTLLDFDTGMVGARLGCRISMRTDGLPCLIIRGCQLILYDSYWAYAAFLYGSPVLLLLVGMLFATQVSR
        G  P    +++IL S      N    E+                 L   IS++       ++R      + SY    ++LY              T+VSR
Subjt:  GSGPLIDVKDTILASRGIRQWNTNNVEVGGRNTLLDFDTGMVGARLGCRISMRTDGLPCLIIRGCQLILYDSYWAYAAFLYGSPVLLLLVGMLFATQVSR

Query:  LKDAMSKIYRQLEEIKETVLADFRHQVSLLVRPMHQALDAAFQHHDADLQKRSVKGGERPNGYT
        LKDAMSKIYRQLEEIKETV ADFRHQVSLLVRPMHQALDAAFQHHDADLQKRS K GERPNGYT
Subjt:  LKDAMSKIYRQLEEIKETVLADFRHQVSLLVRPMHQALDAAFQHHDADLQKRSVKGGERPNGYT

SwissProt top hits

e value

%identity

Alignment

P32780 General transcription factor IIH subunit 1

4.1e-18

29.57

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Query:  IKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALAKSGEAAQAAPSERPVAAFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVIG
        IK  K + EG  K   L L    G +  F F N S     R+ V   L       Q  P          ++ +  E+E + R LQED  L +L+K  V+ 
Subjt:  IKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALAKSGEAAQAAPSERPVAAFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVIG

Query:  GVLTESEFWAARKKLLERDSSKKS--KQLIGFKSSMVLDTKPMSDGRTNKVTFNLTPEIKYQIFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHST
         V++  EFWA R  +   DSS  S  KQ +G  ++ + D +P +DG  N + +NLT +I   IF   PAV   +  +VP+ M+EK+FWT++F++ Y H  
Subjt:  GVLTESEFWAARKKLLERDSSKKS--KQLIGFKSSMVLDTKPMSDGRTNKVTFNLTPEIKYQIFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHST

Query:  KNSIAAA---AEAAEDEELALFLKDDEILAAETRKKIRHVDPTLDLEA------DLGDDYTHLP----DHGIFRDGGKEITESQNEHYKRTLSQDLNRQG
        + +  +    AE A+ +E  L          +T   +   +P LDL A      D G   + +P       I  +    I +  N H    L+  L +Q 
Subjt:  KNSIAAA---AEAAEDEELALFLKDDEILAAETRKKIRHVDPTLDLEA------DLGDDYTHLP----DHGIFRDGGKEITESQNEHYKRTLSQDLNRQG

Query:  A
        A
Subjt:  A

Q3ECP0 General transcription and DNA repair factor IIH subunit TFB1-1

7.4e-161

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Query:  VHKSAKYKTSVKDPGMPGVLEMTERKFVFRPSDPTSASKLDVEFRFIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALAKSGEA
        + K  KYK++VKDPG PG L + E   +F P+DP S SKL V  + IK  K TKEGSNKPPWLNLT  Q  S+IFEF+N+ D+H CR+F+  ALAK    
Subjt:  VHKSAKYKTSVKDPGMPGVLEMTERKFVFRPSDPTSASKLDVEFRFIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALAKSGEA

Query:  AQAAPSERPVAAFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERDSSKKSKQLIGFKSSMVLDTKPMSDGRTNKVTFNLT
         +  P+ + V +   EQLS  E+ELR + L+E+SELQ+LHKQFV   VLTE EFWA RKKLL +DS +KSKQ +G KS MV   KP +DGRTN+VTFNLT
Subjt:  AQAAPSERPVAAFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERDSSKKSKQLIGFKSSMVLDTKPMSDGRTNKVTFNLT

Query:  PEIKYQIFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDEILAAETRKKIRHVDPTLDLEADLGDDYTHLPD
        PEI +QIFA KPAV QAF+N+VP+KM+EKDFWTKYFRAEYL+STKN+  AAAEAAEDEELA+FLK DEILA ETR KIR VDPTLD+EAD GDDYTHL D
Subjt:  PEIKYQIFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDEILAAETRKKIRHVDPTLDLEADLGDDYTHLPD

