; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CaUC04G072990 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC04G072990
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionXyloglucan endotransglucosylase/hydrolase
Genome locationCiama_Chr04:22134683..22135076
RNA-Seq ExpressionCaUC04G072990
SyntenyCaUC04G072990
Gene Ontology termsGO:0010411 - xyloglucan metabolic process (biological process)
GO:0042546 - cell wall biogenesis (biological process)
GO:0005576 - extracellular region (cellular component)
GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds (molecular function)
GO:0016762 - xyloglucan:xyloglucosyl transferase activity (molecular function)
InterPro domainsIPR000757 - Glycoside hydrolase family 16
IPR013320 - Concanavalin A-like lectin/glucanase domain superfamily
IPR044791 - Beta-glucanase/XTH


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CCH26636.1 putative xyloglucan endotransglucosylase/hydrolase [Cucumis sativus]3.2e-5177.12Show/hide
Query:  IFFVDGIPIRVYKNLTSIGARYPSQVMMVEGSIWNGEAWASQGKKVDWSQAPFQANYKGFGILGCTFGNQCDSETFSWNRRDKWELNPKQQQTYEDVKRK
        +FFVD +PIRV+KNLTSIG RYPSQ M+V+GSIWNGE WAS G+KVDWSQAPFQANYK FGILGC  GNQCDS+T  WN +DKWELNPKQQ  YE+VKRK
Subjt:  IFFVDGIPIRVYKNLTSIGARYPSQVMMVEGSIWNGEAWASQGKKVDWSQAPFQANYKGFGILGCTFGNQCDSETFSWNRRDKWELNPKQQQTYEDVKRK

Query:  YVYDTYCSTPRGRQYKEC
        YVYDTYC +PRG+ Y+EC
Subjt:  YVYDTYCSTPRGRQYKEC

KAG7023744.1 putative xyloglucan endotransglucosylase/hydrolase protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma]1.8e-4675Show/hide
Query:  IFFVDGIPIRVYKNLTSIGARYPSQVMMVEGSIWNGEAWASQGKKVDWSQAPFQANYKGFGILGCTFGNQCDSETFSWNRRDKWELNPKQQQTYEDVKRK
        +FFVD IPIRV+KN TSIG RYPSQ M+V GSIWNGEAWAS GKKVDWSQAPFQANYKGF ILGC FGN+CDSE   WN   +W+LNP+QQ+ YEDVKR 
Subjt:  IFFVDGIPIRVYKNLTSIGARYPSQVMMVEGSIWNGEAWASQGKKVDWSQAPFQANYKGFGILGCTFGNQCDSETFSWNRRDKWELNPKQQQTYEDVKRK

Query:  YVYDTYCSTPRGRQ-YKECQ
        YVY  YCS P GR+ YKECQ
Subjt:  YVYDTYCSTPRGRQ-YKECQ

XP_022961348.1 xyloglucan endotransglucosylase/hydrolase protein 2-like [Cucurbita moschata]1.8e-4675Show/hide
Query:  IFFVDGIPIRVYKNLTSIGARYPSQVMMVEGSIWNGEAWASQGKKVDWSQAPFQANYKGFGILGCTFGNQCDSETFSWNRRDKWELNPKQQQTYEDVKRK
        +FFVD IPIRV+KN TSIG RYPSQ M+V GSIWNGEAWAS GKKVDWSQAPFQANYKGF ILGC FGN+CDSE   WN   +W+LNP+QQ+ YEDVKR 
Subjt:  IFFVDGIPIRVYKNLTSIGARYPSQVMMVEGSIWNGEAWASQGKKVDWSQAPFQANYKGFGILGCTFGNQCDSETFSWNRRDKWELNPKQQQTYEDVKRK

Query:  YVYDTYCSTPRGRQ-YKECQ
        YVY  YCS P GR+ YKECQ
Subjt:  YVYDTYCSTPRGRQ-YKECQ

XP_022987397.1 xyloglucan endotransglucosylase/hydrolase protein 2-like [Cucurbita maxima]1.8e-4675Show/hide
Query:  IFFVDGIPIRVYKNLTSIGARYPSQVMMVEGSIWNGEAWASQGKKVDWSQAPFQANYKGFGILGCTFGNQCDSETFSWNRRDKWELNPKQQQTYEDVKRK
        +FFVD IPIRV+KN TSIG RYPSQ M+V GSIWNGEAWAS GKKVDWSQAPFQANYKGF ILGC FGN+CDSE   WN   +W+LNP+QQ+ YEDVKR 
Subjt:  IFFVDGIPIRVYKNLTSIGARYPSQVMMVEGSIWNGEAWASQGKKVDWSQAPFQANYKGFGILGCTFGNQCDSETFSWNRRDKWELNPKQQQTYEDVKRK

