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CaUC04G072430 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC04G072430
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
Descriptiontranscription factor SCREAM2-like
Genome locationCiama_Chr04:21188128..21189857
RNA-Seq ExpressionCaUC04G072430
SyntenyCaUC04G072430
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0043565 - sequence-specific DNA binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008464258.1 PREDICTED: uncharacterized protein LOC103502184 [Cucumis melo]3.3e-4175.91Show/hide
Query:  ERKKAAA---SSHQKSKEFRASTSSSAVVNVENLERGFLINVFLERNSPGLLVRILEAFEKLGLEVLDADVSCSDCFQLQAVGEEVRSLFQNITLKFESD
        ERKKAAA   SSH  SKEFRASTSSSAVVNVE++ERGFLINVFLERNSPGLLVRILEAFEKLGL VLDAD+SCSDCFQLQAVGEE               
Subjt:  ERKKAAA---SSHQKSKEFRASTSSSAVVNVENLERGFLINVFLERNSPGLLVRILEAFEKLGLEVLDADVSCSDCFQLQAVGEEVRSLFQNITLKFESD

Query:  QHKYRSSNEGTKIIKAQVVKNAVKQAIKEWSESNGQA
               NEG KIIKAQVVKNAVKQAIKEWSES+GQA
Subjt:  QHKYRSSNEGTKIIKAQVVKNAVKQAIKEWSESNGQA
XP_022950375.1 uncharacterized protein LOC111453491 [Cucurbita moschata]7.1e-4480.15Show/hide
Query:  ERKKAAASS--HQKSKEFRASTSSSAVVNVENLERGFLINVFLERNSPGLLVRILEAFEKLGLEVLDADVSCSDCFQLQAVGEEVRSLFQNITLKFESDQ
        ERKKAAASS  H KSKEFRASTSSSAVVNVENLERGFLINVF ERNSPGLLV+ILEAFEKLGLEVLDADVSCSDCFQLQAVGEE                
Subjt:  ERKKAAASS--HQKSKEFRASTSSSAVVNVENLERGFLINVFLERNSPGLLVRILEAFEKLGLEVLDADVSCSDCFQLQAVGEEVRSLFQNITLKFESDQ

Query:  HKYRSSNEGTKIIKAQVVKNAVKQAIKEWSESNGQA
              NEGTKIIKAQVVKNAVKQAIKEWSESNGQA
Subjt:  HKYRSSNEGTKIIKAQVVKNAVKQAIKEWSESNGQA
XP_022966518.1 uncharacterized protein LOC111466169 [Cucurbita maxima]6.7e-4262.22Show/hide
Query:  NSWSTLFQEA--HQEKSKNLWWRVGSE--RLRHGGVCNKFFRWPERKKAAASS---HQKSKEFRASTSSSAVVNVENLERGFLINVFLERNSPGLLVRIL
        NSWS  F  A   +++SK+LWW V  E  R   GG         ERKKAAASS   H+K  EF ASTSSSAVVNVE+L RGFLINV++E+NSPGLLVRIL
Subjt:  NSWSTLFQEA--HQEKSKNLWWRVGSE--RLRHGGVCNKFFRWPERKKAAASS---HQKSKEFRASTSSSAVVNVENLERGFLINVFLERNSPGLLVRIL

Query:  EAFEKLGLEVLDADVSCSDCFQLQAVGEEVRSLFQNITLKFESDQHKYRSSNEGTKIIKAQVVKNAVKQAIKEWSESNGQ
        EAFEKLGLEVLDA+VSCSDCFQLQAVGEE                      NE TK++K QVVK AVKQAIKEWSESNGQ
Subjt:  EAFEKLGLEVLDADVSCSDCFQLQAVGEEVRSLFQNITLKFESDQHKYRSSNEGTKIIKAQVVKNAVKQAIKEWSESNGQ
XP_022977370.1 uncharacterized protein LOC111477723 [Cucurbita maxima]9.3e-4480.15Show/hide
Query:  ERKKAAASS--HQKSKEFRASTSSSAVVNVENLERGFLINVFLERNSPGLLVRILEAFEKLGLEVLDADVSCSDCFQLQAVGEEVRSLFQNITLKFESDQ
        ERKKAAASS  H KSKEFRASTSSSAVVNVE+LERGFLINVF ERNSPGLLVRILEAFEKLGLEVLDADVSCSDCFQLQAVGEE                
Subjt:  ERKKAAASS--HQKSKEFRASTSSSAVVNVENLERGFLINVFLERNSPGLLVRILEAFEKLGLEVLDADVSCSDCFQLQAVGEEVRSLFQNITLKFESDQ

