; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CaUC04G073030 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC04G073030
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionChlorophyll a-b binding protein, chloroplastic
Genome locationCiama_Chr04:22160016..22163039
RNA-Seq ExpressionCaUC04G073030
SyntenyCaUC04G073030
Gene Ontology termsGO:0009416 - response to light stimulus (biological process)
GO:0009768 - photosynthesis, light harvesting in photosystem I (biological process)
GO:0018298 - protein-chromophore linkage (biological process)
GO:0009522 - photosystem I (cellular component)
GO:0009523 - photosystem II (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016168 - chlorophyll binding (molecular function)
InterPro domainsIPR001344 - Chlorophyll A-B binding protein, plant and chromista
IPR022796 - Chlorophyll A-B binding protein
IPR023329 - Chlorophyll a/b binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004147887.1 chlorophyll a-b binding protein CP29.1, chloroplastic [Cucumis sativus]7.5e-15596.48Show/hide
Query:  MATAAATSSFIGTRLAELRPSSGRVQARFGFGKKKTPAKKSPSSKTISNRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNV
        MATAAATSSF+GTRLAE+ PSSGRVQARFGFGKKK+P KKSPSSK IS+RPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNV
Subjt:  MATAAATSSFIGTRLAELRPSSGRVQARFGFGKKKTPAKKSPSSKTISNRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNV

Query:  AGDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEGLTGVTWQDAGKVELVEGSSYLGQPLPFSLTTLIWIEVLVIGYIEFQ
        AGDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVE LTGVTWQDAGKVELVEGSSYLGQPLPFS+TTLIWIEVLVIGYIEFQ
Subjt:  AGDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEGLTGVTWQDAGKVELVEGSSYLGQPLPFSLTTLIWIEVLVIGYIEFQ

Query:  RNAELDPEKRLYPGGKYFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS
        RNAELDPEKRLYPGGK+FDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS
Subjt:  RNAELDPEKRLYPGGKYFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS

XP_008449241.1 PREDICTED: chlorophyll a-b binding protein CP29.1, chloroplastic-like [Cucumis melo]4.4e-15597.18Show/hide
Query:  MATAAATSSFIGTRLAELRPSSGRVQARFGFGKKKTPAKKSPSSKTISNRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNV
        MATAAATSSFIGTRLAE+ PSSGRVQARFGFGKKK+P KKSPSSK IS+RPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNV
Subjt:  MATAAATSSFIGTRLAELRPSSGRVQARFGFGKKKTPAKKSPSSKTISNRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNV

Query:  AGDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEGLTGVTWQDAGKVELVEGSSYLGQPLPFSLTTLIWIEVLVIGYIEFQ
        AGDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVE LTGVTWQDAGKVELVEGSSYLGQPLPFSLTTLIWIEVLVIGYIEFQ
Subjt:  AGDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEGLTGVTWQDAGKVELVEGSSYLGQPLPFSLTTLIWIEVLVIGYIEFQ

Query:  RNAELDPEKRLYPGGKYFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS
        RNAELDPEKRLYPGGK+FDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS
Subjt:  RNAELDPEKRLYPGGKYFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS

XP_022950626.1 chlorophyll a-b binding protein CP29.1, chloroplastic-like [Cucurbita moschata]7.5e-15596.11Show/hide
Query:  ATAAATSSFIGTRLAELRPSSGRVQARFGFGKKKTPAKKSPSSKTISNRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVA
        ATAAATSSFIGTRL ++RPSS RVQARFGFGKKK PAKKSPSSKTIS+RPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVA
Subjt:  ATAAATSSFIGTRLAELRPSSGRVQARFGFGKKKTPAKKSPSSKTISNRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVA

Query:  GDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEGLTGVTWQDAGKVELVEGSSYLGQPLPFSLTTLIWIEVLVIGYIEFQR
        GDIIGTRFESA+VKSTPFQPY+EVFGLQRFRECELIHGRWAMLATLGAL+VEGLTG+TWQDAGKVELVEGSSYLGQPLPFSLTTLIWIEVLVIGYIEFQR
Subjt:  GDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEGLTGVTWQDAGKVELVEGSSYLGQPLPFSLTTLIWIEVLVIGYIEFQR

Query:  NAELDPEKRLYPGGKYFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS
        NAELDPEKRLYPGGK+FDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS
Subjt:  NAELDPEKRLYPGGKYFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS

XP_022978220.1 chlorophyll a-b binding protein CP29.1, chloroplastic-like [Cucurbita maxima]3.4e-15596.11Show/hide
Query:  ATAAATSSFIGTRLAELRPSSGRVQARFGFGKKKTPAKKSPSSKTISNRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVA
        ATAAATSSFIGTRL ++RPSSGRVQARFGFGKKK PAKKSPSSKTIS+RPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVA
Subjt:  ATAAATSSFIGTRLAELRPSSGRVQARFGFGKKKTPAKKSPSSKTISNRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVA

Query:  GDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEGLTGVTWQDAGKVELVEGSSYLGQPLPFSLTTLIWIEVLVIGYIEFQR
        GDIIGTRFE+A+VKSTPFQPY+EVFGLQRFRECELIHGRWAMLATLGAL+VEGLTG+TWQDAGKVELVEGSSYLGQPLPFSLTTLIWIEVLVIGYIEFQR
Subjt:  GDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEGLTGVTWQDAGKVELVEGSSYLGQPLPFSLTTLIWIEVLVIGYIEFQR

Query:  NAELDPEKRLYPGGKYFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS
        NAELDPEKRLYPGGK+FDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS
Subjt:  NAELDPEKRLYPGGKYFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS

XP_038882769.1 chlorophyll a-b binding protein CP29.1, chloroplastic-like [Benincasa hispida]8.9e-15697.18Show/hide
Query:  MATAAATSSFIGTRLAELRPSSGRVQARFGFGKKKTPAKKSPSSKTISNRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNV
        MATAAATSSFIGTRLAELRP SGRVQARFGFGKKK+P KKSPSSKTIS+RPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNV
Subjt:  MATAAATSSFIGTRLAELRPSSGRVQARFGFGKKKTPAKKSPSSKTISNRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNV

Query:  AGDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEGLTGVTWQDAGKVELVEGSSYLGQPLPFSLTTLIWIEVLVIGYIEFQ
        AGDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVE LTGVTWQDAGKVELVEGSSYLGQPLPFS+TTLIWIEVLVIGYIEFQ
Subjt:  AGDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEGLTGVTWQDAGKVELVEGSSYLGQPLPFSLTTLIWIEVLVIGYIEFQ

Query:  RNAELDPEKRLYPGGKYFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS
        RNAELDPEKRLYPGGK+FDPLGLAEDPEKK VLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS
Subjt:  RNAELDPEKRLYPGGKYFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS

TrEMBL top hitse value%identityAlignment
A0A0A0KXI3 Chlorophyll a-b binding protein, chloroplastic3.6e-15596.48Show/hide
Query:  MATAAATSSFIGTRLAELRPSSGRVQARFGFGKKKTPAKKSPSSKTISNRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNV
        MATAAATSSF+GTRLAE+ PSSGRVQARFGFGKKK+P KKSPSSK IS+RPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNV
Subjt:  MATAAATSSFIGTRLAELRPSSGRVQARFGFGKKKTPAKKSPSSKTISNRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNV

Query:  AGDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEGLTGVTWQDAGKVELVEGSSYLGQPLPFSLTTLIWIEVLVIGYIEFQ
        AGDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVE LTGVTWQDAGKVELVEGSSYLGQPLPFS+TTLIWIEVLVIGYIEFQ
Subjt:  AGDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEGLTGVTWQDAGKVELVEGSSYLGQPLPFSLTTLIWIEVLVIGYIEFQ

Query:  RNAELDPEKRLYPGGKYFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS
        RNAELDPEKRLYPGGK+FDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS
Subjt:  RNAELDPEKRLYPGGKYFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS

A0A1S3BMH8 Chlorophyll a-b binding protein, chloroplastic2.1e-15597.18Show/hide
Query:  MATAAATSSFIGTRLAELRPSSGRVQARFGFGKKKTPAKKSPSSKTISNRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNV
        MATAAATSSFIGTRLAE+ PSSGRVQARFGFGKKK+P KKSPSSK IS+RPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNV
Subjt:  MATAAATSSFIGTRLAELRPSSGRVQARFGFGKKKTPAKKSPSSKTISNRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNV

Query:  AGDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEGLTGVTWQDAGKVELVEGSSYLGQPLPFSLTTLIWIEVLVIGYIEFQ
        AGDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVE LTGVTWQDAGKVELVEGSSYLGQPLPFSLTTLIWIEVLVIGYIEFQ
Subjt:  AGDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEGLTGVTWQDAGKVELVEGSSYLGQPLPFSLTTLIWIEVLVIGYIEFQ

Query:  RNAELDPEKRLYPGGKYFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS
        RNAELDPEKRLYPGGK+FDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS
Subjt:  RNAELDPEKRLYPGGKYFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS

A0A5D3BBB3 Chlorophyll a-b binding protein, chloroplastic2.1e-15597.18Show/hide
Query:  MATAAATSSFIGTRLAELRPSSGRVQARFGFGKKKTPAKKSPSSKTISNRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNV
        MATAAATSSFIGTRLAE+ PSSGRVQARFGFGKKK+P KKSPSSK IS+RPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNV
Subjt:  MATAAATSSFIGTRLAELRPSSGRVQARFGFGKKKTPAKKSPSSKTISNRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNV

Query:  AGDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEGLTGVTWQDAGKVELVEGSSYLGQPLPFSLTTLIWIEVLVIGYIEFQ
        AGDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVE LTGVTWQDAGKVELVEGSSYLGQPLPFSLTTLIWIEVLVIGYIEFQ
Subjt:  AGDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEGLTGVTWQDAGKVELVEGSSYLGQPLPFSLTTLIWIEVLVIGYIEFQ

Query:  RNAELDPEKRLYPGGKYFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS
        RNAELDPEKRLYPGGK+FDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS
Subjt:  RNAELDPEKRLYPGGKYFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS

A0A6J1GFC4 Chlorophyll a-b binding protein, chloroplastic3.6e-15596.11Show/hide
Query:  ATAAATSSFIGTRLAELRPSSGRVQARFGFGKKKTPAKKSPSSKTISNRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVA
        ATAAATSSFIGTRL ++RPSS RVQARFGFGKKK PAKKSPSSKTIS+RPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVA
Subjt:  ATAAATSSFIGTRLAELRPSSGRVQARFGFGKKKTPAKKSPSSKTISNRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVA

Query:  GDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEGLTGVTWQDAGKVELVEGSSYLGQPLPFSLTTLIWIEVLVIGYIEFQR
        GDIIGTRFESA+VKSTPFQPY+EVFGLQRFRECELIHGRWAMLATLGAL+VEGLTG+TWQDAGKVELVEGSSYLGQPLPFSLTTLIWIEVLVIGYIEFQR
Subjt:  GDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEGLTGVTWQDAGKVELVEGSSYLGQPLPFSLTTLIWIEVLVIGYIEFQR

Query:  NAELDPEKRLYPGGKYFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS
        NAELDPEKRLYPGGK+FDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS
Subjt:  NAELDPEKRLYPGGKYFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS

A0A6J1IPG0 Chlorophyll a-b binding protein, chloroplastic1.6e-15596.11Show/hide
Query:  ATAAATSSFIGTRLAELRPSSGRVQARFGFGKKKTPAKKSPSSKTISNRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVA
        ATAAATSSFIGTRL ++RPSSGRVQARFGFGKKK PAKKSPSSKTIS+RPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVA
Subjt:  ATAAATSSFIGTRLAELRPSSGRVQARFGFGKKKTPAKKSPSSKTISNRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVA

Query:  GDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEGLTGVTWQDAGKVELVEGSSYLGQPLPFSLTTLIWIEVLVIGYIEFQR
        GDIIGTRFE+A+VKSTPFQPY+EVFGLQRFRECELIHGRWAMLATLGAL+VEGLTG+TWQDAGKVELVEGSSYLGQPLPFSLTTLIWIEVLVIGYIEFQR
Subjt:  GDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEGLTGVTWQDAGKVELVEGSSYLGQPLPFSLTTLIWIEVLVIGYIEFQR

Query:  NAELDPEKRLYPGGKYFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS
        NAELDPEKRLYPGGK+FDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS
Subjt:  NAELDPEKRLYPGGKYFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS

SwissProt top hitse value%identityAlignment
Q01667 Chlorophyll a-b binding protein 6, chloroplastic7.1e-3942.06Show/hide
Query:  WFPGAKAPEWLDGSLVGDYGFDPFGLGK-PAEYLQYDLDSLDQNLAKNVAGDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALS
        W PG   P +LDGS  GD+GFDP GLG+ PA                                             L+R++E ELIH RWAMLA  G L 
Subjt:  WFPGAKAPEWLDGSLVGDYGFDPFGLGK-PAEYLQYDLDSLDQNLAKNVAGDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALS

Query:  VEGLTGVTWQDAGKVELVEG--SSYLGQPLPF-SLTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKYFDPLGLAEDPEKKAVLQLAEIKHARLAMVAF
         E L    W  A +   + G  ++YLG P+P+ +L T++ IE L I ++E QR+ E DPEK+ YPGG  FDPLG ++DP+K   L++ EIK+ RLA++AF
Subjt:  VEGLTGVTWQDAGKVELVEG--SSYLGQPLPF-SLTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKYFDPLGLAEDPEKKAVLQLAEIKHARLAMVAF

Query:  LGFAV-QAAVTGKGPLNNWATHLSDPLHTTIID
        +GF V Q+A  G GPL N ATHL+DP H  I D
Subjt:  LGFAV-QAAVTGKGPLNNWATHLSDPLHTTIID

Q07473 Chlorophyll a-b binding protein CP29.1, chloroplastic1.8e-13582.81Show/hide
Query:  ATAAATSSFIGTRLAE-LRPSSGRVQARFGFGKKKTPAKKSPSSKTISNRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNV
        A AAA SS +GTR+A  + P SGR  A FGFGKKK   KKS      ++RPLW+PGA +P+WLDGSLVGDYGFDPFGLGKPAEYLQ+D+DSLDQNLAKN+
Subjt:  ATAAATSSFIGTRLAE-LRPSSGRVQARFGFGKKKTPAKKSPSSKTISNRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNV

Query:  AGDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEGLTGVTWQDAGKVELVEGSSYLGQPLPFSLTTLIWIEVLVIGYIEFQ
        AGD+IGTR E+A+ KSTPFQPY+EVFG+QRFRECELIHGRWAMLATLGALSVE LTGVTWQDAGKVELV+GSSYLGQPLPFS++TLIWIEVLVIGYIEFQ
Subjt:  AGDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEGLTGVTWQDAGKVELVEGSSYLGQPLPFSLTTLIWIEVLVIGYIEFQ

Query:  RNAELDPEKRLYPGGKYFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSSS
        RNAELD EKRLYPGGK+FDPLGLA DPEK A LQLAEIKHARLAMVAFLGFAVQAA TGKGPLNNWATHLSDPLHTTIID FSSS
Subjt:  RNAELDPEKRLYPGGKYFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSSS

Q93WD2 Chlorophyll a-b binding protein CP293.4e-6558.22Show/hide
Query:  LWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESAEVKSTP--------FQPYTEVFGLQRFRECELIHGRWAM
        LW P    PEWLDGSL GD GFDP GL KP+E++   +D  DQN AKN  G +       A V++TP          PY+EVFGL RFRECELIHGRWAM
Subjt:  LWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESAEVKSTP--------FQPYTEVFGLQRFRECELIHGRWAM