Query:  YVYDTYCSTPRGRQ-YKECQ
        YVY  YCS P GR+ YKECQ
Subjt:  YVYDTYCSTPRGRQ-YKECQ

XP_031740431.1 xyloglucan endotransglucosylase/hydrolase protein 2-like [Cucumis sativus]3.2e-5177.12Show/hide
Query:  IFFVDGIPIRVYKNLTSIGARYPSQVMMVEGSIWNGEAWASQGKKVDWSQAPFQANYKGFGILGCTFGNQCDSETFSWNRRDKWELNPKQQQTYEDVKRK
        +FFVD +PIRV+KNLTSIG RYPSQ M+V+GSIWNGE WAS G+KVDWSQAPFQANYK FGILGC  GNQCDS+T  WN +DKWELNPKQQ  YE+VKRK
Subjt:  IFFVDGIPIRVYKNLTSIGARYPSQVMMVEGSIWNGEAWASQGKKVDWSQAPFQANYKGFGILGCTFGNQCDSETFSWNRRDKWELNPKQQQTYEDVKRK

Query:  YVYDTYCSTPRGRQYKEC
        YVYDTYC +PRG+ Y+EC
Subjt:  YVYDTYCSTPRGRQYKEC

TrEMBL top hitse value%identityAlignment
A0A0A0KXI7 GH16 domain-containing protein1.6e-5177.12Show/hide
Query:  IFFVDGIPIRVYKNLTSIGARYPSQVMMVEGSIWNGEAWASQGKKVDWSQAPFQANYKGFGILGCTFGNQCDSETFSWNRRDKWELNPKQQQTYEDVKRK
        +FFVD +PIRV+KNLTSIG RYPSQ M+V+GSIWNGE WAS G+KVDWSQAPFQANYK FGILGC  GNQCDS+T  WN +DKWELNPKQQ  YE+VKRK
Subjt:  IFFVDGIPIRVYKNLTSIGARYPSQVMMVEGSIWNGEAWASQGKKVDWSQAPFQANYKGFGILGCTFGNQCDSETFSWNRRDKWELNPKQQQTYEDVKRK

Query:  YVYDTYCSTPRGRQYKEC
        YVYDTYC +PRG+ Y+EC
Subjt:  YVYDTYCSTPRGRQYKEC

A0A6J1HBJ0 xyloglucan endotransglucosylase/hydrolase protein 2-like8.8e-4775Show/hide
Query:  IFFVDGIPIRVYKNLTSIGARYPSQVMMVEGSIWNGEAWASQGKKVDWSQAPFQANYKGFGILGCTFGNQCDSETFSWNRRDKWELNPKQQQTYEDVKRK
        +FFVD IPIRV+KN TSIG RYPSQ M+V GSIWNGEAWAS GKKVDWSQAPFQANYKGF ILGC FGN+CDSE   WN   +W+LNP+QQ+ YEDVKR 
Subjt:  IFFVDGIPIRVYKNLTSIGARYPSQVMMVEGSIWNGEAWASQGKKVDWSQAPFQANYKGFGILGCTFGNQCDSETFSWNRRDKWELNPKQQQTYEDVKRK

Query:  YVYDTYCSTPRGRQ-YKECQ
        YVY  YCS P GR+ YKECQ
Subjt:  YVYDTYCSTPRGRQ-YKECQ

A0A6J1JA91 xyloglucan endotransglucosylase/hydrolase protein 2-like8.8e-4775Show/hide
Query:  IFFVDGIPIRVYKNLTSIGARYPSQVMMVEGSIWNGEAWASQGKKVDWSQAPFQANYKGFGILGCTFGNQCDSETFSWNRRDKWELNPKQQQTYEDVKRK
        +FFVD IPIRV+KN TSIG RYPSQ M+V GSIWNGEAWAS GKKVDWSQAPFQANYKGF ILGC FGN+CDSE   WN   +W+LNP+QQ+ YEDVKR 
Subjt:  IFFVDGIPIRVYKNLTSIGARYPSQVMMVEGSIWNGEAWASQGKKVDWSQAPFQANYKGFGILGCTFGNQCDSETFSWNRRDKWELNPKQQQTYEDVKRK