Query:  HGIFRDGGKEITESQNEHYKRTLSQDLNRQGAVVLEGRTIDIDLDDPRTVAEALVRSRHAVEG------NEKQTALDRISRMTAIEDLQAPHSHPFAPLC
        HGI RDG  ++ E QN+ +KR+L QDLNR  AVVLEGR+ID++ +D R VAEAL R +   +       +  Q  L+R+SR+  +EDLQAP + P APL 
Subjt:  HGIFRDGGKEITESQNEHYKRTLSQDLNRQGAVVLEGRTIDIDLDDPRTVAEALVRSRHAVEG------NEKQTALDRISRMTAIEDLQAPHSHPFAPLC

Query:  IKDPRDYFDAQQANAIKTLDDTRAGMQQTKCSLGTTEAYCSLRESISEIKSSGLKLPIIKPEVALMVKAPAAFSCQKHAFLLCIDNSSSATKLLILLLLN
        IKDPRDYF++QQ N +      + G+++        EAY  L+ESI EI+++GL  P+IKPEV+  V                    SS T+ +      
Subjt:  IKDPRDYFDAQQANAIKTLDDTRAGMQQTKCSLGTTEAYCSLRESISEIKSSGLKLPIIKPEVALMVKAPAAFSCQKHAFLLCIDNSSSATKLLILLLLN

Query:  EGSGPLIDVKDTILASRGIRQWNTNNVEVGGRNTLLDFDTGMVGARLGCRISMRTDGLPCLIIRGCQLILYDSYWAYAAFLYGSPVLLLLVGMLFATQVS
         G  P     D +  S               ++ +L   T                      I+      + SY     +L+              T+V 
Subjt:  EGSGPLIDVKDTILASRGIRQWNTNNVEVGGRNTLLDFDTGMVGARLGCRISMRTDGLPCLIIRGCQLILYDSYWAYAAFLYGSPVLLLLVGMLFATQVS

Query:  RLKDAMSKIYRQLEEIKETVLADFRHQVSLLVRPMHQALDAAFQHHDADLQKRSVKGGERPNGY
        +LKDAMS  Y +LE +KE+V +D RHQVSLLVRPM QALDAAF H++ DLQ+R+ K GERPNGY
Subjt:  RLKDAMSKIYRQLEEIKETVLADFRHQVSLLVRPMHQALDAAFQHHDADLQKRSVKGGERPNGY

Q55FP1 General transcription factor IIH subunit 1

6.1e-22

29.46

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Query:  LSKSEMELRMRCLQEDSELQKLHKQFV-IGGVLTESEFWAARKKLLERDSSKKSKQLIGFKSSMVLDTKPMSDGRTNKVTFNLTPEIKYQIFALKPAVHQ
        LS+ +++ R+  LQ + EL++L++Q V    V++ES+FW +RK +L+ DS++  KQ  G  S+++ D +P S+   N V +  TP + +QIF   P+V +
Subjt:  LSKSEMELRMRCLQEDSELQKLHKQFV-IGGVLTESEFWAARKKLLERDSSKKSKQLIGFKSSMVLDTKPMSDGRTNKVTFNLTPEIKYQIFALKPAVHQ

Query:  AFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDEILAAETRKKIRHVDPTLDLEADLGDDYTHLPDHGIFRDGGKEITESQN
        A+  +VP K+SE++FW KY +++Y +  ++S  A A   +D+  + +  D++      ++K+  ++P +DL +  G D      +G+  D  ++  + + 
Subjt:  AFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDEILAAETRKKIRHVDPTLDLEADLGDDYTHLPDHGIFRDGGKEITESQN

Query:  EHYKRTLSQDLNRQGAVVLEGRTI
              L +  NR  A+VL  + +
Subjt:  EHYKRTLSQDLNRQGAVVLEGRTI

Q9DBA9 General transcription factor IIH subunit 1

1.2e-17

29.33

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Query:  IKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALAKSGEAAQAAPSERPVAAFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVIG
        IK  K + EG  K   L L    G +  F F N S     R+ V   L       Q  P          ++ +  E+E + R LQED  L +L+K  V+ 
Subjt:  IKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALAKSGEAAQAAPSERPVAAFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVIG

Query:  GVLTESEFWAARKKLLERDSSKKS-KQLIGFKSSMVLDTKPMSDGRTNKVTFNLTPEIKYQIFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTK
         V++  EFWA R  +   DSS  S KQ +G  ++ + D +P +DG  N + +NLT +I   IF   PAV   +   VP+ M+EK+FWT++F++ Y H  +
Subjt:  GVLTESEFWAARKKLLERDSSKKS-KQLIGFKSSMVLDTKPMSDGRTNKVTFNLTPEIKYQIFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTK

Query:  NSIAAA---AEAAEDEELALFLKDDEILAAETRKKIRHVDPTLDLEA------DLGDDYTHLP----DHGIFRDGGKEITESQNEHYKRTLSQDLNRQGA
         +  +    AE A+ +E  L          +T   +   +P LDL +      D G   + +P       I  +    I +  N H    L+  L +Q A
Subjt:  NSIAAA---AEAAEDEELALFLKDDEILAAETRKKIRHVDPTLDLEA------DLGDDYTHLP----DHGIFRDGGKEITESQNEHYKRTLSQDLNRQGA

Q9M322 General transcription and DNA repair factor IIH subunit TFB1-3

1.6e-152

48.86

Show/hide

Query:  VHKSAKYKTSVKDPGMPGVLEMTERKFVFRPSDPTSASKLDVEFRFIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALAKSGEA
        + K  KYK+ VKDPG  G LE++E   +F P+DP S  KL V+   IK  K TKEGSNKPPWLNLT  QG S+IFEF+N+ D+H CR+F+  ALAK  E 
Subjt:  VHKSAKYKTSVKDPGMPGVLEMTERKFVFRPSDPTSASKLDVEFRFIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALAKSGEA

Query:  AQAAPSERPVAAFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERDSSKKSKQLIGFKSSMVLDTKPMSDGRTNKVTFNLT
               + V   P EQLS +E ELR + L+E+SELQKLHKQFV   VLTE EFW+ RKKLL +DS +KSKQ +G KS MV   KP +DGRTN+VTFNLT
Subjt:  AQAAPSERPVAAFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERDSSKKSKQLIGFKSSMVLDTKPMSDGRTNKVTFNLT

Query:  PEIKYQIFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDEILAAETRKKIRHVDPTLDLEADLGDDYTHLPD
         EI +QIFA KPAV QAF+N+VP KM+EKDFWTKYFRAEYL+STKN+  AAAEAAEDEELA+FLK DEILA E R+K+R VDPTLD++AD GDDYTHL D
Subjt:  PEIKYQIFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDEILAAETRKKIRHVDPTLDLEADLGDDYTHLPD

Query:  HGIFRDGGKEITESQNEHYKRTLSQDLNRQGAVVLEGRTIDIDLDDPRTVAEALVRSRHA------VEGNEKQTALDRISRMTAIEDLQAPHSHPFAPLC
        HGI RDG  +I E QN+  KR+L QDLNR  AVVLEGR I++  +D R VAEAL R++        +  +  Q  L+R+SR T +EDLQAP + P APL 
Subjt:  HGIFRDGGKEITESQNEHYKRTLSQDLNRQGAVVLEGRTIDIDLDDPRTVAEALVRSRHA------VEGNEKQTALDRISRMTAIEDLQAPHSHPFAPLC

Query:  IKDPRDYFDAQQANAIKTLDDTRAGMQQTKCSLGTTEAYCSLRESISEIKSSGLKLPIIKPEVALMVKAPAAFSCQKHAFLLCIDNSSSATKLLILLLLN
        IKDPRDYF++QQ N +      +A  +         EAY  L+ESI  I+ +GL  P+IKPEV+  V            F       S+A  +L      
Subjt:  IKDPRDYFDAQQANAIKTLDDTRAGMQQTKCSLGTTEAYCSLRESISEIKSSGLKLPIIKPEVALMVKAPAAFSCQKHAFLLCIDNSSSATKLLILLLLN

