; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CaUC04G070810 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC04G070810
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
Descriptionexosome complex component RRP4 homolog
Genome locationCiama_Chr04:18283022..18288848
RNA-Seq ExpressionCaUC04G070810
SyntenyCaUC04G070810
Gene Ontology termsGO:0000178 - exosome (RNase complex) (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR004088 - K Homology domain, type 1
IPR012340 - Nucleic acid-binding, OB-fold
IPR022967 - RNA-binding domain, S1
IPR026699 - Exosome complex RNA-binding protein 1/RRP40/RRP4
IPR036612 - K Homology domain, type 1 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6606437.1 Exosome complex component RRP4-like protein, partial [Cucurbita argyrosperma subsp. sororia]6.6e-16891.74Show/hide
Query:  MRGLQISLNHTQKIRLQRARERLESLSSKANSDASVIVADTIPLNYEDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDIVVGRVT
        MRGLQ+SLN TQKIRLQRA E LES+SSKANSDASV+VADTIPLNYEDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDI+VGRVT
Subjt:  MRGLQISLNHTQKIRLQRARERLESLSSKANSDASVIVADTIPLNYEDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDIVVGRVT

Query:  EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQMLTVSPYLVKRRKQHFHHLE
        EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMR+IFEENDVICAEVRG QHDGLHLQARSQKYGKLERGQ+LTVSPYLVKRRKQHFHHLE
Subjt:  EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQMLTVSPYLVKRRKQHFHHLE

Query:  QYGIDLILGCNGFIWIGEHVDPKEDMMIEDQVNISEQKGSKFEGTFGNQVQERVYTPLTTRQNICRTANAIRVLSILGFIITVEVVMEIVSLSISMNIDV
        QYGIDLILGCNGFIWIGEHVDP EDMM+ED +N SEQKGSKFEG+FGNQVQER+YTPL TRQNICRTANAIRVLSILGFI++VEV+ME VSLSIS+NIDV
Subjt:  QYGIDLILGCNGFIWIGEHVDPKEDMMIEDQVNISEQKGSKFEGTFGNQVQERVYTPLTTRQNICRTANAIRVLSILGFIITVEVVMEIVSLSISMNIDV

Query:  HEMLGSEFCILTAEKEVERRSLSKKRG
        HEMLGSEFC+LTAEKE ERR+ SKKRG
Subjt:  HEMLGSEFCILTAEKEVERRSLSKKRG

XP_022995373.1 exosome complex component RRP4 homolog [Cucurbita maxima]5.6e-16791.44Show/hide
Query:  MRGLQISLNHTQKIRLQRARERLESLSSKANSDASVIVADTIPLNYEDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDIVVGRVT
        MRGLQ+SLN TQKIRLQRA E LES+SSKANSDASV+VADTIPLNYEDGVLKGHGTLDL GEVVATICGVVERVNKLIYVRALRARYKPEVGDI+VGRVT
Subjt:  MRGLQISLNHTQKIRLQRARERLESLSSKANSDASVIVADTIPLNYEDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDIVVGRVT

Query:  EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQMLTVSPYLVKRRKQHFHHLE
        EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMR+IFEENDVICAEVRG QHDGLHLQARSQKYGKLERGQ+LTVSPYLVKRRKQHFHHLE
Subjt:  EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQMLTVSPYLVKRRKQHFHHLE

Query:  QYGIDLILGCNGFIWIGEHVDPKEDMMIEDQVNISEQKGSKFEGTFGNQVQERVYTPLTTRQNICRTANAIRVLSILGFIITVEVVMEIVSLSISMNIDV
        QYGIDLILGCNGFIWIGEHVDP EDMM+ED +N SEQKGSKFEG+FGNQVQER+YTPL TRQNICRTANAIRVLSILGFI++VEV+ME VSLSIS+NIDV
Subjt:  QYGIDLILGCNGFIWIGEHVDPKEDMMIEDQVNISEQKGSKFEGTFGNQVQERVYTPLTTRQNICRTANAIRVLSILGFIITVEVVMEIVSLSISMNIDV

