; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CaUC04G073780 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC04G073780
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionUnknown protein
Genome locationCiama_Chr04:22957830..22959631
RNA-Seq ExpressionCaUC04G073780
SyntenyCaUC04G073780
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KVI09495.1 hypothetical protein Ccrd_012103, partial [Cynara cardunculus var. scolymus]1.0e-2037.91Show/hide
Query:  QLEEARRNASFFKGSLCVKSFPIRPNGLGIMTTALKQSI--DPHQHGCPRRRMRQSMIRLSPISKNSSIQKPNQLLLKSPTLFGSSMRRSTKSGSNTITI
        +LEEA R+    +G   ++ F +  N  G+ TT  K       ++         +S ++L  +        PN+LLLK PTL    +R S+++G NT+TI
Subjt:  QLEEARRNASFFKGSLCVKSFPIRPNGLGIMTTALKQSI--DPHQHGCPRRRMRQSMIRLSPISKNSSIQKPNQLLLKSPTLFGSSMRRSTKSGSNTITI

Query:  SPFTHTLHHPITTSFNTSSSRLSQ--FHNHIIITSGNSSHLRNSKSLTPKLHHRPSILFHHPLHLIQMTSLESISCHTPIEW
        S F H LHHP+TT  + S  RL Q  FH+  +  S +SSHLR+ +SL+ +LHHR   L +H LHLI+M     + CHTP++W
Subjt:  SPFTHTLHHPITTSFNTSSSRLSQ--FHNHIIITSGNSSHLRNSKSLTPKLHHRPSILFHHPLHLIQMTSLESISCHTPIEW
KVI09498.1 hypothetical protein Ccrd_012105 [Cynara cardunculus var. scolymus]1.7e-0760Show/hide
Query:  QNLDGCSAPLEDVVNIFLATWLTMLLTVLFKFSSKCLKSIAWQSATKNVDDMSFKISMAS
        +NL+G S+P   +V  FLATWLT+  TV   FSSK LKS+ W  ATKN  DMSFKIS AS
Subjt:  QNLDGCSAPLEDVVNIFLATWLTMLLTVLFKFSSKCLKSIAWQSATKNVDDMSFKISMAS
TrEMBL top hitse value%identityAlignment
A0A0A9FM61 Uncharacterized protein1.3e-0551.52Show/hide
Query:  VSFSQNLDGCSAPLED--VVNIFLATWLTMLLTVLFKFSSKCLKSIAWQSATKNVDDMSFKISMAS
        +SFSQN     +P  +  V+++FLAT +T LLT L  FSS   +S+AW SAT+NV+DMSF++S AS
Subjt:  VSFSQNLDGCSAPLED--VVNIFLATWLTMLLTVLFKFSSKCLKSIAWQSATKNVDDMSFKISMAS
A0A118K5R3 Uncharacterized protein8.2e-0860Show/hide
Query:  QNLDGCSAPLEDVVNIFLATWLTMLLTVLFKFSSKCLKSIAWQSATKNVDDMSFKISMAS
        +NL+G S+P   +V  FLATWLT+  TV   FSSK LKS+ W  ATKN  DMSFKIS AS
Subjt:  QNLDGCSAPLEDVVNIFLATWLTMLLTVLFKFSSKCLKSIAWQSATKNVDDMSFKISMAS
A0A118K5R4 Uncharacterized protein (Fragment)5.0e-2137.91Show/hide
Query:  QLEEARRNASFFKGSLCVKSFPIRPNGLGIMTTALKQSI--DPHQHGCPRRRMRQSMIRLSPISKNSSIQKPNQLLLKSPTLFGSSMRRSTKSGSNTITI
        +LEEA R+    +G   ++ F +  N  G+ TT  K       ++         +S ++L  +        PN+LLLK PTL    +R S+++G NT+TI
Subjt:  QLEEARRNASFFKGSLCVKSFPIRPNGLGIMTTALKQSI--DPHQHGCPRRRMRQSMIRLSPISKNSSIQKPNQLLLKSPTLFGSSMRRSTKSGSNTITI