Query:  HKYRSSNEGTKIIKAQVVKNAVKQAIKEWSESNGQA
              NEGTKIIKAQVVKNAVKQAIKEWSESNGQA
Subjt:  HKYRSSNEGTKIIKAQVVKNAVKQAIKEWSESNGQA
XP_038882922.1 uncharacterized protein LOC120074022 [Benincasa hispida]4.9e-4580.6Show/hide
Query:  ERKKAAASSHQKSKEFRASTSSSAVVNVENLERGFLINVFLERNSPGLLVRILEAFEKLGLEVLDADVSCSDCFQLQAVGEEVRSLFQNITLKFESDQHK
        ERKKAAASSH KSKEFRASTSSSA+VNVE+LERGFLINVFLERNSPGLLVRILEAFEKLGLEVLDA+VSCSDCFQLQAVGEE                  
Subjt:  ERKKAAASSHQKSKEFRASTSSSAVVNVENLERGFLINVFLERNSPGLLVRILEAFEKLGLEVLDADVSCSDCFQLQAVGEEVRSLFQNITLKFESDQHK

Query:  YRSSNEGTKIIKAQVVKNAVKQAIKEWSESNGQA
            NEGTKIIKAQVVKNAVKQAIKEWSESNGQA
Subjt:  YRSSNEGTKIIKAQVVKNAVKQAIKEWSESNGQA
TrEMBL top hitse value%identityAlignment
A0A0A0L039 Uncharacterized protein3.9e-4073.72Show/hide
Query:  ERKKAAA----SSHQKSKEFRASTSSSAVVNVENLERGFLINVFLERNSPGLLVRILEAFEKLGLEVLDADVSCSDCFQLQAVGEEVRSLFQNITLKFES
        ERKKAAA    SSH  SKEFRASTSS+AVVNVE++ERGFLINVFLERNSPGLLVRILEAFEKLGL VLDAD+SCSDCFQLQA GEE              
Subjt:  ERKKAAA----SSHQKSKEFRASTSSSAVVNVENLERGFLINVFLERNSPGLLVRILEAFEKLGLEVLDADVSCSDCFQLQAVGEEVRSLFQNITLKFES

Query:  DQHKYRSSNEGTKIIKAQVVKNAVKQAIKEWSESNGQ
                NEG KIIKAQVVKNAVKQAIKEWSES+GQ
Subjt:  DQHKYRSSNEGTKIIKAQVVKNAVKQAIKEWSESNGQ
A0A1S3CLI8 uncharacterized protein LOC1035021841.6e-4175.91Show/hide
Query:  ERKKAAA---SSHQKSKEFRASTSSSAVVNVENLERGFLINVFLERNSPGLLVRILEAFEKLGLEVLDADVSCSDCFQLQAVGEEVRSLFQNITLKFESD
        ERKKAAA   SSH  SKEFRASTSSSAVVNVE++ERGFLINVFLERNSPGLLVRILEAFEKLGL VLDAD+SCSDCFQLQAVGEE               
Subjt:  ERKKAAA---SSHQKSKEFRASTSSSAVVNVENLERGFLINVFLERNSPGLLVRILEAFEKLGLEVLDADVSCSDCFQLQAVGEEVRSLFQNITLKFESD

