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CaUC04G070190 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC04G070190
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionDNA repair protein RAD51-like protein 1
Genome locationCiama_Chr04:15785618..15791853
RNA-Seq ExpressionCaUC04G070190
SyntenyCaUC04G070190
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
GO:0006468 - protein phosphorylation (biological process)
GO:0006950 - response to stress (biological process)
GO:0007154 - cell communication (biological process)
GO:0018193 - peptidyl-amino acid modification (biological process)
GO:0051716 - cellular response to stimulus (biological process)
GO:0009523 - photosystem II (cellular component)
GO:0000166 - nucleotide binding (molecular function)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004672 - protein kinase activity (molecular function)
GO:0008233 - peptidase activity (molecular function)
GO:0016491 - oxidoreductase activity (molecular function)
GO:0016853 - isomerase activity (molecular function)
GO:0046914 - transition metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_038874950.1 uncharacterized mitochondrial protein AtMg00710-like [Benincasa hispida]1.7e-0853.23Show/hide
Query:  MFIGDGFTKGVKGYKMWHPTERKFIISRDVTFREEEMYMQKEETSDATKETNTTQIEVEKPK
        MF+  GFT+GVKG+KMW+P E++ +++RDVTF+E EM+MQKE+T+    ++ +T+IEVE  K
Subjt:  MFIGDGFTKGVKGYKMWHPTERKFIISRDVTFREEEMYMQKEETSDATKETNTTQIEVEKPK

XP_038877664.1 uncharacterized mitochondrial protein AtMg00710-like [Benincasa hispida]1.4e-1056.06Show/hide
Query:  ASMAMFIGDGFTKGVKGYKMWHPTERKFIISRDVTFREEEMYMQKEETSDATKETNTTQIEVEKPK
        A   MF+  GFT+GVKG+KMW+  E++F++SRDVTFRE EM+MQKE+T+    +++TT+I+VE PK
Subjt:  ASMAMFIGDGFTKGVKGYKMWHPTERKFIISRDVTFREEEMYMQKEETSDATKETNTTQIEVEKPK

XP_038885954.1 uncharacterized protein LOC120076257 [Benincasa hispida]1.4e-0774.36Show/hide
Query:  MFIGDGFTKGVKGYKMWHPTERKFIISRDVTFREEEMYM
        MF+  GFT+GVKGYKMWHP ERKFI+SRD+TFR EE +M
Subjt:  MFIGDGFTKGVKGYKMWHPTERKFIISRDVTFREEEMYM

XP_038891593.1 uncharacterized protein LOC120080985 [Benincasa hispida]9.5e-1261.54Show/hide
Query:  ASMAMFIGDGFTKGVKGYKMWHPTERKFIISRDVTFREEEMYMQKEETSDATKETNTTQIEVEKP
        A   MF+  GFT+GVKGYKMWHP ERKFIISRD+TFREE+M+M+KE+  +   +++TT I+VE P
Subjt:  ASMAMFIGDGFTKGVKGYKMWHPTERKFIISRDVTFREEEMYMQKEETSDATKETNTTQIEVEKP

XP_038904504.1 uncharacterized protein LOC120090876 [Benincasa hispida]7.5e-0957.14Show/hide
Query:  MFIGDGFTKGVKGYKMWHPTERKFIISRDVTFREEEMYMQKEETS-DATKETNTTQIEVEKPK
        MF+  GF++GVKG+KMW+P E++FI+S+DVTFRE+EM+MQKE+T+ +  K   T +IEVE  K
Subjt:  MFIGDGFTKGVKGYKMWHPTERKFIISRDVTFREEEMYMQKEETS-DATKETNTTQIEVEKPK