Query:  YVYDTYCSTPRGRQ-YKECQ
        YVY  YCS P GR+ YKECQ
Subjt:  YVYDTYCSTPRGRQ-YKECQ

N0DX41 Putative xyloglucan endotransglucosylase/hydrolase1.6e-5177.12Show/hide
Query:  IFFVDGIPIRVYKNLTSIGARYPSQVMMVEGSIWNGEAWASQGKKVDWSQAPFQANYKGFGILGCTFGNQCDSETFSWNRRDKWELNPKQQQTYEDVKRK
        +FFVD +PIRV+KNLTSIG RYPSQ M+V+GSIWNGE WAS G+KVDWSQAPFQANYK FGILGC  GNQCDS+T  WN +DKWELNPKQQ  YE+VKRK
Subjt:  IFFVDGIPIRVYKNLTSIGARYPSQVMMVEGSIWNGEAWASQGKKVDWSQAPFQANYKGFGILGCTFGNQCDSETFSWNRRDKWELNPKQQQTYEDVKRK

Query:  YVYDTYCSTPRGRQYKEC
        YVYDTYC +PRG+ Y+EC
Subjt:  YVYDTYCSTPRGRQYKEC

N0DX90 Putative xyloglucan endotransglucosylase/hydrolase3.6e-4064.17Show/hide
Query:  IFFVDGIPIRVYKNLTSIGARYPSQVMMVEGSIWNGEAWASQGKKVDWSQAPFQANYKGFGILGCTFGNQCDSETFSWNRRDKWELNPKQQQTYEDVKRK
        +F +DGIPIRV+KN TS+G RYPS  M V GSIWNGEAWAS GKKVDWSQ PFQA+Y+GF ILGC  G+ CDS++F WN+ + W+LNP Q++ Y+ +K K
Subjt:  IFFVDGIPIRVYKNLTSIGARYPSQVMMVEGSIWNGEAWASQGKKVDWSQAPFQANYKGFGILGCTFGNQCDSETFSWNRRDKWELNPKQQQTYEDVKRK

Query:  YVYDTYCSTPRGRQ-YKECQ
        Y+Y TYCS P   Q YKECQ
Subjt:  YVYDTYCSTPRGRQ-YKECQ

SwissProt top hitse value%identityAlignment
Q39857 Xyloglucan endotransglucosylase/hydrolase 17.8e-1639.13Show/hide
Query:  IFFVDGIPIRVYKNLTSIGARYP-SQVMMVEGSIWNGEAWASQG--KKVDWSQAPFQANYKGFGILGC---TFGNQCDSETFS-WNRRDKWELNPKQQQT
        +FFVD +PIRV+KN   +G ++P  Q M +  S+WN + WA++G  +K DWS+APF A YKGF I GC        CD++    W++ +  +L+  Q + 
Subjt:  IFFVDGIPIRVYKNLTSIGARYP-SQVMMVEGSIWNGEAWASQG--KKVDWSQAPFQANYKGFGILGC---TFGNQCDSETFS-WNRRDKWELNPKQQQT

Query:  YEDVKRKYVYDTYCS
           V++KY    YC+
Subjt:  YEDVKRKYVYDTYCS

Q41638 Xyloglucan endotransglucosylase/hydrolase protein A5.9e-1639.13Show/hide
Query:  IFFVDGIPIRVYKNLTSIGARYP-SQVMMVEGSIWNGEAWASQG--KKVDWSQAPFQANYKGFGILGC---TFGNQCDSETFS-WNRRDKWELNPKQQQT
        +F+VD  PIRV+KN   +G ++P +Q M +  S+WN + WA++G  +K DWS+APF A+YKGF I GC        CD++    W++ +  +L+  Q Q 
Subjt:  IFFVDGIPIRVYKNLTSIGARYP-SQVMMVEGSIWNGEAWASQG--KKVDWSQAPFQANYKGFGILGC---TFGNQCDSETFS-WNRRDKWELNPKQQQT

Query:  YEDVKRKYVYDTYCS
           V+ KY    YC+
Subjt:  YEDVKRKYVYDTYCS

Q9LJR7 Xyloglucan endotransglucosylase/hydrolase protein 35.2e-2041.38Show/hide
Query:  IFFVDGIPIRVYKNLTSIGARYPSQVMMVEGSIWNGEAWASQG--KKVDWSQAPFQANYKGFGILGCTFGNQ------CDSETFSWNRRDKWELNPKQQQ
        +F+VD IPIRVYKN    G  YPS+ M VE S+WNG+ WA+ G   KV+WS +PF A+++ F + GC    +      C+S  + WN  +   L+  +Q+
Subjt:  IFFVDGIPIRVYKNLTSIGARYPSQVMMVEGSIWNGEAWASQG--KKVDWSQAPFQANYKGFGILGCTFGNQ------CDSETFSWNRRDKWELNPKQQQ