Query:  QHKYRSSNEGTKIIKAQVVKNAVKQAIKEWSESNGQA
               NEG KIIKAQVVKNAVKQAIKEWSES+GQA
Subjt:  QHKYRSSNEGTKIIKAQVVKNAVKQAIKEWSESNGQA
A0A6J1GFJ5 uncharacterized protein LOC1114534913.4e-4480.15Show/hide
Query:  ERKKAAASS--HQKSKEFRASTSSSAVVNVENLERGFLINVFLERNSPGLLVRILEAFEKLGLEVLDADVSCSDCFQLQAVGEEVRSLFQNITLKFESDQ
        ERKKAAASS  H KSKEFRASTSSSAVVNVENLERGFLINVF ERNSPGLLV+ILEAFEKLGLEVLDADVSCSDCFQLQAVGEE                
Subjt:  ERKKAAASS--HQKSKEFRASTSSSAVVNVENLERGFLINVFLERNSPGLLVRILEAFEKLGLEVLDADVSCSDCFQLQAVGEEVRSLFQNITLKFESDQ

Query:  HKYRSSNEGTKIIKAQVVKNAVKQAIKEWSESNGQA
              NEGTKIIKAQVVKNAVKQAIKEWSESNGQA
Subjt:  HKYRSSNEGTKIIKAQVVKNAVKQAIKEWSESNGQA
A0A6J1HSD7 uncharacterized protein LOC1114661693.2e-4262.22Show/hide
Query:  NSWSTLFQEA--HQEKSKNLWWRVGSE--RLRHGGVCNKFFRWPERKKAAASS---HQKSKEFRASTSSSAVVNVENLERGFLINVFLERNSPGLLVRIL
        NSWS  F  A   +++SK+LWW V  E  R   GG         ERKKAAASS   H+K  EF ASTSSSAVVNVE+L RGFLINV++E+NSPGLLVRIL
Subjt:  NSWSTLFQEA--HQEKSKNLWWRVGSE--RLRHGGVCNKFFRWPERKKAAASS---HQKSKEFRASTSSSAVVNVENLERGFLINVFLERNSPGLLVRIL

Query:  EAFEKLGLEVLDADVSCSDCFQLQAVGEEVRSLFQNITLKFESDQHKYRSSNEGTKIIKAQVVKNAVKQAIKEWSESNGQ
        EAFEKLGLEVLDA+VSCSDCFQLQAVGEE                      NE TK++K QVVK AVKQAIKEWSESNGQ
Subjt:  EAFEKLGLEVLDADVSCSDCFQLQAVGEEVRSLFQNITLKFESDQHKYRSSNEGTKIIKAQVVKNAVKQAIKEWSESNGQ
A0A6J1IM47 uncharacterized protein LOC1114777234.5e-4480.15Show/hide
Query:  ERKKAAASS--HQKSKEFRASTSSSAVVNVENLERGFLINVFLERNSPGLLVRILEAFEKLGLEVLDADVSCSDCFQLQAVGEEVRSLFQNITLKFESDQ
        ERKKAAASS  H KSKEFRASTSSSAVVNVE+LERGFLINVF ERNSPGLLVRILEAFEKLGLEVLDADVSCSDCFQLQAVGEE                
Subjt:  ERKKAAASS--HQKSKEFRASTSSSAVVNVENLERGFLINVFLERNSPGLLVRILEAFEKLGLEVLDADVSCSDCFQLQAVGEEVRSLFQNITLKFESDQ

Query:  HKYRSSNEGTKIIKAQVVKNAVKQAIKEWSESNGQA
              NEGTKIIKAQVVKNAVKQAIKEWSESNGQA
Subjt:  HKYRSSNEGTKIIKAQVVKNAVKQAIKEWSESNGQA
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G40435.1 BEST Arabidopsis thaliana protein match is: transcription regulators (TAIR:AT3G56220.1)5.7e-1538.17Show/hide
Query:  ERKKAAASSHQKSKEFRASTSSSAVVNVENLERGFLINVFLERNSPGLLVRILEAFEKLGLEVLDADVSCSDCFQLQAVGEEVRSLFQNITLKFESDQHK
        ER     ++ Q S E   +   + +V VE L++GF+INVF  +N PG+LV +LEAFE +GL VL+A  SC+D F L A+G E                  
Subjt:  ERKKAAASSHQKSKEFRASTSSSAVVNVENLERGFLINVFLERNSPGLLVRILEAFEKLGLEVLDADVSCSDCFQLQAVGEEVRSLFQNITLKFESDQHK

