; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CaUC04G070300 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC04G070300
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionDUF4283 domain-containing protein
Genome locationCiama_Chr04:16029860..16030459
RNA-Seq ExpressionCaUC04G070300
SyntenyCaUC04G070300
Gene Ontology termsGO:0110165 - cellular anatomical structure (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060724.1 hypothetical protein E6C27_scaffold72G00110 [Cucumis melo var. makuwa]1.0e-0640.85Show/hide
Query:  MEVAGDFEMPSSMIVRIRGKDSIVPVTYDWKPEKCVKCNSFGHGGGQCSR-------QDEVLEVALTTKGN
        +++ GD  MP+ + V +RG D IV + Y+WKP KC  C  FGH GG+C R       Q+EV+     +KG+
Subjt:  MEVAGDFEMPSSMIVRIRGKDSIVPVTYDWKPEKCVKCNSFGHGGGQCSR-------QDEVLEVALTTKGN

KAA0062888.1 non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuwa]1.7e-0629.85Show/hide
Query:  MEVAGDFEMPSSMIVRIRGKDSIVPVTYDWKPEKCVKCNSFGHGGGQCSR-------QDEVLEVALTTKGNKVGTGVMALGVGNLVKEDDFIPVSRCKRD
        +++ G+F M + + V +RG D  V V Y+WKP+KC  C + GH GG+C R       Q+EV+   +  KG  V +   A  V    K+ +   +      
Subjt:  MEVAGDFEMPSSMIVRIRGKDSIVPVTYDWKPEKCVKCNSFGHGGGQCSR-------QDEVLEVALTTKGNKVGTGVMALGVGNLVKEDDFIPVSRCKRD

Query:  MGRKISLQEAEDDSLVLALVDSGPSSLLVVGDLG
         G  +  +  + D     LV    S L+ V D G
Subjt:  MGRKISLQEAEDDSLVLALVDSGPSSLLVVGDLG

TYK01660.1 DUF4283 domain-containing protein [Cucumis melo var. makuwa]2.0e-0734.15Show/hide
Query:  DFEMPSSMIVRIRGKDSIVPVTYDWKPEKCVKCNSFGHGGGQCSR--QDEVLEVALTTKGNKVGTGVMALGVGNLVKEDDFIPVSRCKRDMGRKISLQEA
        D  MP  +   +RG D I+PV Y WKP KC  C +FGH  G+C R  + ++ E  +    N+    V       + K D+FI V+  KR++   +S+++ 
Subjt:  DFEMPSSMIVRIRGKDSIVPVTYDWKPEKCVKCNSFGHGGGQCSR--QDEVLEVALTTKGNKVGTGVMALGVGNLVKEDDFIPVSRCKRDMGRKISLQEA

Query:  EDDSLVLALVDSGPSSLLVVGDL
           SL + + +S   SLL VGD+
Subjt:  EDDSLVLALVDSGPSSLLVVGDL

TYK26656.1 DUF4283 domain-containing protein [Cucumis melo var. makuwa]2.9e-0639.71Show/hide
Query:  MEVAGDFEMPSSMIVRIRGKDSIVPVTYDWKPEKCVKCNSFGHGGGQCSRQDE--VLEVALTTKGNKV
        +E+ G   MPS + V +RG +  V V Y+WKP KC  C +FGH   +CSR +E   ++  +  KG+ V
Subjt:  MEVAGDFEMPSSMIVRIRGKDSIVPVTYDWKPEKCVKCNSFGHGGGQCSRQDE--VLEVALTTKGNKV

XP_038876497.1 uncharacterized protein LOC120068928 [Benincasa hispida]2.2e-0645.1Show/hide
Query:  MEVAGDFEMPSSMIVRIRGKDSIVPVTYDWKPEKCVKCNSFGHGGGQCSRQ
        ++V  D   PS++ VR++G++ I+PV Y+WKP +C  C SFGH G  C +Q
Subjt:  MEVAGDFEMPSSMIVRIRGKDSIVPVTYDWKPEKCVKCNSFGHGGGQCSRQ

TrEMBL top hitse value%identityAlignment
A0A5A7TWG5 Reverse transcriptase domain-containing protein1.8e-0628.36Show/hide
Query:  MEVAGDFEMPSSMIVRIRGKDSIVPVTYDWKPEKCVKCNSFGHGGGQCSR--QDEVLEVALTTKGNKVGTGVMALGVGNLVKEDDFIPVSRCKRDMGRKI
        +E+     MP+ + V +RG D  V V Y+WKP KC  C +FGH G  CSR  + + ++  +  KG+ V +      V    K+ +   +         ++
Subjt:  MEVAGDFEMPSSMIVRIRGKDSIVPVTYDWKPEKCVKCNSFGHGGGQCSR--QDEVLEVALTTKGNKVGTGVMALGVGNLVKEDDFIPVSRCKRDMGRKI

Query:  SLQEAEDDSLVLALVDSGPSSLLVVGDLGDQGGP
             + D     LV    S L+ V D G +G P
Subjt:  SLQEAEDDSLVLALVDSGPSSLLVVGDLGDQGGP

