; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CaUC04G074190 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC04G074190
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionUnknown protein
Genome locationCiama_Chr04:23334727..23352320
RNA-Seq ExpressionCaUC04G074190
SyntenyCaUC04G074190
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6603700.1 Zinc finger CCCH domain-containing protein 21, partial [Cucurbita argyrosperma subsp. sororia]7.1e-1066.67Show/hide
Query:  QSCSDFLVTFSLCTSAGLLVEYLFLPITPFSFVCDMLGLFEFGTLSRAIVGPAGRTSSPNSSCKSL
        +SCSDFLV  S CTSAGLLVEYL LPI PF+FV DML L +        V PAG+TSSPNSS KSL
Subjt:  QSCSDFLVTFSLCTSAGLLVEYLFLPITPFSFVCDMLGLFEFGTLSRAIVGPAGRTSSPNSSCKSL
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCCAATCTTGCAGTGATTTCTTGGTGACTTTTAGCCTCTGTACATCTGCTGGTCTCCTAGTGGAGTACTTATTCCTCCCCATAACTCCTTTCAGTTTTGTATGTGA
CATGTTAGGGCTTTTTGAATTTGGCACTTTATCAAGAGCAATTGTAGGTCCTGCAGGAAGAACCTCAAGCCCTAATTCGTCTTGCAAGAGTTTGGTTATTGCATCTCTCA
CCTCAAAGTTCTGTGGAGCTGAATCTGTTTCAACTTTATTCACTTCTAAGATGATGAATATATCATCTTTTACTGATTCTCCTACAGCCAAGTTAAAACGTAAGCATTCC
CAAAGAAGTATGTCAAGAGAGACTGAGACCTTGATAGCCGTCGTGTATGCAACAACATCAGGATCAACTCCAGCCATTCGCATGAGTTCCTTTTCCCTCCAGGAGCGAAA
TAAACGAAAAGCTCTATCGAACTGGCGAGCTTCAACACAAGCATGTAAAAGGATATTACAACACTGTGTATTAGGTTCACATCCTGCTGAAACCATCTCTTCGAACAATT
GGATAGCCAGCTCAACAAGACCCGAATTAGCACATGAACTTATCAAAGAAGACCAGTGCTGGAGAGGAATTCTTCCGCCGGATGAGGCGCCGGCAATGTCCAATTGGACA
GAGGACAGAAGAGGGGGACGGGAATGGCGAGTGGACGGGTGTGAAGAGAGCGGCAAATGCGTTCCGGTGGGGGTTAGGTTGGAGAGAGAGGATTTGGGGGCTTTGGAGTG
GCTATGGCAGTGGCGACGAGGTCCGGCAATGGAGGCGGAGGAGGAGGAGGTGCCGAGGATGAGGAAGACTCGCATTCTTGGCCAACGGCAAATGACAATTTTGAAAATAG
ATCAGCTATCTCAGCGACCACCAATGATCACTATGATAATAAACACGTTCATAGAAAATGTTTTGAATTCTTAA
mRNA sequenceShow/hide mRNA sequence
CCTAAATAGAACAGATATACTCATTTCCCGCTTCTCCCCGTCTCAGTCGCTCTTATCTCTCCCTCCATTTCCATGGCCGACAAGAGAAAGCGCCGGCGATCTGAACTTAA
TCCCGACGGTGAAGCTCAACTTCCCTTCAAGAGCAGCCTCAAACCTGATTCCGTCATTCTTCAGATTCTCAAAGAGTTCAGTGACTGCTCCACCGCCTCATCTTCCTCTT
CATCTAAAACCCTCGACGACCTCGGCCTCTCCTCCTCCTGCCGCGAGGTCACCGATCTTTCTCTTTCGTCCGTGCAGTCCACAATTGAATCTCTGATCCTCAAAATTGCT
CGTTCCATTCTTTCCGGCAATGGTTTTGCCTTTGACGTTCCTTCTCGATCGGCGGCCAACCAATTATACGTTCCGGAGCTCGATCGCATCGTCTTGAAAGACAAAACTGC
CCTCCGACCCTACGCCAATATTTCCACTGTCCGGAAAACCACCATTACTACTCGTATTCTTCAGCTTGTCCACCAACTTTGCTTAAAAAACATCCATGTGACCAAGCGAG
ATCTGTTCTACACGGATGTAAAGCTCTTCCAGGATCAGACCCAGTCTGATTCTGTGCTTGATGATGTTTCTTGCATTCTCGGCTGTACTCGGTCGAGTCTTAATGTGATT
GCTGCAGAGAAGGGGGTGGTTGTGGGAAGGCTCATTTTCAGTGACAATGGGGATATGATCGATTGCACTAAAATGGGTATGGGAGGAAAAGCAATTCCACCAAATATTGA
TAGAGTTGGAGATATGCAGAGTGATGCATTGTTTATACTCTTAGTTGAGAAAGATGCTGCGTACATTAGGTTAGCTGAGGACAGATTTTACAATCGCTTTCCATGCATAA
TTGTGACGGCTAAGGGACAGCCAGATGTGGCCACGAGATTGTTCTTGAAGAAGATGAAGATGGAGCTGAAGCTCCCAGTTCTTGCACTTGTGGACAGTGATCCATATGGG
TTGAAGATTCTATCTGTCTATGGATGTGGATCAAAGAATATGTCTTATGACAGTGCTAATTTGACTACTCCTGATATCAAGTGGCTGGGAATAAGGCCGAGTGATTTGGA
TAAATATAAGATACCTGAGCAGTGCAGGTTACCTATGACAGAGCAGGATATTAAGACTGGGAAAGATCTGTTAGAGGAAGATTTTGTCAAGAAGAATCCTGGTTGGGTTG
AAGAGCTCACTTTAATGGTGAAGACAAAGCAAAAGGCTGAAATTCAGGCATTGAGCTCATTTGGGTTTCAGTATCTGTCAGAGGTTTATTTGCCATTGAAGCTGCAGCAG
AAGGATTGGCTGTGACCTAAGTGCTTGTTATTGTGTATTGTAATCAATTGTTGAATTTCTGTTGGAACATTATGAAACTTGAGCAACGATCAGTTTGTTTGATCAGATAA
TGTTATTTCTGACCAAACCATATTCAGCTTTCAAAGTTATTTGAGTGCAGCGGCATAATATTGAAGAAGCATTGGAATCACAGATCCTGATATCAATGAGCCAATCTTGC
AGTGATTTCTTGGTGACTTTTAGCCTCTGTACATCTGCTGGTCTCCTAGTGGAGTACTTATTCCTCCCCATAACTCCTTTCAGTTTTGTATGTGACATGTTAGGGCTTTT
TGAATTTGGCACTTTATCAAGAGCAATTGTAGGTCCTGCAGGAAGAACCTCAAGCCCTAATTCGTCTTGCAAGAGTTTGGTTATTGCATCTCTCACCTCAAAGTTCTGTG
GAGCTGAATCTGTTTCAACTTTATTCACTTCTAAGATGATGAATATATCATCTTTTACTGATTCTCCTACAGCCAAGTTAAAACGTAAGCATTCCCAAAGAAGTATGTCA
AGAGAGACTGAGACCTTGATAGCCGTCGTGTATGCAACAACATCAGGATCAACTCCAGCCATTCGCATGAGTTCCTTTTCCCTCCAGGAGCGAAATAAACGAAAAGCTCT
ATCGAACTGGCGAGCTTCAACACAAGCATGTAAAAGGATATTACAACACTGTGTATTAGGTTCACATCCTGCTGAAACCATCTCTTCGAACAATTGGATAGCCAGCTCAA
CAAGACCCGAATTAGCACATGAACTTATCAAAGAAGACCAGTGCTGGAGAGGAATTCTTCCGCCGGATGAGGCGCCGGCAATGTCCAATTGGACAGAGGACAGAAGAGGG
GGACGGGAATGGCGAGTGGACGGGTGTGAAGAGAGCGGCAAATGCGTTCCGGTGGGGGTTAGGTTGGAGAGAGAGGATTTGGGGGCTTTGGAGTGGCTATGGCAGTGGCG
ACGAGGTCCGGCAATGGAGGCGGAGGAGGAGGAGGTGCCGAGGATGAGGAAGACTCGCATTCTTGGCCAACGGCAAATGACAATTTTGAAAATAGATCAGCTATCTCAGC
GACCACCAATGATCACTATGATAATAAACACGTTCATAGAAAATGTTTTGAATTCTTAA
Protein sequenceShow/hide protein sequence
MSQSCSDFLVTFSLCTSAGLLVEYLFLPITPFSFVCDMLGLFEFGTLSRAIVGPAGRTSSPNSSCKSLVIASLTSKFCGAESVSTLFTSKMMNISSFTDSPTAKLKRKHS
QRSMSRETETLIAVVYATTSGSTPAIRMSSFSLQERNKRKALSNWRASTQACKRILQHCVLGSHPAETISSNNWIASSTRPELAHELIKEDQCWRGILPPDEAPAMSNWT
EDRRGGREWRVDGCEESGKCVPVGVRLEREDLGALEWLWQWRRGPAMEAEEEEVPRMRKTRILGQRQMTILKIDQLSQRPPMITMIINTFIENVLNS