Query:  EGSGPLIDVKDTILAS---RGIRQWNTNNVEVGGRNTLLDFDTGMVGARLGCRISMRTDGLPCLIIRGCQLILYDSYWAYAAFLYGSPVLLLLVGMLFAT
         G  P     D +  S     I  W +                                      I+      + SY     +L              +T
Subjt:  EGSGPLIDVKDTILAS---RGIRQWNTNNVEVGGRNTLLDFDTGMVGARLGCRISMRTDGLPCLIIRGCQLILYDSYWAYAAFLYGSPVLLLLVGMLFAT

Query:  QVSRLKDAMSKIYRQLEEIKETVLADFRHQVSLLVRPMHQALDAAFQHHDADLQKRSVK
        +V +LKDAMS  Y  L+ +K++V +D RHQVSLLVRPM QALDAAFQH+++DLQ+R+ K
Subjt:  QVSRLKDAMSKIYRQLEEIKETVLADFRHQVSLLVRPMHQALDAAFQHHDADLQKRSVK

Arabidopsis top hits

e value

%identity

Alignment

AT1G55750.1 BSD domain (BTF2-like transcription factors, Synapse-associated proteins and DOS2-like proteins)

5.2e-162

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Query:  VHKSAKYKTSVKDPGMPGVLEMTERKFVFRPSDPTSASKLDVEFRFIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALAKSGEA
        + K  KYK++VKDPG PG L + E   +F P+DP S SKL V  + IK  K TKEGSNKPPWLNLT  Q  S+IFEF+N+ D+H CR+F+  ALAK    
Subjt:  VHKSAKYKTSVKDPGMPGVLEMTERKFVFRPSDPTSASKLDVEFRFIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALAKSGEA

Query:  AQAAPSERPVAAFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERDSSKKSKQLIGFKSSMVLDTKPMSDGRTNKVTFNLT
         +  P+ + V +   EQLS  E+ELR + L+E+SELQ+LHKQFV   VLTE EFWA RKKLL +DS +KSKQ +G KS MV   KP +DGRTN+VTFNLT
Subjt:  AQAAPSERPVAAFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERDSSKKSKQLIGFKSSMVLDTKPMSDGRTNKVTFNLT

Query:  PEIKYQIFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDEILAAETRKKIRHVDPTLDLEADLGDDYTHLPD
        PEI +QIFA KPAV QAF+N+VP+KM+EKDFWTKYFRAEYL+STKN+  AAAEAAEDEELA+FLK DEILA ETR KIR VDPTLD+EAD GDDYTHL D
Subjt:  PEIKYQIFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDEILAAETRKKIRHVDPTLDLEADLGDDYTHLPD

Query:  HGIFRDGGKEITESQNEHYKRTLSQDLNRQGAVVLEGRTIDIDLDDPRTVAEALVRSRHAVEG------NEKQTALDRISRMTAIEDLQAPHSHPFAPLC
        HGI RDG  ++ E QN+ +KR+L QDLNR  AVVLEGR+ID++ +D R VAEAL R +   +       +  Q  L+R+SR+  +EDLQAP + P APL 
Subjt:  HGIFRDGGKEITESQNEHYKRTLSQDLNRQGAVVLEGRTIDIDLDDPRTVAEALVRSRHAVEG------NEKQTALDRISRMTAIEDLQAPHSHPFAPLC

Query:  IKDPRDYFDAQQANAIKTLDDTRAGMQQTKCSLGTTEAYCSLRESISEIKSSGLKLPIIKPEVALMVKAPAAFSCQKHAFLLCIDNSSSATKLLILLLLN
        IKDPRDYF++QQ N +      + G+++        EAY  L+ESI EI+++GL  P+IKPEV+  V                    SS T+ +      
Subjt:  IKDPRDYFDAQQANAIKTLDDTRAGMQQTKCSLGTTEAYCSLRESISEIKSSGLKLPIIKPEVALMVKAPAAFSCQKHAFLLCIDNSSSATKLLILLLLN