A0A5A7V084 Exo_endo_phos domain-containing protein/DUF4283 domain-containing protein4.8e-0740.85Show/hide
Query:  MEVAGDFEMPSSMIVRIRGKDSIVPVTYDWKPEKCVKCNSFGHGGGQCSR-------QDEVLEVALTTKGN
        +++ GD  MP+ + V +RG D IV + Y+WKP KC  C  FGH GG+C R       Q+EV+     +KG+
Subjt:  MEVAGDFEMPSSMIVRIRGKDSIVPVTYDWKPEKCVKCNSFGHGGGQCSR-------QDEVLEVALTTKGN

A0A5A7V5J2 Non-LTR retroelement reverse transcriptase-like protein8.2e-0729.85Show/hide
Query:  MEVAGDFEMPSSMIVRIRGKDSIVPVTYDWKPEKCVKCNSFGHGGGQCSR-------QDEVLEVALTTKGNKVGTGVMALGVGNLVKEDDFIPVSRCKRD
        +++ G+F M + + V +RG D  V V Y+WKP+KC  C + GH GG+C R       Q+EV+   +  KG  V +   A  V    K+ +   +      
Subjt:  MEVAGDFEMPSSMIVRIRGKDSIVPVTYDWKPEKCVKCNSFGHGGGQCSR-------QDEVLEVALTTKGNKVGTGVMALGVGNLVKEDDFIPVSRCKRD

Query:  MGRKISLQEAEDDSLVLALVDSGPSSLLVVGDLG
         G  +  +  + D     LV    S L+ V D G
Subjt:  MGRKISLQEAEDDSLVLALVDSGPSSLLVVGDLG

A0A5D3BRD2 DUF4283 domain-containing protein9.7e-0834.15Show/hide
Query:  DFEMPSSMIVRIRGKDSIVPVTYDWKPEKCVKCNSFGHGGGQCSR--QDEVLEVALTTKGNKVGTGVMALGVGNLVKEDDFIPVSRCKRDMGRKISLQEA
        D  MP  +   +RG D I+PV Y WKP KC  C +FGH  G+C R  + ++ E  +    N+    V       + K D+FI V+  KR++   +S+++ 
Subjt:  DFEMPSSMIVRIRGKDSIVPVTYDWKPEKCVKCNSFGHGGGQCSR--QDEVLEVALTTKGNKVGTGVMALGVGNLVKEDDFIPVSRCKRDMGRKISLQEA

Query:  EDDSLVLALVDSGPSSLLVVGDL
           SL + + +S   SLL VGD+
Subjt:  EDDSLVLALVDSGPSSLLVVGDL

A0A5D3DSG9 DUF4283 domain-containing protein1.4e-0639.71Show/hide
Query:  MEVAGDFEMPSSMIVRIRGKDSIVPVTYDWKPEKCVKCNSFGHGGGQCSRQDE--VLEVALTTKGNKV
        +E+ G   MPS + V +RG +  V V Y+WKP KC  C +FGH   +CSR +E   ++  +  KG+ V
Subjt:  MEVAGDFEMPSSMIVRIRGKDSIVPVTYDWKPEKCVKCNSFGHGGGQCSRQDE--VLEVALTTKGNKV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGTTGCTGGTGATTTTGAGATGCCCTCTTCTATGATAGTGAGGATTAGGGGCAAAGATTCTATTGTTCCGGTTACTTATGATTGGAAGCCTGAAAAATGTGTGAA
GTGTAATTCTTTTGGGCATGGAGGTGGGCAATGTAGTAGGCAGGATGAAGTGTTGGAGGTGGCTCTAACTACTAAGGGGAATAAGGTGGGGACAGGAGTTATGGCTCTGG
GTGTTGGTAACCTTGTTAAGGAGGATGACTTCATTCCTGTGTCGAGGTGTAAGAGGGATATGGGGAGGAAGATCAGTCTACAAGAGGCGGAGGATGATTCCTTGGTGTTG
GCTTTAGTTGATTCAGGCCCCTCTTCGTTGTTGGTGGTTGGTGACTTGGGTGATCAAGGAGGTCCTTTGGGTGAGTTTGTTGTGGTCTGGTGGGATAGTTTGTCTCATGA
TTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGGTTGCTGGTGATTTTGAGATGCCCTCTTCTATGATAGTGAGGATTAGGGGCAAAGATTCTATTGTTCCGGTTACTTATGATTGGAAGCCTGAAAAATGTGTGAA
GTGTAATTCTTTTGGGCATGGAGGTGGGCAATGTAGTAGGCAGGATGAAGTGTTGGAGGTGGCTCTAACTACTAAGGGGAATAAGGTGGGGACAGGAGTTATGGCTCTGG
GTGTTGGTAACCTTGTTAAGGAGGATGACTTCATTCCTGTGTCGAGGTGTAAGAGGGATATGGGGAGGAAGATCAGTCTACAAGAGGCGGAGGATGATTCCTTGGTGTTG
GCTTTAGTTGATTCAGGCCCCTCTTCGTTGTTGGTGGTTGGTGACTTGGGTGATCAAGGAGGTCCTTTGGGTGAGTTTGTTGTGGTCTGGTGGGATAGTTTGTCTCATGA
TTAG
Protein sequenceShow/hide protein sequence
MEVAGDFEMPSSMIVRIRGKDSIVPVTYDWKPEKCVKCNSFGHGGGQCSRQDEVLEVALTTKGNKVGTGVMALGVGNLVKEDDFIPVSRCKRDMGRKISLQEAEDDSLVL
ALVDSGPSSLLVVGDLGDQGGPLGEFVVVWWDSLSHD