; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CaUC04G072040 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC04G072040
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionNADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1
Genome locationCiama_Chr04:20542207..20542545
RNA-Seq ExpressionCaUC04G072040
SyntenyCaUC04G072040
Gene Ontology termsGO:0005739 - mitochondrion (cellular component)
GO:0016020 - membrane (cellular component)
InterPro domainsIPR017384 - NADH dehydrogenase [ubiquinone] (complex I), alpha subcomplex subunit 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7033699.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, partial [Cucurbita argyrosperma subsp. argyrosperma]1.5e-2357.14Show/hide
Query:  MGWRWLEAALPLGIIAGMLCIMGNAQYHIHKAAHGRVIYFVLLLILAFSPFLCSMDLLSPSSDQRSLELVFDFDFCCSSFVQPKHIGNDMWDVAMERRDK
        MGWRWLEAALPLGIIAGMLCIMGNAQYHIHKAAHGR                                              PKHIGNDMWDVAMERRDK
Subjt:  MGWRWLEAALPLGIIAGMLCIMGNAQYHIHKAAHGRVIYFVLLLILAFSPFLCSMDLLSPSSDQRSLELVFDFDFCCSSFVQPKHIGNDMWDVAMERRDK

Query:  KLVENLSATSHS
        KLVEN+SA SHS
Subjt:  KLVENLSATSHS
XP_004142669.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 [Cucumis sativus]9.9e-2355.86Show/hide
Query:  GWRWLEAALPLGIIAGMLCIMGNAQYHIHKAAHGRVIYFVLLLILAFSPFLCSMDLLSPSSDQRSLELVFDFDFCCSSFVQPKHIGNDMWDVAMERRDKK
        GWRWLEAALPLGIIAGMLC+MGNAQY+IHKAAHGR                                              PKHIGNDMWDVAMERRDKK
Subjt:  GWRWLEAALPLGIIAGMLCIMGNAQYHIHKAAHGRVIYFVLLLILAFSPFLCSMDLLSPSSDQRSLELVFDFDFCCSSFVQPKHIGNDMWDVAMERRDKK

Query:  LVENLSATSHS
        LVENLSA SHS
Subjt:  LVENLSATSHS
XP_008463294.1 PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 [Cucumis melo]2.6e-2356.76Show/hide
Query:  GWRWLEAALPLGIIAGMLCIMGNAQYHIHKAAHGRVIYFVLLLILAFSPFLCSMDLLSPSSDQRSLELVFDFDFCCSSFVQPKHIGNDMWDVAMERRDKK
        GWRWLEAALPLGIIAGMLC+MGNAQY+IHKAAHGR                                              PKHIGNDMWDVAMERRDKK
Subjt:  GWRWLEAALPLGIIAGMLCIMGNAQYHIHKAAHGRVIYFVLLLILAFSPFLCSMDLLSPSSDQRSLELVFDFDFCCSSFVQPKHIGNDMWDVAMERRDKK

Query:  LVENLSATSHS
        LVENLSATSHS
Subjt:  LVENLSATSHS
XP_022950918.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 [Cucurbita moschata]1.5e-2357.14Show/hide
Query:  MGWRWLEAALPLGIIAGMLCIMGNAQYHIHKAAHGRVIYFVLLLILAFSPFLCSMDLLSPSSDQRSLELVFDFDFCCSSFVQPKHIGNDMWDVAMERRDK
        MGWRWLEAALPLGIIAGMLCIMGNAQYHIHKAAHGR                                              PKHIGNDMWDVAMERRDK
Subjt:  MGWRWLEAALPLGIIAGMLCIMGNAQYHIHKAAHGRVIYFVLLLILAFSPFLCSMDLLSPSSDQRSLELVFDFDFCCSSFVQPKHIGNDMWDVAMERRDK