Query:  EGSGPLIDVKDTILASRGIRQWNTNNVEVGGRNTLLDFDTGMVGARLGCRISMRTDGLPCLIIRGCQLILYDSYWAYAAFLYGSPVLLLLVGMLFATQVS
         G  P     D +  S               ++ +L   T                      I+      + SY     +L+              T+V 
Subjt:  EGSGPLIDVKDTILASRGIRQWNTNNVEVGGRNTLLDFDTGMVGARLGCRISMRTDGLPCLIIRGCQLILYDSYWAYAAFLYGSPVLLLLVGMLFATQVS

Query:  RLKDAMSKIYRQLEEIKETVLADFRHQVSLLVRPMHQALDAAFQHHDADLQKRSVKGGERPNGY
        +LKDAMS  Y +LE +KE+V +D RHQVSLLVRPM QALDAAF H++ DLQ+R+ K GERPNGY
Subjt:  RLKDAMSKIYRQLEEIKETVLADFRHQVSLLVRPMHQALDAAFQHHDADLQKRSVKGGERPNGY

AT3G61420.1 BSD domain (BTF2-like transcription factors, Synapse-associated proteins and DOS2-like proteins)

1.2e-153

48.86

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Query:  VHKSAKYKTSVKDPGMPGVLEMTERKFVFRPSDPTSASKLDVEFRFIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALAKSGEA
        + K  KYK+ VKDPG  G LE++E   +F P+DP S  KL V+   IK  K TKEGSNKPPWLNLT  QG S+IFEF+N+ D+H CR+F+  ALAK  E 
Subjt:  VHKSAKYKTSVKDPGMPGVLEMTERKFVFRPSDPTSASKLDVEFRFIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALAKSGEA

Query:  AQAAPSERPVAAFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERDSSKKSKQLIGFKSSMVLDTKPMSDGRTNKVTFNLT
               + V   P EQLS +E ELR + L+E+SELQKLHKQFV   VLTE EFW+ RKKLL +DS +KSKQ +G KS MV   KP +DGRTN+VTFNLT
Subjt:  AQAAPSERPVAAFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERDSSKKSKQLIGFKSSMVLDTKPMSDGRTNKVTFNLT

Query:  PEIKYQIFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDEILAAETRKKIRHVDPTLDLEADLGDDYTHLPD
         EI +QIFA KPAV QAF+N+VP KM+EKDFWTKYFRAEYL+STKN+  AAAEAAEDEELA+FLK DEILA E R+K+R VDPTLD++AD GDDYTHL D
Subjt:  PEIKYQIFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDEILAAETRKKIRHVDPTLDLEADLGDDYTHLPD

Query:  HGIFRDGGKEITESQNEHYKRTLSQDLNRQGAVVLEGRTIDIDLDDPRTVAEALVRSRHA------VEGNEKQTALDRISRMTAIEDLQAPHSHPFAPLC
        HGI RDG  +I E QN+  KR+L QDLNR  AVVLEGR I++  +D R VAEAL R++        +  +  Q  L+R+SR T +EDLQAP + P APL 
Subjt:  HGIFRDGGKEITESQNEHYKRTLSQDLNRQGAVVLEGRTIDIDLDDPRTVAEALVRSRHA------VEGNEKQTALDRISRMTAIEDLQAPHSHPFAPLC

Query:  IKDPRDYFDAQQANAIKTLDDTRAGMQQTKCSLGTTEAYCSLRESISEIKSSGLKLPIIKPEVALMVKAPAAFSCQKHAFLLCIDNSSSATKLLILLLLN
        IKDPRDYF++QQ N +      +A  +         EAY  L+ESI  I+ +GL  P+IKPEV+  V            F       S+A  +L      
Subjt:  IKDPRDYFDAQQANAIKTLDDTRAGMQQTKCSLGTTEAYCSLRESISEIKSSGLKLPIIKPEVALMVKAPAAFSCQKHAFLLCIDNSSSATKLLILLLLN

Query:  EGSGPLIDVKDTILAS---RGIRQWNTNNVEVGGRNTLLDFDTGMVGARLGCRISMRTDGLPCLIIRGCQLILYDSYWAYAAFLYGSPVLLLLVGMLFAT
         G  P     D +  S     I  W +                                      I+      + SY     +L              +T
Subjt:  EGSGPLIDVKDTILAS---RGIRQWNTNNVEVGGRNTLLDFDTGMVGARLGCRISMRTDGLPCLIIRGCQLILYDSYWAYAAFLYGSPVLLLLVGMLFAT