Query:  YRSSNEGTKIIKAQVVKNAVKQAIKEWSESN
            NE  + + A+ VK AV  AI+ W E N
Subjt:  YRSSNEGTKIIKAQVVKNAVKQAIKEWSESN
AT3G56220.1 transcription regulators1.1e-1538.17Show/hide
Query:  ERKKAAASSHQKSKEFRASTSSSAVVNVENLERGFLINVFLERNSPGLLVRILEAFEKLGLEVLDADVSCSDCFQLQAVGEEVRSLFQNITLKFESDQHK
        E+   A +S Q    FR S+  + +V VE LE+GF+I V   +N  G+LV +LE FE LGL+V++A VSC+D F L A+G                    
Subjt:  ERKKAAASSHQKSKEFRASTSSSAVVNVENLERGFLINVFLERNSPGLLVRILEAFEKLGLEVLDADVSCSDCFQLQAVGEEVRSLFQNITLKFESDQHK

Query:  YRSSNEGTKIIKAQVVKNAVKQAIKEWSESN
          S+N+    I A+ VK AV +AI+ WS+S+
Subjt:  YRSSNEGTKIIKAQVVKNAVKQAIKEWSESN

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GGAAACTCGTGGTCTACTTTGTTTCAAGAAGCTCATCAAGAGAAAAGCAAGAACCTGTGGTGGCGCGTGGGCAGCGAGCGGCTGAGACACGGCGGCGTTTGCAAT
AAATTTTTCCGGTGGCCAGAGCGAAAGAAAGCCGCAGCTTCTTCTCATCAAAAGTCTAAAGAATTTCGTGCATCCACAAGCTCTAGTGCTGTAGTGAATGTGGAG
AATTTAGAGAGAGGTTTTCTTATAAATGTATTTTTGGAAAGAAATTCACCAGGATTGTTGGTTCGAATTCTAGAAGCCTTTGAGAAATTAGGGCTTGAAGTCCTC
GATGCTGACGTGTCTTGTTCTGATTGTTTCCAACTCCAAGCTGTTGGGGAAGAGGTCCGATCTCTCTTTCAAAATATTACATTAAAATTTGAAAGTGACCAACAT
AAATATAGATCATCAAATGAAGGGACAAAAATCATAAAGGCCCAAGTGGTGAAAAATGCAGTAAAGCAAGCAATCAAGGAATGGAGTGAAAGTAATGGGCAAGCA
mRNA sequenceShow/hide mRNA sequence
GGAAACTCGTGGTCTACTTTGTTTCAAGAAGCTCATCAAGAGAAAAGCAAGAACCTGTGGTGGCGCGTGGGCAGCGAGCGGCTGAGACACGGCGGCGTTTGCAAT
AAATTTTTCCGGTGGCCAGAGCGAAAGAAAGCCGCAGCTTCTTCTCATCAAAAGTCTAAAGAATTTCGTGCATCCACAAGCTCTAGTGCTGTAGTGAATGTGGAG
AATTTAGAGAGAGGTTTTCTTATAAATGTATTTTTGGAAAGAAATTCACCAGGATTGTTGGTTCGAATTCTAGAAGCCTTTGAGAAATTAGGGCTTGAAGTCCTC
GATGCTGACGTGTCTTGTTCTGATTGTTTCCAACTCCAAGCTGTTGGGGAAGAGGTCCGATCTCTCTTTCAAAATATTACATTAAAATTTGAAAGTGACCAACAT
AAATATAGATCATCAAATGAAGGGACAAAAATCATAAAGGCCCAAGTGGTGAAAAATGCAGTAAAGCAAGCAATCAAGGAATGGAGTGAAAGTAATGGGCAAGCA
Protein sequenceShow/hide protein sequence
GNSWSTLFQEAHQEKSKNLWWRVGSERLRHGGVCNKFFRWPERKKAAASSHQKSKEFRASTSSSAVVNVENLERGFLINVFLERNSPGLLVRILEAFEKLGLEVL
DADVSCSDCFQLQAVGEEVRSLFQNITLKFESDQHKYRSSNEGTKIIKAQVVKNAVKQAIKEWSESNGQA