Query:  KLVENLSATSHS
        KLVEN+SA SHS
Subjt:  KLVENLSATSHS
XP_038881013.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 [Benincasa hispida]2.6e-2356.76Show/hide
Query:  GWRWLEAALPLGIIAGMLCIMGNAQYHIHKAAHGRVIYFVLLLILAFSPFLCSMDLLSPSSDQRSLELVFDFDFCCSSFVQPKHIGNDMWDVAMERRDKK
        GWRW+EAALPLGIIAGMLCIMGNAQYHIHKAAHGR                                              PKHIGNDMWDVAMERRDKK
Subjt:  GWRWLEAALPLGIIAGMLCIMGNAQYHIHKAAHGRVIYFVLLLILAFSPFLCSMDLLSPSSDQRSLELVFDFDFCCSSFVQPKHIGNDMWDVAMERRDKK

Query:  LVENLSATSHS
        LVENLSA SHS
Subjt:  LVENLSATSHS
TrEMBL top hitse value%identityAlignment
A0A0A0L2Y7 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 14.8e-2355.86Show/hide
Query:  GWRWLEAALPLGIIAGMLCIMGNAQYHIHKAAHGRVIYFVLLLILAFSPFLCSMDLLSPSSDQRSLELVFDFDFCCSSFVQPKHIGNDMWDVAMERRDKK
        GWRWLEAALPLGIIAGMLC+MGNAQY+IHKAAHGR                                              PKHIGNDMWDVAMERRDKK
Subjt:  GWRWLEAALPLGIIAGMLCIMGNAQYHIHKAAHGRVIYFVLLLILAFSPFLCSMDLLSPSSDQRSLELVFDFDFCCSSFVQPKHIGNDMWDVAMERRDKK

Query:  LVENLSATSHS
        LVENLSA SHS
Subjt:  LVENLSATSHS
A0A1S3CIY2 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 11.3e-2356.76Show/hide
Query:  GWRWLEAALPLGIIAGMLCIMGNAQYHIHKAAHGRVIYFVLLLILAFSPFLCSMDLLSPSSDQRSLELVFDFDFCCSSFVQPKHIGNDMWDVAMERRDKK
        GWRWLEAALPLGIIAGMLC+MGNAQY+IHKAAHGR                                              PKHIGNDMWDVAMERRDKK
Subjt:  GWRWLEAALPLGIIAGMLCIMGNAQYHIHKAAHGRVIYFVLLLILAFSPFLCSMDLLSPSSDQRSLELVFDFDFCCSSFVQPKHIGNDMWDVAMERRDKK

Query:  LVENLSATSHS
        LVENLSATSHS
Subjt:  LVENLSATSHS
A0A5D3C7B6 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 11.3e-2356.76Show/hide
Query:  GWRWLEAALPLGIIAGMLCIMGNAQYHIHKAAHGRVIYFVLLLILAFSPFLCSMDLLSPSSDQRSLELVFDFDFCCSSFVQPKHIGNDMWDVAMERRDKK
        GWRWLEAALPLGIIAGMLC+MGNAQY+IHKAAHGR                                              PKHIGNDMWDVAMERRDKK
Subjt:  GWRWLEAALPLGIIAGMLCIMGNAQYHIHKAAHGRVIYFVLLLILAFSPFLCSMDLLSPSSDQRSLELVFDFDFCCSSFVQPKHIGNDMWDVAMERRDKK

Query:  LVENLSATSHS
        LVENLSATSHS
Subjt:  LVENLSATSHS
A0A6J1GH44 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 17.4e-2457.14Show/hide
Query:  MGWRWLEAALPLGIIAGMLCIMGNAQYHIHKAAHGRVIYFVLLLILAFSPFLCSMDLLSPSSDQRSLELVFDFDFCCSSFVQPKHIGNDMWDVAMERRDK
        MGWRWLEAALPLGIIAGMLCIMGNAQYHIHKAAHGR                                              PKHIGNDMWDVAMERRDK
Subjt:  MGWRWLEAALPLGIIAGMLCIMGNAQYHIHKAAHGRVIYFVLLLILAFSPFLCSMDLLSPSSDQRSLELVFDFDFCCSSFVQPKHIGNDMWDVAMERRDK