Query:  HEMLGSEFCILTAEKEVERRSLSKKRG
        HEMLGSEFC+LTAEKE ERR+ SKKRG
Subjt:  HEMLGSEFCILTAEKEVERRSLSKKRG

XP_023533481.1 exosome complex component RRP4 homolog [Cucurbita pepo subsp. pepo]2.5e-16791.44Show/hide
Query:  MRGLQISLNHTQKIRLQRARERLESLSSKANSDASVIVADTIPLNYEDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDIVVGRVT
        MRGLQ+SLN TQKIRLQRA E LES+SSKANSDASV+VADTIPLNYEDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDI+VGRVT
Subjt:  MRGLQISLNHTQKIRLQRARERLESLSSKANSDASVIVADTIPLNYEDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDIVVGRVT

Query:  EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQMLTVSPYLVKRRKQHFHHLE
        EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMR+IFEENDVICAEVRG QHDGLHLQARSQKYGKLERGQ+LTVSPYLVKRRKQHFHHLE
Subjt:  EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQMLTVSPYLVKRRKQHFHHLE

Query:  QYGIDLILGCNGFIWIGEHVDPKEDMMIEDQVNISEQKGSKFEGTFGNQVQERVYTPLTTRQNICRTANAIRVLSILGFIITVEVVMEIVSLSISMNIDV
        QYGIDLILGCNGFIWIGEHVDP EDMM+ED +N SEQKGSKFEG FGNQVQER+YTPL TRQNICRTANAIRVLSILGFI++VEV+ME VSL IS+NIDV
Subjt:  QYGIDLILGCNGFIWIGEHVDPKEDMMIEDQVNISEQKGSKFEGTFGNQVQERVYTPLTTRQNICRTANAIRVLSILGFIITVEVVMEIVSLSISMNIDV

Query:  HEMLGSEFCILTAEKEVERRSLSKKRG
        HEMLGSEFC+LTAEKE ERR+ SKKRG
Subjt:  HEMLGSEFCILTAEKEVERRSLSKKRG

XP_038882864.1 exosome complex component RRP4 homolog isoform X1 [Benincasa hispida]1.1e-17094.5Show/hide
Query:  MRGLQISLNHTQKIRLQRARERLESLSSKANSDASVIVADTIPLNYEDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDIVVGRVT
        MRGLQISLNHTQKIRLQRA+ERLESLSSKANSDASVIVADTIPLNYEDGVLKGHGTLDLNGEV+ATICGVVERVNKLIYVRALRARYKPEVGDIVVGRVT
Subjt:  MRGLQISLNHTQKIRLQRARERLESLSSKANSDASVIVADTIPLNYEDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDIVVGRVT

Query:  EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQMLTVSPYLVKRRKQHFHHLE
        EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQ+LTV  YLVKRRKQHFHHLE
Subjt:  EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQMLTVSPYLVKRRKQHFHHLE

Query:  QYGIDLILGCNGFIWIGEHVDPKEDMMIEDQVNISEQKGSKFEGTFGNQVQERVYTPLTTRQNICRTANAIRVLSILGFIITVEVVMEIVSLSISMNIDV
        QYGIDLILGCNGFIWIGEHVDP EDMMI+DQ+N SEQKG KFEGTF NQVQ+RVYTPL TRQNICRTANAIRVLSILGFI+TVEV+MEIVSLSISMNIDV
Subjt:  QYGIDLILGCNGFIWIGEHVDPKEDMMIEDQVNISEQKGSKFEGTFGNQVQERVYTPLTTRQNICRTANAIRVLSILGFIITVEVVMEIVSLSISMNIDV

Query:  HEMLGSEFCILTAEKEVERRSLSKKRG
        HEMLGSEFC+LTAEKEVERR+ SKKRG
Subjt:  HEMLGSEFCILTAEKEVERRSLSKKRG

XP_038882865.1 exosome complex component RRP4 homolog isoform X2 [Benincasa hispida]1.1e-17094.5Show/hide
Query:  MRGLQISLNHTQKIRLQRARERLESLSSKANSDASVIVADTIPLNYEDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDIVVGRVT
        MRGLQISLNHTQKIRLQRA+ERLESLSSKANSDASVIVADTIPLNYEDGVLKGHGTLDLNGEV+ATICGVVERVNKLIYVRALRARYKPEVGDIVVGRVT
Subjt:  MRGLQISLNHTQKIRLQRARERLESLSSKANSDASVIVADTIPLNYEDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDIVVGRVT

Query:  EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQMLTVSPYLVKRRKQHFHHLE
        EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQ+LTV  YLVKRRKQHFHHLE
Subjt:  EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQMLTVSPYLVKRRKQHFHHLE