Query:  QVSRLKDAMSKIYRQLEEIKETVLADFRHQVSLLVRPMHQALDAAFQHHDADLQKRSVK
        +V +LKDAMS  Y  L+ +K++V +D RHQVSLLVRPM QALDAAFQH+++DLQ+R+ K
Subjt:  QVSRLKDAMSKIYRQLEEIKETVLADFRHQVSLLVRPMHQALDAAFQHHDADLQKRSVK

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGGAACCAAGTATGTCCATAAGAGTGCCAAGTACAAGACCTCAGTTAAGGATCCTGGCATGCCTGGCGTTTTGGAAATGACAGAGCGCAAGTTTGTATTTAGACCCAG
TGATCCCACTTCAGCTTCTAAGCTTGATGTAGAGTTTAGATTTATTAAAGGCCACAAAAACACTAAGGAAGGATCAAATAAACCACCGTGGCTTAATCTCACCAGGGACC
AGGGTGGAAGTTACATTTTTGAGTTCAAAAATTTCTCCGATCTTCATGTTTGCCGCGAGTTTGTAGGAAGTGCTTTAGCAAAGTCAGGAGAGGCTGCACAAGCTGCTCCC
TCTGAGAGGCCTGTGGCGGCATTTCCTCATGAACAACTCAGTAAATCAGAAATGGAACTTCGGATGAGATGTTTGCAAGAGGATAGTGAACTGCAAAAACTCCATAAACA
ATTTGTGATTGGTGGTGTGTTGACAGAATCTGAATTTTGGGCAGCAAGGAAGAAATTACTGGAACGAGACAGCTCCAAAAAATCAAAACAACTGATTGGTTTTAAGAGTT
CAATGGTTTTGGATACCAAACCAATGTCTGATGGTCGGACAAACAAGGTTACATTTAATTTGACACCGGAGATCAAATATCAGATTTTTGCTCTGAAACCAGCTGTTCAC
CAGGCCTTCCTTAATCATGTTCCCAATAAGATGTCAGAGAAAGACTTTTGGACAAAATATTTTAGAGCGGAGTACCTTCATAGTACCAAAAATTCTATTGCAGCTGCAGC
AGAGGCTGCTGAAGACGAAGAACTTGCCCTTTTTCTGAAGGATGACGAGATATTGGCTGCTGAAACTCGGAAAAAGATTCGGCATGTTGATCCTACATTGGATTTGGAAG
CGGATCTAGGAGATGATTACACACACCTTCCAGATCATGGAATCTTTCGTGATGGTGGCAAGGAGATAACTGAATCACAAAATGAGCACTATAAAAGGACTTTGTCACAA
GACCTTAATCGTCAAGGTGCAGTTGTTCTTGAAGGCAGAACTATAGACATAGACTTGGATGATCCAAGGACAGTAGCAGAAGCACTTGTGCGGTCTAGACATGCGGTAGA
AGGAAATGAGAAGCAGACAGCACTTGATAGGATCTCTAGGATGACAGCGATTGAGGATCTTCAAGCACCTCATAGCCATCCTTTTGCTCCTCTTTGTATCAAGGATCCTC
GAGATTATTTTGATGCTCAACAAGCAAATGCCATCAAGACATTGGATGATACACGAGCAGGAATGCAACAAACTAAATGCAGTTTGGGTACTACAGAAGCATATTGCTCA
CTGAGGGAATCCATATCTGAGATCAAATCTTCCGGATTGAAGCTTCCCATAATTAAACCTGAAGTTGCTCTTATGGTAAAAGCACCTGCAGCATTCTCTTGCCAAAAACA
CGCATTTCTGCTATGTATTGACAACTCTTCTTCTGCTACCAAACTTCTAATTCTTCTTTTGCTCAATGAAGGCTCGGGTCCTTTAATAGATGTTAAGGATACAATTCTTG
CTTCTAGAGGCATAAGGCAATGGAATACGAATAATGTTGAAGTTGGGGGTCGGAACACCCTCTTAGATTTCGATACTGGAATGGTTGGTGCACGATTAGGATGTAGAATA
TCCATGAGAACTGATGGGTTGCCTTGCCTCATCATACGAGGGTGTCAACTTATATTATATGATTCATACTGGGCATATGCTGCATTTTTGTATGGATCGCCTGTACTCTT
ATTGCTTGTTGGTATGTTATTTGCTACGCAGGTGAGCAGATTGAAGGATGCCATGTCAAAAATATATCGACAGTTAGAGGAGATTAAGGAAACCGTGCTAGCGGATTTCC
GCCACCAAGTATCTCTTTTGGTTCGTCCAATGCATCAGGCTCTGGATGCTGCATTTCAGCATCATGACGCTGATTTGCAGAAGAGATCAGTAAAGGGTGGAGAAAGGCCT
AACGGATACACTTAG