Query:  SPFTHTLHHPITTSFNTSSSRLSQ--FHNHIIITSGNSSHLRNSKSLTPKLHHRPSILFHHPLHLIQMTSLESISCHTPIEW
        S F H LHHP+TT  + S  RL Q  FH+  +  S +SSHLR+ +SL+ +LHHR   L +H LHLI+M     + CHTP++W
Subjt:  SPFTHTLHHPITTSFNTSSSRLSQ--FHNHIIITSGNSSHLRNSKSLTPKLHHRPSILFHHPLHLIQMTSLESISCHTPIEW
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGTATCTTTCTCACAAAATCTTGATGGGTGTAGTGCACCATTGGAGGATGTCGTCAACATCTTCTTGGCTACTTGGCTCACTATGCTTTTAACTGTGCTC
TTCAAGTTTTCCTCCAAGTGCCTCAAGTCAATTGCTTGGCAGAGTGCAACTAAAAATGTTGACGACATGAGTTTCAAGATATCAATGGCTTCAGCTGACAATAGA
AGCCAACCCAGAACCAACAGCAGTGCCATTGACAAGAGCAAGGCCTTCTTTGGGTTGCAACTCGAAGAAGCCAGAAGGAATGCCAGCTTTTTTAAAGGCAGTCTC
TGCGTCAAGAGTTTCCCCATTAGGCCCAATGGCCTTGGAATTATGACGACCGCCTTGAAGCAGAGTATTGATCCTCACCAACATGGCTGCCCTCGTCGCCGAATG
AGGCAAAGTATGATTCGACTCAGCCCCATTTCCAAAAATTCCAGCATTCAAAAACCGAATCAACTCCTTCTGAAGAGCCCCACCTTGTTTGGTTCTTCTATGAGA
CGTAGCACCAAATCCGGTAGTAACACCATAACTATCAGTCCCTTTACTCATACTCTCCATCACCCAATCACTACTAGCTTTAACACTAGCTCTAGCAGACTCAGC
CAATTCCACAATCACATCATTATCACGAGTGGCAATAGCAGCCACTTGAGAAATAGTAAGAGTCTCACCCCCAAGCTTCACCACAGGCCGTCTATACTCTTCCAC
CATCCTCTTCACCTCATCCAGATGACTTCCCTTGAGAGCATCAGCTGCCACACCCCAATTGAGTGGATCAACATGGCTTGTGCAAAAGCTCTCCATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGTATCTTTCTCACAAAATCTTGATGGGTGTAGTGCACCATTGGAGGATGTCGTCAACATCTTCTTGGCTACTTGGCTCACTATGCTTTTAACTGTGCTC
TTCAAGTTTTCCTCCAAGTGCCTCAAGTCAATTGCTTGGCAGAGTGCAACTAAAAATGTTGACGACATGAGTTTCAAGATATCAATGGCTTCAGCTGACAATAGA
AGCCAACCCAGAACCAACAGCAGTGCCATTGACAAGAGCAAGGCCTTCTTTGGGTTGCAACTCGAAGAAGCCAGAAGGAATGCCAGCTTTTTTAAAGGCAGTCTC
TGCGTCAAGAGTTTCCCCATTAGGCCCAATGGCCTTGGAATTATGACGACCGCCTTGAAGCAGAGTATTGATCCTCACCAACATGGCTGCCCTCGTCGCCGAATG
AGGCAAAGTATGATTCGACTCAGCCCCATTTCCAAAAATTCCAGCATTCAAAAACCGAATCAACTCCTTCTGAAGAGCCCCACCTTGTTTGGTTCTTCTATGAGA
CGTAGCACCAAATCCGGTAGTAACACCATAACTATCAGTCCCTTTACTCATACTCTCCATCACCCAATCACTACTAGCTTTAACACTAGCTCTAGCAGACTCAGC
CAATTCCACAATCACATCATTATCACGAGTGGCAATAGCAGCCACTTGAGAAATAGTAAGAGTCTCACCCCCAAGCTTCACCACAGGCCGTCTATACTCTTCCAC
CATCCTCTTCACCTCATCCAGATGACTTCCCTTGAGAGCATCAGCTGCCACACCCCAATTGAGTGGATCAACATGGCTTGTGCAAAAGCTCTCCATTGA
Protein sequenceShow/hide protein sequence
MEVSFSQNLDGCSAPLEDVVNIFLATWLTMLLTVLFKFSSKCLKSIAWQSATKNVDDMSFKISMASADNRSQPRTNSSAIDKSKAFFGLQLEEARRNASFFKGSL
CVKSFPIRPNGLGIMTTALKQSIDPHQHGCPRRRMRQSMIRLSPISKNSSIQKPNQLLLKSPTLFGSSMRRSTKSGSNTITISPFTHTLHHPITTSFNTSSSRLS
QFHNHIIITSGNSSHLRNSKSLTPKLHHRPSILFHHPLHLIQMTSLESISCHTPIEWINMACAKALH