Query:  QYGIDLILGCNGFIWIGEHVDPKEDMMIEDQVNISEQKGSKFEGTFGNQVQERVYTPLTTRQNICRTANAIRVLSILGFIITVEVVMEIVSLSISMNIDV
        QYGIDLILGCNGFIWIGEHVDP EDMMI+DQ+N SEQKG KFEGTF NQVQ+RVYTPL TRQNICRTANAIRVLSILGFI+TVEV+MEIVSLSISMNIDV
Subjt:  QYGIDLILGCNGFIWIGEHVDPKEDMMIEDQVNISEQKGSKFEGTFGNQVQERVYTPLTTRQNICRTANAIRVLSILGFIITVEVVMEIVSLSISMNIDV

Query:  HEMLGSEFCILTAEKEVERRSLSKKRG
        HEMLGSEFC+LTAEKEVERR+ SKKRG
Subjt:  HEMLGSEFCILTAEKEVERRSLSKKRG

TrEMBL top hitse value%identityAlignment
A0A1S3B5H2 exosome complex component RRP4 homolog isoform X12.9e-16190.52Show/hide
Query:  MRGLQISLNHTQKIRLQRARERLESLSSKANSDASVIVADTIPLNYEDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDIVVGRVT
        MRGLQ+SLNHTQKIRL+RA+ERL+SLSSK NSDASV+VADTIPLNYEDGVLKGHGTLDLNGEVVA+ICGVVERVNKLIYVRALRARYKPEVGDIVVGRVT
Subjt:  MRGLQISLNHTQKIRLQRARERLESLSSKANSDASVIVADTIPLNYEDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDIVVGRVT

Query:  EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQMLTVSPYLVKRRKQHFHHLE
        EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQ+L VSPYL+KRRKQHFHHL+
Subjt:  EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQMLTVSPYLVKRRKQHFHHLE

Query:  QYGIDLILGCNGFIWIGEHVDPKEDMMIEDQVNISEQKGSKFEGTFGNQVQERVYTPLTTRQNICRTANAIRVLSILGFIITVEVVMEIVSLSISMNIDV
        QYGIDLILGCNGFIWIGEHVDPKED MIED V+  EQK  KFEGT    VQE VYTPL TRQNICRTANAIRVLS LGFI+TVEV+MEIV+LSIS+NIDV
Subjt:  QYGIDLILGCNGFIWIGEHVDPKEDMMIEDQVNISEQKGSKFEGTFGNQVQERVYTPLTTRQNICRTANAIRVLSILGFIITVEVVMEIVSLSISMNIDV

Query:  HEMLGSEFCILTAEKEVERRSLSKKRG
        HEMLGSEFC+LTAEKEVERRS SKKRG
Subjt:  HEMLGSEFCILTAEKEVERRSLSKKRG

A0A6J1EXY1 exosome complex component RRP4 homolog6.0e-16791.69Show/hide
Query:  MRGLQISLNHTQKIRLQRARERLESLSSKANSDASVIVADTIPLNYEDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDIVVGRVT
        MRGLQ+SLN TQKIRLQRA E LES+SSKANSDASV+VADTIPLNYEDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDI+VGRVT
Subjt:  MRGLQISLNHTQKIRLQRARERLESLSSKANSDASVIVADTIPLNYEDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDIVVGRVT

Query:  EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQMLTVSPYLVKRRKQHFHHLE
        EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMR+IFEENDVICAEVRG QHDGLHLQARSQKYGKLERGQ+LTVSPYLVKRRKQHFHHLE
Subjt:  EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQMLTVSPYLVKRRKQHFHHLE

Query:  QYGIDLILGCNGFIWIGEHVDPKEDMMIEDQVNISEQKGSKFEGTFGNQVQERVYTPLTTRQNICRTANAIRVLSILGFIITVEVVMEIVSLSISMNIDV
        QYGIDLILGCNGFIWIGEHVDP EDMM+ED +N SEQKGSKFEG+FGNQVQER+YTPL TRQNICRTANAIRVLSILGFI++VEV+ME VSLSIS+NIDV
Subjt:  QYGIDLILGCNGFIWIGEHVDPKEDMMIEDQVNISEQKGSKFEGTFGNQVQERVYTPLTTRQNICRTANAIRVLSILGFIITVEVVMEIVSLSISMNIDV