Query:  KLVENLSATSHS
        KLVEN+SA SHS
Subjt:  KLVENLSATSHS
A0A6J1HU02 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 11.4e-2254.95Show/hide
Query:  MGWRWLEAALPLGIIAGMLCIMGNAQYHIHKAAHGRVIYFVLLLILAFSPFLCSMDLLSPSSDQRSLELVFDFDFCCSSFVQPKHIGNDMWDVAMERRDK
        M WRW+EAALPLGIIAGMLCIMGNAQYHIHKAAHGR                                              PKHIGNDMWDVAMERRDK
Subjt:  MGWRWLEAALPLGIIAGMLCIMGNAQYHIHKAAHGRVIYFVLLLILAFSPFLCSMDLLSPSSDQRSLELVFDFDFCCSSFVQPKHIGNDMWDVAMERRDK

Query:  KLVENLSATSH
        KLVEN SA SH
Subjt:  KLVENLSATSH
SwissProt top hitse value%identityAlignment
Q9C9Z5 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13.2e-1645.28Show/hide
Query:  WLEAALPLGIIAGMLCIMGNAQYHIHKAAHGRVIYFVLLLILAFSPFLCSMDLLSPSSDQRSLELVFDFDFCCSSFVQPKHIGNDMWDVAMERRDKKLVE
        WLEA LPLGII GMLCIMGN+QY+IHKA HGR                                              PKHIG+D WDVAMERRDKK+VE
Subjt:  WLEAALPLGIIAGMLCIMGNAQYHIHKAAHGRVIYFVLLLILAFSPFLCSMDLLSPSSDQRSLELVFDFDFCCSSFVQPKHIGNDMWDVAMERRDKKLVE

Query:  NLSATS
          +A S
Subjt:  NLSATS
Arabidopsis top hitse value%identityAlignment
AT3G08610.1 unknown protein2.3e-1745.28Show/hide
Query:  WLEAALPLGIIAGMLCIMGNAQYHIHKAAHGRVIYFVLLLILAFSPFLCSMDLLSPSSDQRSLELVFDFDFCCSSFVQPKHIGNDMWDVAMERRDKKLVE
        WLEA LPLGII GMLCIMGN+QY+IHKA HGR                                              PKHIG+D WDVAMERRDKK+VE
Subjt:  WLEAALPLGIIAGMLCIMGNAQYHIHKAAHGRVIYFVLLLILAFSPFLCSMDLLSPSSDQRSLELVFDFDFCCSSFVQPKHIGNDMWDVAMERRDKKLVE

Query:  NLSATS
          +A S
Subjt:  NLSATS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGATGGAGATGGCTGGAAGCGGCACTTCCTCTGGGAATTATCGCCGGAATGCTCTGTATAATGGGAAATGCTCAATATCACATCCACAAAGCCGCCCATGGA
CGGGTAATTTACTTTGTACTGCTTTTGATTTTAGCGTTTTCCCCTTTTCTTTGCTCAATGGATCTCCTTTCTCCGAGTTCCGATCAACGATCTCTGGAATTAGTT
TTCGATTTTGATTTCTGTTGTTCGTCGTTTGTGCAGCCGAAGCACATCGGTAATGATATGTGGGATGTTGCCATGGAACGGAGGGACAAGAAACTTGTGGAGAAT
CTCTCCGCCACTTCTCATAGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGATGGAGATGGCTGGAAGCGGCACTTCCTCTGGGAATTATCGCCGGAATGCTCTGTATAATGGGAAATGCTCAATATCACATCCACAAAGCCGCCCATGGA
CGGGTAATTTACTTTGTACTGCTTTTGATTTTAGCGTTTTCCCCTTTTCTTTGCTCAATGGATCTCCTTTCTCCGAGTTCCGATCAACGATCTCTGGAATTAGTT
TTCGATTTTGATTTCTGTTGTTCGTCGTTTGTGCAGCCGAAGCACATCGGTAATGATATGTGGGATGTTGCCATGGAACGGAGGGACAAGAAACTTGTGGAGAAT
CTCTCCGCCACTTCTCATAGTTAA
Protein sequenceShow/hide protein sequence
MGWRWLEAALPLGIIAGMLCIMGNAQYHIHKAAHGRVIYFVLLLILAFSPFLCSMDLLSPSSDQRSLELVFDFDFCCSSFVQPKHIGNDMWDVAMERRDKKLVEN
LSATSHS