Query:  TYEDVKRKYVYDTYCS
         YE V+ KY+   YC+
Subjt:  TYEDVKRKYVYDTYCS

Q9SV60 Xyloglucan endotransglucosylase/hydrolase protein 22.1e-2141.38Show/hide
Query:  IFFVDGIPIRVYKNLTSIGARYPSQVMMVEGSIWNGEAWASQG--KKVDWSQAPFQANYKGFGILGCTFGNQ------CDSETFSWNRRDKWELNPKQQQ
        +F+VD +PIRV+KN+   G  YPS+ M +  S+WNGE WA+ G  +K++W+ APF+A Y+GF   GC    Q      C S  + WN R   +L+  +Q+
Subjt:  IFFVDGIPIRVYKNLTSIGARYPSQVMMVEGSIWNGEAWASQG--KKVDWSQAPFQANYKGFGILGCTFGNQ------CDSETFSWNRRDKWELNPKQQQ

Query:  TYEDVKRKYVYDTYCS
          E+V+ KY+   YCS
Subjt:  TYEDVKRKYVYDTYCS

Q9SV61 Putative xyloglucan endotransglucosylase/hydrolase protein 14.2e-2244.25Show/hide
Query:  IFFVDGIPIRVYKNLTSIGARYPSQVMMVEGSIWNGEAWASQG--KKVDWSQAPFQANYKGFGILGCTFG---NQCDSETFSWNRRDKWELNPKQQQTYE
        + +VD IP+RV+KN TS G  YPS+ M V  S+WNGE WA+ G   K++WS APF+AN++GF   GC      N C S  + WN     +L+  +Q+ Y 
Subjt:  IFFVDGIPIRVYKNLTSIGARYPSQVMMVEGSIWNGEAWASQG--KKVDWSQAPFQANYKGFGILGCTFG---NQCDSETFSWNRRDKWELNPKQQQTYE

Query:  DVKRKYVYDTYCS
        +V++KY+   YCS
Subjt:  DVKRKYVYDTYCS

Arabidopsis top hitse value%identityAlignment
AT2G06850.1 xyloglucan endotransglucosylase/hydrolase 43.6e-1636.52Show/hide
Query:  IFFVDGIPIRVYKNLTSIGARYP-SQVMMVEGSIWNGEAWASQG--KKVDWSQAPFQANYKGFGILGC---TFGNQCDSE-TFSWNRRDKWELNPKQQQT
        +FFVD IPIR +KN   +G R+P +Q M +  S+WN + WA++G  +K +W+ APF A+YKGF I GC        C ++    W++++  +L+ +Q + 
Subjt:  IFFVDGIPIRVYKNLTSIGARYP-SQVMMVEGSIWNGEAWASQG--KKVDWSQAPFQANYKGFGILGC---TFGNQCDSE-TFSWNRRDKWELNPKQQQT

Query:  YEDVKRKYVYDTYCS
         + V+ K+    YC+
Subjt:  YEDVKRKYVYDTYCS

AT3G25050.1 xyloglucan endotransglucosylase/hydrolase 33.7e-2141.38Show/hide
Query:  IFFVDGIPIRVYKNLTSIGARYPSQVMMVEGSIWNGEAWASQG--KKVDWSQAPFQANYKGFGILGCTFGNQ------CDSETFSWNRRDKWELNPKQQQ
        +F+VD IPIRVYKN    G  YPS+ M VE S+WNG+ WA+ G   KV+WS +PF A+++ F + GC    +      C+S  + WN  +   L+  +Q+
Subjt:  IFFVDGIPIRVYKNLTSIGARYPSQVMMVEGSIWNGEAWASQG--KKVDWSQAPFQANYKGFGILGCTFGNQ------CDSETFSWNRRDKWELNPKQQQ