mRNA sequence

Show/hide mRNA sequence

GATCGGGAGAAATCCAGAGAGAGAAGAGAAAAAGAGGGAAAATAAAAGAAGAAAGAAAGGAGTGAAATAGATGGAAAAAGAAAGGGAAGCGTAGAGAGAAAAGGCCGTGG
AGAATGGCGGCGACAAAGAGGATTGGCTGAACGACCTATAGAAGCAAGAATCAGAAAAAGGGAGCTTGCAGAATCATTGATTAAGATCGTGGACCGATTGTCTCTGAGGG
GGAGATGGGAACCAAGTATGTCCATAAGAGTGCCAAGTACAAGACCTCAGTTAAGGATCCTGGCATGCCTGGCGTTTTGGAAATGACAGAGCGCAAGTTTGTATTTAGAC
CCAGTGATCCCACTTCAGCTTCTAAGCTTGATGTAGAGTTTAGATTTATTAAAGGCCACAAAAACACTAAGGAAGGATCAAATAAACCACCGTGGCTTAATCTCACCAGG
GACCAGGGTGGAAGTTACATTTTTGAGTTCAAAAATTTCTCCGATCTTCATGTTTGCCGCGAGTTTGTAGGAAGTGCTTTAGCAAAGTCAGGAGAGGCTGCACAAGCTGC
TCCCTCTGAGAGGCCTGTGGCGGCATTTCCTCATGAACAACTCAGTAAATCAGAAATGGAACTTCGGATGAGATGTTTGCAAGAGGATAGTGAACTGCAAAAACTCCATA
AACAATTTGTGATTGGTGGTGTGTTGACAGAATCTGAATTTTGGGCAGCAAGGAAGAAATTACTGGAACGAGACAGCTCCAAAAAATCAAAACAACTGATTGGTTTTAAG
AGTTCAATGGTTTTGGATACCAAACCAATGTCTGATGGTCGGACAAACAAGGTTACATTTAATTTGACACCGGAGATCAAATATCAGATTTTTGCTCTGAAACCAGCTGT
TCACCAGGCCTTCCTTAATCATGTTCCCAATAAGATGTCAGAGAAAGACTTTTGGACAAAATATTTTAGAGCGGAGTACCTTCATAGTACCAAAAATTCTATTGCAGCTG
CAGCAGAGGCTGCTGAAGACGAAGAACTTGCCCTTTTTCTGAAGGATGACGAGATATTGGCTGCTGAAACTCGGAAAAAGATTCGGCATGTTGATCCTACATTGGATTTG
GAAGCGGATCTAGGAGATGATTACACACACCTTCCAGATCATGGAATCTTTCGTGATGGTGGCAAGGAGATAACTGAATCACAAAATGAGCACTATAAAAGGACTTTGTC
ACAAGACCTTAATCGTCAAGGTGCAGTTGTTCTTGAAGGCAGAACTATAGACATAGACTTGGATGATCCAAGGACAGTAGCAGAAGCACTTGTGCGGTCTAGACATGCGG
TAGAAGGAAATGAGAAGCAGACAGCACTTGATAGGATCTCTAGGATGACAGCGATTGAGGATCTTCAAGCACCTCATAGCCATCCTTTTGCTCCTCTTTGTATCAAGGAT
CCTCGAGATTATTTTGATGCTCAACAAGCAAATGCCATCAAGACATTGGATGATACACGAGCAGGAATGCAACAAACTAAATGCAGTTTGGGTACTACAGAAGCATATTG
CTCACTGAGGGAATCCATATCTGAGATCAAATCTTCCGGATTGAAGCTTCCCATAATTAAACCTGAAGTTGCTCTTATGGTAAAAGCACCTGCAGCATTCTCTTGCCAAA
AACACGCATTTCTGCTATGTATTGACAACTCTTCTTCTGCTACCAAACTTCTAATTCTTCTTTTGCTCAATGAAGGCTCGGGTCCTTTAATAGATGTTAAGGATACAATT
CTTGCTTCTAGAGGCATAAGGCAATGGAATACGAATAATGTTGAAGTTGGGGGTCGGAACACCCTCTTAGATTTCGATACTGGAATGGTTGGTGCACGATTAGGATGTAG
AATATCCATGAGAACTGATGGGTTGCCTTGCCTCATCATACGAGGGTGTCAACTTATATTATATGATTCATACTGGGCATATGCTGCATTTTTGTATGGATCGCCTGTAC
TCTTATTGCTTGTTGGTATGTTATTTGCTACGCAGGTGAGCAGATTGAAGGATGCCATGTCAAAAATATATCGACAGTTAGAGGAGATTAAGGAAACCGTGCTAGCGGAT
TTCCGCCACCAAGTATCTCTTTTGGTTCGTCCAATGCATCAGGCTCTGGATGCTGCATTTCAGCATCATGACGCTGATTTGCAGAAGAGATCAGTAAAGGGTGGAGAAAG
GCCTAACGGATACACTTAGACAATATGAATATAGAACCTCCTCAATTCCCTCAATGAGTTCATCTTCAGATGAAATTTTGCAGTCGACGGCCATCGGCACGTGTTGGACG
AGGCTTTATTCTAGCATTCAGTGTGCCCAATGCCTAATCTATAGTAATTATTTCTCCATATATATAATAAACATTTAGAATTGTATTATTACTTTATATATATAATATGA
GAAGTTACAAAATATTTTATCTTCAGTCACGGCGCCCAAAAACTTGACACTAACTTATTGATCTTATATAGGCAAATGGCGACTAAATTCTGGTGTTGAAATAAAAATTA
AGCAATAAAATAAATCTCACAATTCGATGGGATTTAGACTCCAAGGTGTTATTTCA