TrEMBL top hitse value%identityAlignment
A0A6A2Y4D7 Photosystem II reaction center Psb28 protein6.4e-0654.55Show/hide
Query:  GFTKGVKGYKMWHPTERKFIISRDVTFREEEMYMQKEETSDATKETNTTQIEVEK
        G+  GVKGY++W PT RK IISRDV F E++  +Q++E  D+T+++ TTQI VEK
Subjt:  GFTKGVKGYKMWHPTERKFIISRDVTFREEEMYMQKEETSDATKETNTTQIEVEK

A0A6A2YJE9 Retrovirus-related Pol polyprotein from transposon TNT 1-946.4e-0654.55Show/hide
Query:  GFTKGVKGYKMWHPTERKFIISRDVTFREEEMYMQKEETSDATKETNTTQIEVEK
        G+T GVKGY++W PT RK IISRDV F E++  +Q++E  D+ +++ TTQI VEK
Subjt:  GFTKGVKGYKMWHPTERKFIISRDVTFREEEMYMQKEETSDATKETNTTQIEVEK

A0A6A2Z680 Methyl esterase 171.1e-0554.55Show/hide
Query:  GFTKGVKGYKMWHPTERKFIISRDVTFREEEMYMQKEETSDATKETNTTQIEVEK
        G+  GVKGY++W PT RK IISRDV F E++  +Q++E +D T+++ TTQI VEK
Subjt:  GFTKGVKGYKMWHPTERKFIISRDVTFREEEMYMQKEETSDATKETNTTQIEVEK

A0A6A3AJS1 Uncharacterized protein6.4e-0654.55Show/hide
Query:  GFTKGVKGYKMWHPTERKFIISRDVTFREEEMYMQKEETSDATKETNTTQIEVEK
        G+  GVKGY++W PT RK IISRDV F E++  +Q++E  D+T+++ TTQI VEK
Subjt:  GFTKGVKGYKMWHPTERKFIISRDVTFREEEMYMQKEETSDATKETNTTQIEVEK

A0A6A3CSP3 Uncharacterized protein6.4e-0654.55Show/hide
Query:  GFTKGVKGYKMWHPTERKFIISRDVTFREEEMYMQKEETSDATKETNTTQIEVEK
        G+T GVKGY++W PT RK IISRDV F E++  +Q++E  D+ +++ TTQI VEK
Subjt:  GFTKGVKGYKMWHPTERKFIISRDVTFREEEMYMQKEETSDATKETNTTQIEVEK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTACAATTCTAAACAAGGGGCTTCCAGTATTAGGAGAAATTTCTCGAAAGGCCATGGATCCCATTTTAGCTTCCAAGTACGATCGAGCACTTGAAAATGTCTTTTT
GATGGCATCCATGGCAATGTTCATTGGAGATGGCTTCACTAAAGGAGTAAAGGGATACAAAATGTGGCACCCTACTGAACGGAAGTTCATAATAAGTAGAGATGTAACTT
TCAGAGAGGAAGAGATGTATATGCAAAAGGAGGAAACCTCAGATGCAACTAAAGAGACCAACACTACTCAAATTGAGGTGGAGAAGCCTAAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTACAATTCTAAACAAGGGGCTTCCAGTATTAGGAGAAATTTCTCGAAAGGCCATGGATCCCATTTTAGCTTCCAAGTACGATCGAGCACTTGAAAATGTCTTTTT
GATGGCATCCATGGCAATGTTCATTGGAGATGGCTTCACTAAAGGAGTAAAGGGATACAAAATGTGGCACCCTACTGAACGGAAGTTCATAATAAGTAGAGATGTAACTT
TCAGAGAGGAAGAGATGTATATGCAAAAGGAGGAAACCTCAGATGCAACTAAAGAGACCAACACTACTCAAATTGAGGTGGAGAAGCCTAAA
Protein sequenceShow/hide protein sequence
MATILNKGLPVLGEISRKAMDPILASKYDRALENVFLMASMAMFIGDGFTKGVKGYKMWHPTERKFIISRDVTFREEEMYMQKEETSDATKETNTTQIEVEKPK