Query:  HEMLGSEFCILTAEKEVERRSLSKK
        HEMLGSEFC+LTAEKE ERR+ SKK
Subjt:  HEMLGSEFCILTAEKEVERRSLSKK

A0A6J1HGD9 exosome complex component RRP4 homolog isoform X11.7e-16692.35Show/hide
Query:  MRGLQISLNHTQKIRLQRARERLESLSSKANSDASVIVADTIPLNYEDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDIVVGRVT
        MR LQISLN TQKIRLQRA E LES+SSKANSDASVIVADTIPLNY+DGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDI+VGRVT
Subjt:  MRGLQISLNHTQKIRLQRARERLESLSSKANSDASVIVADTIPLNYEDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDIVVGRVT

Query:  EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQMLTVSPYLVKRRKQHFHHLE
        EVAPKRWRL+INYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRG QHDGLHLQARSQKYGKLERGQ+LTVSPYLVKRRKQHFHHLE
Subjt:  EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQMLTVSPYLVKRRKQHFHHLE

Query:  QYGIDLILGCNGFIWIGEHVDPKEDMMIEDQVNISEQKGSKFEGTFGNQVQERVYTPLTTRQNICRTANAIRVLSILGFIITVEVVMEIVSLSISMNIDV
        QYGIDLI GCNGFIWIGEHVDP EDMMIEDQVN SEQKGSKFEGTFGNQVQERVYTPL TRQNICRTANAIRVLS LGFI+TVEV+ME VSLS S+NI+V
Subjt:  QYGIDLILGCNGFIWIGEHVDPKEDMMIEDQVNISEQKGSKFEGTFGNQVQERVYTPLTTRQNICRTANAIRVLSILGFIITVEVVMEIVSLSISMNIDV

Query:  HEMLGSEFCILTAEKEVERRSLSKKRG
        HEMLGSEFC+LTAEKE ERR+ SKKRG
Subjt:  HEMLGSEFCILTAEKEVERRSLSKKRG

A0A6J1HVC7 exosome complex component RRP4 homolog isoform X14.5e-16290.21Show/hide
Query:  MRGLQISLNHTQKIRLQRARERLESLSSKANSDASVIVADTIPLNYEDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDIVVGRVT
        MR LQISLN TQ+IRLQRA E LES+SSKANSDASVIVADTIPLNY+DGVLKGHGTLDLNGEVVATICGVVER+NKLIYVRALRARYKPEVGDI+VGRVT
Subjt:  MRGLQISLNHTQKIRLQRARERLESLSSKANSDASVIVADTIPLNYEDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDIVVGRVT

Query:  EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQMLTVSPYLVKRRKQHFHHLE
        EVAPKRWRL+INYSQDAVLMLSSMNLPDGIQRR+TA DELNMRSIFEENDVICAEVRG QHDGLHLQARSQKYGK+ERGQ+LTVSPYLVKRRKQHFHHLE
Subjt:  EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQMLTVSPYLVKRRKQHFHHLE

Query:  QYGIDLILGCNGFIWIGEHVDPKEDMMIEDQVNISEQKGSKFEGTFGNQVQERVYTPLTTRQNICRTANAIRVLSILGFIITVEVVMEIVSLSISMNIDV
        QYGIDLI GCNGFI IGE VDP EDMMIEDQVN SEQKGSKFEGTFGNQVQERVYTPL TRQNICRTANAIRVLS LGFI+TVEV+ME VSLS+S+NI+V
Subjt:  QYGIDLILGCNGFIWIGEHVDPKEDMMIEDQVNISEQKGSKFEGTFGNQVQERVYTPLTTRQNICRTANAIRVLSILGFIITVEVVMEIVSLSISMNIDV

Query:  HEMLGSEFCILTAEKEVERRSLSKKRG
        HEMLGSEFC+LTAEKE ERR+ SKKRG
Subjt:  HEMLGSEFCILTAEKEVERRSLSKKRG

A0A6J1K7S0 exosome complex component RRP4 homolog2.7e-16791.44Show/hide
Query:  MRGLQISLNHTQKIRLQRARERLESLSSKANSDASVIVADTIPLNYEDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDIVVGRVT
        MRGLQ+SLN TQKIRLQRA E LES+SSKANSDASV+VADTIPLNYEDGVLKGHGTLDL GEVVATICGVVERVNKLIYVRALRARYKPEVGDI+VGRVT
Subjt:  MRGLQISLNHTQKIRLQRARERLESLSSKANSDASVIVADTIPLNYEDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDIVVGRVT

Query:  EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQMLTVSPYLVKRRKQHFHHLE
        EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMR+IFEENDVICAEVRG QHDGLHLQARSQKYGKLERGQ+LTVSPYLVKRRKQHFHHLE
Subjt:  EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQMLTVSPYLVKRRKQHFHHLE

Query:  QYGIDLILGCNGFIWIGEHVDPKEDMMIEDQVNISEQKGSKFEGTFGNQVQERVYTPLTTRQNICRTANAIRVLSILGFIITVEVVMEIVSLSISMNIDV
        QYGIDLILGCNGFIWIGEHVDP EDMM+ED +N SEQKGSKFEG+FGNQVQER+YTPL TRQNICRTANAIRVLSILGFI++VEV+ME VSLSIS+NIDV
Subjt:  QYGIDLILGCNGFIWIGEHVDPKEDMMIEDQVNISEQKGSKFEGTFGNQVQERVYTPLTTRQNICRTANAIRVLSILGFIITVEVVMEIVSLSISMNIDV

Query:  HEMLGSEFCILTAEKEVERRSLSKKRG
        HEMLGSEFC+LTAEKE ERR+ SKKRG
Subjt:  HEMLGSEFCILTAEKEVERRSLSKKRG

SwissProt top hitse value%identityAlignment
Q09704 Exosome complex component rrp47.3e-4541.63Show/hide
Query:  LKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDIVVGRVTEVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEEND
        ++GHGT   +G + A++ G V+RVNKLI V+ LR++Y PE+GD+++G++ EV PKRW++DI   Q+AVLMLSS+NLP GIQRR+   DEL MRS F+E D
Subjt:  LKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDIVVGRVTEVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEEND

Query:  VICAEVRGLQHDG-LHLQARSQKYGKLERGQMLTVSPYLVKRRKQHFHHLEQYGIDLILGCNGFIWIGEHVDPKEDMMIEDQVNISEQKGSKFEGTFGNQ
        ++ AEV+    DG + +  RS KYGKL  G  L V P LV R K H + L   G+D+IL  NG++W+ +H + +        V+I+  +    E  + N+
Subjt:  VICAEVRGLQHDG-LHLQARSQKYGKLERGQMLTVSPYLVKRRKQHFHHLEQYGIDLILGCNGFIWIGEHVDPKEDMMIEDQVNISEQKGSKFEGTFGNQ

Query:  VQE-RVYTPLT-TRQNICRTANAIRVL-----SILGFIITVEVVMEIVSLSISMNID
          E   YT L  +R +IC    A R L     SI  F  +  V   +  L++  N+D
Subjt:  VQE-RVYTPLT-TRQNICRTANAIRVL-----SILGFIITVEVVMEIVSLSISMNID

Q13868 Exosome complex component RRP41.1e-4549.53Show/hide
Query:  KIRLQRARERLESLSSKANSDASVIVADTIPLNYEDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDIVVGRVTEVAPKRWRLDIN
        ++RL  AR+ L     +      V+  DTI    + G ++GHGT     +++A++ G VERVNKLI V+AL+ RY  EVGDIVVGR+TEV  KRW+++ N
Subjt:  KIRLQRARERLESLSSKANSDASVIVADTIPLNYEDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDIVVGRVTEVAPKRWRLDIN

Query:  YSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDG-LHLQARSQKYGKLERGQMLTVSPYLVKRRKQHFHHLEQYGIDLILGCN
           D+VL+LSSMNLP G  RRR+A DEL MR   +E D+I AEV+ +  DG + L  RS KYGKL +G ++ VSP LVKR+K HFH L   G  +ILG N
Subjt:  YSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDG-LHLQARSQKYGKLERGQMLTVSPYLVKRRKQHFHHLEQYGIDLILGCN

Query:  GFIWIGEHVDPKED
        GFIWI    + KE+
Subjt:  GFIWIGEHVDPKED

Q2KID0 Exosome complex component RRP41.3e-4649.53Show/hide
Query:  KIRLQRARERLESLSSKANSDASVIVADTIPLNYEDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDIVVGRVTEVAPKRWRLDIN
        ++RL  AR+ L     + +    V+  DTI    + G ++GHGT     +++A++ G VERVNKLI V+AL+ RY  EVGDIVVGR+TEV  KRW+++ N
Subjt:  KIRLQRARERLESLSSKANSDASVIVADTIPLNYEDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDIVVGRVTEVAPKRWRLDIN

Query:  YSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDG-LHLQARSQKYGKLERGQMLTVSPYLVKRRKQHFHHLEQYGIDLILGCN
           D+VL+LSSMNLP G  RRR+A DEL MR   +E D+I AEV+ +  DG + L  RS KYGKL +G ++ VSP LVKR+K HFH L   G  +ILG N
Subjt:  YSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDG-LHLQARSQKYGKLERGQMLTVSPYLVKRRKQHFHHLEQYGIDLILGCN

Query:  GFIWIGEHVDPKED
        GFIW+    + KED
Subjt:  GFIWIGEHVDPKED

Q8VBV3 Exosome complex component RRP42.3e-4650.23Show/hide
Query:  KIRLQRARERLESLSSKANSDASVIVADTIPLNYEDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDIVVGRVTEVAPKRWRLDIN
        ++RL +AR+ L     + +    V+  DTI    + G ++GHGT     +++A++ G VERVNKLI V+AL+ RY  EVGDIVVGR+TEV  KRW+++ N
Subjt:  KIRLQRARERLESLSSKANSDASVIVADTIPLNYEDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDIVVGRVTEVAPKRWRLDIN

Query:  YSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDG-LHLQARSQKYGKLERGQMLTVSPYLVKRRKQHFHHLEQYGIDLILGCN
           D+VL+LSSMNLP G  RRR+A DEL MR   +E D+I AEV+ +  DG + L  RS KYGKL +G ++ VSP LVKR+K HFH L   G  +ILG N
Subjt:  YSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDG-LHLQARSQKYGKLERGQMLTVSPYLVKRRKQHFHHLEQYGIDLILGCN

Query:  GFIWI---GEHVD
        GFIWI    EH D
Subjt:  GFIWI---GEHVD

Q9ZVT7 Exosome complex component RRP4 homolog5.0e-11865.75Show/hide
Query:  MRGLQISLNHTQKIRLQRARERLESLSSKANSDASVIVADTIPLNYEDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDIVVGRVT
        MR LQ+ L+ TQK+R +RA ERL+SLSS ANSDASVIV D+IP+N++D  LKGHGT +++GE++AT+CGVVERV+KL+YVR LRARYKPEVGDIVVGRV 
Subjt:  MRGLQISLNHTQKIRLQRARERLESLSSKANSDASVIVADTIPLNYEDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDIVVGRVT

Query:  EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDG-LHLQARSQKYGKLERGQMLTVSPYLVKRRKQHFHHL
        EVA KRWR+++N++QD VLMLSSMN+PDGIQRRRT+VDELNMR+IF E+DV+CAEVR  QHDG L LQARSQKYGKLE+GQ+L V PYLVKR K HFH++
Subjt:  EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDG-LHLQARSQKYGKLERGQMLTVSPYLVKRRKQHFHHL

Query:  EQYGIDLILGCNGFIWIGEHVDPKEDMMIEDQVNISEQKGSKFEGTFGNQVQERVYTPLTTRQNICRTANAIRVLSILGFIITVEVVMEIVSLSISMNID
        E  GIDLI+GCNGFIW+GEHV+ ++ M I+DQ +  E   S   G      +E+ + PL TRQ ICR  NAIRVLS LGF +T+EV+ME V+LS S NID
Subjt:  EQYGIDLILGCNGFIWIGEHVDPKEDMMIEDQVNISEQKGSKFEGTFGNQVQERVYTPLTTRQNICRTANAIRVLSILGFIITVEVVMEIVSLSISMNID

Query:  VHEMLGSEFCILTAEKEVERRSLSKKR
        +H+MLGSEF ++ AE E ERR   +K+
Subjt:  VHEMLGSEFCILTAEKEVERRSLSKKR

Arabidopsis top hitse value%identityAlignment
AT1G03360.1 ribosomal RNA processing 43.5e-11965.75Show/hide
Query:  MRGLQISLNHTQKIRLQRARERLESLSSKANSDASVIVADTIPLNYEDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDIVVGRVT
        MR LQ+ L+ TQK+R +RA ERL+SLSS ANSDASVIV D+IP+N++D  LKGHGT +++GE++AT+CGVVERV+KL+YVR LRARYKPEVGDIVVGRV 
Subjt:  MRGLQISLNHTQKIRLQRARERLESLSSKANSDASVIVADTIPLNYEDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDIVVGRVT

Query:  EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDG-LHLQARSQKYGKLERGQMLTVSPYLVKRRKQHFHHL
        EVA KRWR+++N++QD VLMLSSMN+PDGIQRRRT+VDELNMR+IF E+DV+CAEVR  QHDG L LQARSQKYGKLE+GQ+L V PYLVKR K HFH++
Subjt:  EVAPKRWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDG-LHLQARSQKYGKLERGQMLTVSPYLVKRRKQHFHHL

Query:  EQYGIDLILGCNGFIWIGEHVDPKEDMMIEDQVNISEQKGSKFEGTFGNQVQERVYTPLTTRQNICRTANAIRVLSILGFIITVEVVMEIVSLSISMNID
        E  GIDLI+GCNGFIW+GEHV+ ++ M I+DQ +  E   S   G      +E+ + PL TRQ ICR  NAIRVLS LGF +T+EV+ME V+LS S NID
Subjt:  EQYGIDLILGCNGFIWIGEHVDPKEDMMIEDQVNISEQKGSKFEGTFGNQVQERVYTPLTTRQNICRTANAIRVLSILGFIITVEVVMEIVSLSISMNID

Query:  VHEMLGSEFCILTAEKEVERRSLSKKR
        +H+MLGSEF ++ AE E ERR   +K+
Subjt:  VHEMLGSEFCILTAEKEVERRSLSKKR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAGGTTTACAGATTTCCTTGAATCATACCCAGAAGATTCGGCTTCAAAGAGCCCGAGAAAGGCTCGAATCTCTCTCATCGAAGGCCAATTCTGATGCTTCT
GTTATAGTTGCTGATACTATTCCTCTCAATTACGAGGATGGTGTCCTCAAGGGACATGGGACCCTTGACTTGAATGGAGAAGTTGTTGCCACTATTTGTGGAGTG
GTTGAGCGAGTCAATAAGCTTATCTATGTACGCGCCTTACGTGCCAGATATAAACCGGAGGTTGGCGATATTGTAGTGGGACGTGTTACAGAGGTTGCTCCTAAA
CGTTGGAGATTGGATATAAATTATAGCCAAGATGCAGTTTTGATGCTTTCTTCGATGAACTTGCCTGATGGTATTCAGAGGAGGCGAACTGCTGTTGATGAACTC
AACATGAGGAGCATTTTTGAAGAAAATGATGTCATTTGTGCCGAAGTACGTGGTCTTCAGCATGATGGGCTACACCTTCAAGCAAGAAGCCAGAAGTATGGGAAG
CTTGAACGTGGTCAGATGCTCACAGTTTCACCATATCTAGTAAAGAGACGCAAACAACACTTCCATCATTTGGAGCAATATGGTATTGACCTAATACTTGGATGC
AATGGATTTATCTGGATTGGGGAGCATGTTGATCCCAAAGAGGATATGATGATAGAGGATCAAGTTAATATATCTGAACAAAAGGGTTCAAAATTTGAAGGCACT
TTTGGTAACCAAGTGCAAGAAAGAGTATATACTCCATTAACAACACGGCAGAATATATGCAGAACTGCAAATGCGATTCGGGTATTGTCTATCTTAGGTTTCATA
ATTACAGTAGAAGTCGTAATGGAGATAGTTAGTCTAAGTATTTCTATGAACATTGATGTGCATGAAATGCTCGGTTCGGAGTTCTGCATTCTCACGGCGGAAAAA
GAGGTCGAACGACGTAGTTTGAGTAAGAAGAGGGGGTGA
mRNA sequenceShow/hide mRNA sequence
AAAAGAAAAAAGAAAGGAAACAAAAAGAAAAAGAAATAGAAAAAGAAACCTAGTACAGCGTCAGCACCTTCTTCCTTCCTTCCCCTCTCATTCAAGCAGCCGTAC
TGTCGCCCGCCTGCTCAGTCTCCTTCTCCGGTGAGCCTCCAGCAGCCACAGGCGGAAGGCAGCGACGACTGGAACCCACAACCACTCGAACGCCCAGCTCTGTCG