Protein sequence

Show/hide protein sequence

MGTKYVHKSAKYKTSVKDPGMPGVLEMTERKFVFRPSDPTSASKLDVEFRFIKGHKNTKEGSNKPPWLNLTRDQGGSYIFEFKNFSDLHVCREFVGSALAKSGEAAQAAP
SERPVAAFPHEQLSKSEMELRMRCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLERDSSKKSKQLIGFKSSMVLDTKPMSDGRTNKVTFNLTPEIKYQIFALKPAVH
QAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDEILAAETRKKIRHVDPTLDLEADLGDDYTHLPDHGIFRDGGKEITESQNEHYKRTLSQ
DLNRQGAVVLEGRTIDIDLDDPRTVAEALVRSRHAVEGNEKQTALDRISRMTAIEDLQAPHSHPFAPLCIKDPRDYFDAQQANAIKTLDDTRAGMQQTKCSLGTTEAYCS
LRESISEIKSSGLKLPIIKPEVALMVKAPAAFSCQKHAFLLCIDNSSSATKLLILLLLNEGSGPLIDVKDTILASRGIRQWNTNNVEVGGRNTLLDFDTGMVGARLGCRI
SMRTDGLPCLIIRGCQLILYDSYWAYAAFLYGSPVLLLLVGMLFATQVSRLKDAMSKIYRQLEEIKETVLADFRHQVSLLVRPMHQALDAAFQHHDADLQKRSVKGGERP
NGYT

CaUC04G070140 (gene) of Watermelon (USVL246-FR2) v1 genome