Query:  TYEDVKRKYVYDTYCS
         YE V+ KY+   YC+
Subjt:  TYEDVKRKYVYDTYCS

AT4G13080.1 xyloglucan endotransglucosylase/hydrolase 13.0e-2344.25Show/hide
Query:  IFFVDGIPIRVYKNLTSIGARYPSQVMMVEGSIWNGEAWASQG--KKVDWSQAPFQANYKGFGILGCTFG---NQCDSETFSWNRRDKWELNPKQQQTYE
        + +VD IP+RV+KN TS G  YPS+ M V  S+WNGE WA+ G   K++WS APF+AN++GF   GC      N C S  + WN     +L+  +Q+ Y 
Subjt:  IFFVDGIPIRVYKNLTSIGARYPSQVMMVEGSIWNGEAWASQG--KKVDWSQAPFQANYKGFGILGCTFG---NQCDSETFSWNRRDKWELNPKQQQTYE

Query:  DVKRKYVYDTYCS
        +V++KY+   YCS
Subjt:  DVKRKYVYDTYCS

AT4G13090.1 xyloglucan endotransglucosylase/hydrolase 21.5e-2241.38Show/hide
Query:  IFFVDGIPIRVYKNLTSIGARYPSQVMMVEGSIWNGEAWASQG--KKVDWSQAPFQANYKGFGILGCTFGNQ------CDSETFSWNRRDKWELNPKQQQ
        +F+VD +PIRV+KN+   G  YPS+ M +  S+WNGE WA+ G  +K++W+ APF+A Y+GF   GC    Q      C S  + WN R   +L+  +Q+
Subjt:  IFFVDGIPIRVYKNLTSIGARYPSQVMMVEGSIWNGEAWASQG--KKVDWSQAPFQANYKGFGILGCTFGNQ------CDSETFSWNRRDKWELNPKQQQ

Query:  TYEDVKRKYVYDTYCS
          E+V+ KY+   YCS
Subjt:  TYEDVKRKYVYDTYCS

AT4G30280.1 xyloglucan endotransglucosylase/hydrolase 184.7e-1639.32Show/hide
Query:  IFFVDGIPIRVYKNLTSIGARYPS-QVMMVEGSIWNGEAWASQG--KKVDWSQAPFQANYKGFGILGCTFGN---QCDSETFSWNRRDKWELNPKQQQTY
        IF VDGIPIR +KN  SIG  +P+ Q M +  S+W  E WA++G  +K DWS+APF A Y+ + + GC + N    C + + SW  +   +L+   Q   
Subjt:  IFFVDGIPIRVYKNLTSIGARYPS-QVMMVEGSIWNGEAWASQG--KKVDWSQAPFQANYKGFGILGCTFGN---QCDSETFSWNRRDKWELNPKQQQTY

Query:  EDVKRKYVYDTYCSTPR
        + V+ KY+   YC+  R
Subjt:  EDVKRKYVYDTYCSTPR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAATATTCTTTGTGGATGGAATTCCAATAAGGGTGTATAAAAACCTAACATCAATTGGGGCAAGATACCCATCACAAGTAATGATGGTGGAGGGAAGCATATGGAA
TGGAGAAGCATGGGCATCACAAGGCAAGAAAGTAGATTGGTCTCAAGCTCCATTTCAAGCAAATTACAAAGGCTTTGGCATTCTTGGTTGCACATTTGGAAACCAATGTG
ACTCAGAGACATTTTCATGGAACAGAAGAGATAAGTGGGAATTGAATCCCAAACAACAACAAACTTATGAGGATGTGAAGAGAAAATATGTATATGATACCTATTGTTCA
ACTCCAAGGGGTAGGCAATATAAAGAATGCCAAGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAATATTCTTTGTGGATGGAATTCCAATAAGGGTGTATAAAAACCTAACATCAATTGGGGCAAGATACCCATCACAAGTAATGATGGTGGAGGGAAGCATATGGAA
TGGAGAAGCATGGGCATCACAAGGCAAGAAAGTAGATTGGTCTCAAGCTCCATTTCAAGCAAATTACAAAGGCTTTGGCATTCTTGGTTGCACATTTGGAAACCAATGTG
ACTCAGAGACATTTTCATGGAACAGAAGAGATAAGTGGGAATTGAATCCCAAACAACAACAAACTTATGAGGATGTGAAGAGAAAATATGTATATGATACCTATTGTTCA
ACTCCAAGGGGTAGGCAATATAAAGAATGCCAAGTTTGA
Protein sequenceShow/hide protein sequence
MEIFFVDGIPIRVYKNLTSIGARYPSQVMMVEGSIWNGEAWASQGKKVDWSQAPFQANYKGFGILGCTFGNQCDSETFSWNRRDKWELNPKQQQTYEDVKRKYVYDTYCS
TPRGRQYKECQV