TCGACGGCGGCTTAAGTTCACTGGGCGCCACTTCAAGGCCGCCTAGGCCTTTGCAGCATCGTTTCTTCTCCGTTCGAGACTCCAGCGCGAACAACAGGTTGTTCA
ACACGTTTCTGATGACTGTGTGGGTCTTGCAGCGGCGTTTCTGACCTAGGATTTGCAAGTTCGGACGTTTTTGAACACCAACCAGCAAGGTTCAGAGTATTTTCA
GTAAGATTTGCTTGCTGTTTGTATTTTTGGACTTCTTCGGAGTGATCGGTTAACATTTACGATAGATTTTGGACTTCGAGGAAGTTGACATTTGTTCAAGAAAGT
AAATTTTTGATTGAGAATTGCAGGATTGTCGATTGAGATATGAGAGGTTTACAGATTTCCTTGAATCATACCCAGAAGATTCGGCTTCAAAGAGCCCGAGAAAGG
CTCGAATCTCTCTCATCGAAGGCCAATTCTGATGCTTCTGTTATAGTTGCTGATACTATTCCTCTCAATTACGAGGATGGTGTCCTCAAGGGACATGGGACCCTT
GACTTGAATGGAGAAGTTGTTGCCACTATTTGTGGAGTGGTTGAGCGAGTCAATAAGCTTATCTATGTACGCGCCTTACGTGCCAGATATAAACCGGAGGTTGGC
GATATTGTAGTGGGACGTGTTACAGAGGTTGCTCCTAAACGTTGGAGATTGGATATAAATTATAGCCAAGATGCAGTTTTGATGCTTTCTTCGATGAACTTGCCT
GATGGTATTCAGAGGAGGCGAACTGCTGTTGATGAACTCAACATGAGGAGCATTTTTGAAGAAAATGATGTCATTTGTGCCGAAGTACGTGGTCTTCAGCATGAT
GGGCTACACCTTCAAGCAAGAAGCCAGAAGTATGGGAAGCTTGAACGTGGTCAGATGCTCACAGTTTCACCATATCTAGTAAAGAGACGCAAACAACACTTCCAT
CATTTGGAGCAATATGGTATTGACCTAATACTTGGATGCAATGGATTTATCTGGATTGGGGAGCATGTTGATCCCAAAGAGGATATGATGATAGAGGATCAAGTT
AATATATCTGAACAAAAGGGTTCAAAATTTGAAGGCACTTTTGGTAACCAAGTGCAAGAAAGAGTATATACTCCATTAACAACACGGCAGAATATATGCAGAACT
GCAAATGCGATTCGGGTATTGTCTATCTTAGGTTTCATAATTACAGTAGAAGTCGTAATGGAGATAGTTAGTCTAAGTATTTCTATGAACATTGATGTGCATGAA
ATGCTCGGTTCGGAGTTCTGCATTCTCACGGCGGAAAAAGAGGTCGAACGACGTAGTTTGAGTAAGAAGAGGGGGTGATGGTTTTGTAGAATTTTAGATTACCAC
CACTTGGTCTCTGTAGTATTAACAGTTTAGAATGCAATATTTGCTTAATTATTCTATAGTACGTGGTTTCATAAATGTCGAAGAATTACTTTTAGGATTTTACTA
TGTCATATTATTGGTTTAGATTAGTACTTGACGAAACATAACTTTACTAAATGTAATATTTCTGCTGATGATTGTATCTTTATCATGCATCTTCATTGCTTGAAG
GCAATTTTATGGTTTTTGATTGCTTGCCAA
Protein sequenceShow/hide protein sequence
MRGLQISLNHTQKIRLQRARERLESLSSKANSDASVIVADTIPLNYEDGVLKGHGTLDLNGEVVATICGVVERVNKLIYVRALRARYKPEVGDIVVGRVTEVAPK
RWRLDINYSQDAVLMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQMLTVSPYLVKRRKQHFHHLEQYGIDLILGC
NGFIWIGEHVDPKEDMMIEDQVNISEQKGSKFEGTFGNQVQERVYTPLTTRQNICRTANAIRVLSILGFIITVEVVMEIVSLSISMNIDVHEMLGSEFCILTAEK
EVERRSLSKKRG