Query:  LATLGALSVEGLTGVTWQDAGKVELVEGSSYLGQPLPFSLTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKYFDPLGLAEDPEKKAV-LQLAEIKHAR
        LA LGAL  E  TGV+W +AGKVEL +G+SY G  LPFS+T LIWIEV+++G  EF RN+E +PEKR YPGG  FDPL LA + E++A  L+ AEIKHAR
Subjt:  LATLGALSVEGLTGVTWQDAGKVELVEGSSYLGQPLPFSLTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKYFDPLGLAEDPEKKAV-LQLAEIKHAR

Query:  LAMVAFLGFAVQAAVTGKGPLNNWA
        LAMV+F G+ VQA  TG+G L + A
Subjt:  LAMVAFLGFAVQAAVTGKGPLNNWA

Q9S7W1 Chlorophyll a-b binding protein CP29.3, chloroplastic3.9e-11476.3Show/hide
Query:  TAAATSSFIGTRLAELRPSSGRVQARFG--FGKKK--TPAKKSPSSKTISNRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAK
        TAAA S   G R+ + RP +GRVQARFG  FGKKK   P KKS   +   +R +WFPGA  PEWLDGS++GD GFDPFGLGKPAEYLQYD D LDQNLAK
Subjt:  TAAATSSFIGTRLAELRPSSGRVQARFG--FGKKK--TPAKKSPSSKTISNRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAK

Query:  NVAGDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEGLTGVTWQDAGKVELVEGSSYLGQPLPFSLTTLIWIEVLVIGYIE
        NVAGDIIG   ES+E+K TPFQPYTEVFG+QRFRECELIHGRWAML TLGA++VE LTG+ WQDAGKVELVEGSSYLGQPLPFSLTTLIWIEVLV+GYIE
Subjt:  NVAGDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEGLTGVTWQDAGKVELVEGSSYLGQPLPFSLTTLIWIEVLVIGYIE

Query:  FQRNAELDPEKRLYPGGKYFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWAT
        FQRN+ELDPEKR+YPGG YFDPLGLA DPEK   L+LAEIKH+RLAMVAFL FA+QAA TGKGP++  AT
Subjt:  FQRNAELDPEKRLYPGGKYFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWAT

Q9XF88 Chlorophyll a-b binding protein CP29.2, chloroplastic7.1e-13281.4Show/hide
Query:  ATAAATSSFIGTR-LAELRPSSGRVQARFGFGKKKTPAKKSPSSKTISNRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNV
        +TAAA SS +GTR ++++  +S R  ARFGFG KK   KK+ +   IS+RPLWFPGAK+PE+LDGSLVGDYGFDPFGLGKPAEYLQ+DLDSLDQNLAKN+
Subjt:  ATAAATSSFIGTR-LAELRPSSGRVQARFGFGKKKTPAKKSPSSKTISNRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNV

Query:  AGDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEGLTGVTWQDAGKVELVEGSSYLGQPLPFSLTTLIWIEVLVIGYIEFQ
         G++IGTR E+ + KSTPFQPY+EVFGLQRFRECELIHGRWAMLATLGA++VE LTGVTWQDAGKVELV+GSSYLGQPLPFS++TLIWIEVLVIGYIEFQ
Subjt:  AGDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEGLTGVTWQDAGKVELVEGSSYLGQPLPFSLTTLIWIEVLVIGYIEFQ

Query:  RNAELDPEKRLYPGGKYFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSSS
        RNAELD EKRLYPGGK+FDPLGLA DP KKA LQLAEIKHARLAMV FLGFAVQAA TGKGPLNNWATHLSDPLHTTIID FSSS
Subjt:  RNAELDPEKRLYPGGKYFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSSS

Arabidopsis top hitse value%identityAlignment
AT2G40100.1 light harvesting complex photosystem II2.8e-11576.3Show/hide
Query:  TAAATSSFIGTRLAELRPSSGRVQARFG--FGKKK--TPAKKSPSSKTISNRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAK
        TAAA S   G R+ + RP +GRVQARFG  FGKKK   P KKS   +   +R +WFPGA  PEWLDGS++GD GFDPFGLGKPAEYLQYD D LDQNLAK
Subjt:  TAAATSSFIGTRLAELRPSSGRVQARFG--FGKKK--TPAKKSPSSKTISNRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAK

Query:  NVAGDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEGLTGVTWQDAGKVELVEGSSYLGQPLPFSLTTLIWIEVLVIGYIE
        NVAGDIIG   ES+E+K TPFQPYTEVFG+QRFRECELIHGRWAML TLGA++VE LTG+ WQDAGKVELVEGSSYLGQPLPFSLTTLIWIEVLV+GYIE
Subjt:  NVAGDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEGLTGVTWQDAGKVELVEGSSYLGQPLPFSLTTLIWIEVLVIGYIE

Query:  FQRNAELDPEKRLYPGGKYFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWAT
        FQRN+ELDPEKR+YPGG YFDPLGLA DPEK   L+LAEIKH+RLAMVAFL FA+QAA TGKGP++  AT
Subjt:  FQRNAELDPEKRLYPGGKYFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWAT

AT2G40100.2 light harvesting complex photosystem II3.1e-6672.19Show/hide
Query:  TAAATSSFIGTRLAELRPSSGRVQARFG--FGKKK--TPAKKSPSSKTISNRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAK
        TAAA S   G R+ + RP +GRVQARFG  FGKKK   P KKS   +   +R +WFPGA  PEWLDGS++GD GFDPFGLGKPAEYLQYD D LDQNLAK
Subjt:  TAAATSSFIGTRLAELRPSSGRVQARFG--FGKKK--TPAKKSPSSKTISNRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAK

Query:  NVAGDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEGLTGVTWQDAGKVE
        NVAGDIIG   ES+E+K TPFQPYTEVFG+QRFRECELIHGRWAML TLGA++VE LTG+ WQDAGKVE
Subjt:  NVAGDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEGLTGVTWQDAGKVE

AT3G08940.1 light harvesting complex photosystem II1.5e-6871.27Show/hide
Query:  ATAAATSSFIGTR-LAELRPSSGRVQARFGFGKKKTPAKKSPSSKTISNRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNV
        +TAAA SS +GTR ++++  +S R  ARFGFG KK   KK+ +   IS+RPLWFPGAK+PE+LDGSLVGDYGFDPFGLGKPAEYLQ+DLDSLDQNLAKN+
Subjt:  ATAAATSSFIGTR-LAELRPSSGRVQARFGFGKKKTPAKKSPSSKTISNRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNV

Query:  AGDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEGLTGVTWQDAGKVELVEGSSYLGQPLPF
         G++IGTR E+ + KSTPFQPY+EVFGLQRFRECELIHGRWAMLATLGA++VE LTGVTWQDAGKV  +  SS L   L F
Subjt:  AGDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEGLTGVTWQDAGKVELVEGSSYLGQPLPF

AT3G08940.2 light harvesting complex photosystem II5.1e-13381.4Show/hide
Query:  ATAAATSSFIGTR-LAELRPSSGRVQARFGFGKKKTPAKKSPSSKTISNRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNV
        +TAAA SS +GTR ++++  +S R  ARFGFG KK   KK+ +   IS+RPLWFPGAK+PE+LDGSLVGDYGFDPFGLGKPAEYLQ+DLDSLDQNLAKN+
Subjt:  ATAAATSSFIGTR-LAELRPSSGRVQARFGFGKKKTPAKKSPSSKTISNRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNV

Query:  AGDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEGLTGVTWQDAGKVELVEGSSYLGQPLPFSLTTLIWIEVLVIGYIEFQ
         G++IGTR E+ + KSTPFQPY+EVFGLQRFRECELIHGRWAMLATLGA++VE LTGVTWQDAGKVELV+GSSYLGQPLPFS++TLIWIEVLVIGYIEFQ
Subjt:  AGDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEGLTGVTWQDAGKVELVEGSSYLGQPLPFSLTTLIWIEVLVIGYIEFQ

Query:  RNAELDPEKRLYPGGKYFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSSS
        RNAELD EKRLYPGGK+FDPLGLA DP KKA LQLAEIKHARLAMV FLGFAVQAA TGKGPLNNWATHLSDPLHTTIID FSSS
Subjt:  RNAELDPEKRLYPGGKYFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSSS

AT5G01530.1 light harvesting complex photosystem II1.3e-13682.81Show/hide
Query:  ATAAATSSFIGTRLAE-LRPSSGRVQARFGFGKKKTPAKKSPSSKTISNRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNV
        A AAA SS +GTR+A  + P SGR  A FGFGKKK   KKS      ++RPLW+PGA +P+WLDGSLVGDYGFDPFGLGKPAEYLQ+D+DSLDQNLAKN+
Subjt:  ATAAATSSFIGTRLAE-LRPSSGRVQARFGFGKKKTPAKKSPSSKTISNRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNV

Query:  AGDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEGLTGVTWQDAGKVELVEGSSYLGQPLPFSLTTLIWIEVLVIGYIEFQ
        AGD+IGTR E+A+ KSTPFQPY+EVFG+QRFRECELIHGRWAMLATLGALSVE LTGVTWQDAGKVELV+GSSYLGQPLPFS++TLIWIEVLVIGYIEFQ
Subjt:  AGDIIGTRFESAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEGLTGVTWQDAGKVELVEGSSYLGQPLPFSLTTLIWIEVLVIGYIEFQ

Query:  RNAELDPEKRLYPGGKYFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSSS
        RNAELD EKRLYPGGK+FDPLGLA DPEK A LQLAEIKHARLAMVAFLGFAVQAA TGKGPLNNWATHLSDPLHTTIID FSSS
Subjt:  RNAELDPEKRLYPGGKYFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSSS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCATACCTCAACCACAAACTTCGCAAACAAAATCGAGTGAACGACGACGCTTTGACCCCACCGTTCCAGTACGACGGGATAAGGCAGAGATAAGGCCAAGA
CGAACAGAAGCCGTCAGATGGATTCGTCCCATAATCCAACGGACACAAAACCACCACAACAGATTATGTGGCAATCGCCGATCACAATTCCCCTTTCTCAACCAC
ATAATAACCCAACCAAAATCCCTACTTCCATCTCACACTCTTCAATTCCTCTCTCAACTCCTCGTCGTCGTCGTCGTCGTCGTCGTAATGGCCACCGCTGCCGCA
ACCTCTTCCTTCATCGGAACACGCCTCGCCGAATTACGGCCGAGTTCCGGTCGAGTCCAAGCCCGATTCGGATTCGGGAAGAAGAAGACTCCGGCGAAGAAATCG
CCGTCGTCGAAGACGATATCCAACCGGCCGTTGTGGTTTCCGGGAGCAAAGGCGCCGGAATGGCTGGACGGAAGCTTGGTCGGGGACTACGGATTCGATCCGTTC
GGGTTGGGGAAACCGGCAGAATATTTGCAGTATGATTTGGACTCGTTGGACCAGAACTTGGCGAAGAATGTGGCGGGAGATATTATCGGGACGAGATTTGAGAGC
GCGGAAGTGAAATCGACCCCGTTTCAGCCGTACACGGAGGTTTTTGGATTGCAGAGATTCCGCGAGTGCGAGCTAATCCATGGAAGGTGGGCAATGCTTGCCACA
CTCGGTGCTCTCTCTGTTGAAGGGCTCACCGGTGTCACGTGGCAAGACGCCGGAAAAGTAGAACTAGTGGAAGGTTCATCCTACCTAGGGCAGCCACTTCCCTTC
TCCCTCACCACGCTGATTTGGATCGAAGTTCTAGTGATCGGTTACATCGAGTTTCAAAGGAATGCGGAGTTAGACCCAGAGAAGAGGTTGTATCCAGGAGGCAAG
TATTTCGACCCCTTGGGCTTAGCCGAGGACCCCGAAAAGAAAGCCGTCCTACAGTTGGCCGAGATCAAGCACGCTCGCCTAGCCATGGTTGCCTTCCTTGGGTTC
GCAGTTCAGGCTGCTGTTACTGGCAAAGGCCCACTCAACAACTGGGCTACCCATCTCAGTGACCCTCTCCACACCACTATTATTGACAACTTCTCTTCTTCTTCT
TCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGCATACCTCAACCACAAACTTCGCAAACAAAATCGAGTGAACGACGACGCTTTGACCCCACCGTTCCAGTACGACGGGATAAGGCAGAGATAAGGCCAAGA
CGAACAGAAGCCGTCAGATGGATTCGTCCCATAATCCAACGGACACAAAACCACCACAACAGATTATGTGGCAATCGCCGATCACAATTCCCCTTTCTCAACCAC
ATAATAACCCAACCAAAATCCCTACTTCCATCTCACACTCTTCAATTCCTCTCTCAACTCCTCGTCGTCGTCGTCGTCGTCGTCGTAATGGCCACCGCTGCCGCA
ACCTCTTCCTTCATCGGAACACGCCTCGCCGAATTACGGCCGAGTTCCGGTCGAGTCCAAGCCCGATTCGGATTCGGGAAGAAGAAGACTCCGGCGAAGAAATCG
CCGTCGTCGAAGACGATATCCAACCGGCCGTTGTGGTTTCCGGGAGCAAAGGCGCCGGAATGGCTGGACGGAAGCTTGGTCGGGGACTACGGATTCGATCCGTTC
GGGTTGGGGAAACCGGCAGAATATTTGCAGTATGATTTGGACTCGTTGGACCAGAACTTGGCGAAGAATGTGGCGGGAGATATTATCGGGACGAGATTTGAGAGC
GCGGAAGTGAAATCGACCCCGTTTCAGCCGTACACGGAGGTTTTTGGATTGCAGAGATTCCGCGAGTGCGAGCTAATCCATGGAAGGTGGGCAATGCTTGCCACA
CTCGGTGCTCTCTCTGTTGAAGGGCTCACCGGTGTCACGTGGCAAGACGCCGGAAAAGTAGAACTAGTGGAAGGTTCATCCTACCTAGGGCAGCCACTTCCCTTC
TCCCTCACCACGCTGATTTGGATCGAAGTTCTAGTGATCGGTTACATCGAGTTTCAAAGGAATGCGGAGTTAGACCCAGAGAAGAGGTTGTATCCAGGAGGCAAG
TATTTCGACCCCTTGGGCTTAGCCGAGGACCCCGAAAAGAAAGCCGTCCTACAGTTGGCCGAGATCAAGCACGCTCGCCTAGCCATGGTTGCCTTCCTTGGGTTC
GCAGTTCAGGCTGCTGTTACTGGCAAAGGCCCACTCAACAACTGGGCTACCCATCTCAGTGACCCTCTCCACACCACTATTATTGACAACTTCTCTTCTTCTTCT
TCTTAAGCTCCTCTTTATTTTCCTCCACTACTTTGTGTTCATTATTGTCTTCTCTCTAGTTTGTAAAAAAAGAACTTGACCTTGTAATGTCATCCTGAGCTGTAA
CTACTTTGCTTCGAGATTCGTATCTGAAATTATATATCCTGCTCCCCACACAAATCAAAACTGTTATTAGTTTAGTTTCCAAACTCTGTTCATTCTTTTTTTAAT
CATTATTAAGGTGATTCTATATTGCTTAA
Protein sequenceShow/hide protein sequence
MSIPQPQTSQTKSSERRRFDPTVPVRRDKAEIRPRRTEAVRWIRPIIQRTQNHHNRLCGNRRSQFPFLNHIITQPKSLLPSHTLQFLSQLLVVVVVVVVMATAAA
TSSFIGTRLAELRPSSGRVQARFGFGKKKTPAKKSPSSKTISNRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFES
AEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEGLTGVTWQDAGKVELVEGSSYLGQPLPFSLTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGK
YFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSSSSS