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CaUC04G074800 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC04G074800
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
Descriptionthermospermine synthase ACAULIS5
Genome locationCiama_Chr04:23883513..23884379
RNA-Seq ExpressionCaUC04G074800
SyntenyCaUC04G074800
Gene Ontology termsGO:0006596 - polyamine biosynthetic process (biological process)
GO:0010487 - thermospermine synthase activity (molecular function)
InterPro domainsIPR029063 - S-adenosyl-L-methionine-dependent methyltransferase
IPR030374 - Polyamine biosynthesis domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK00727.1 thermospermine synthase ACAULIS5 [Cucumis melo var. makuwa]2.4e-2196.08Show/hide
Query:  ELEKRKEKYDIIIGDLADPVKDGPCYKLYTKSFYHDIVKPKLHHNGIFVTQ
        ELEKRKEKYD+IIGDLADPVKDGPCYKLYTKSFYHDI+KPKLHHNGIFVTQ
Subjt:  ELEKRKEKYDIIIGDLADPVKDGPCYKLYTKSFYHDIVKPKLHHNGIFVTQ

XP_004144211.1 thermospermine synthase ACAULIS5 [Cucumis sativus]1.1e-2198.04Show/hide
Query:  ELEKRKEKYDIIIGDLADPVKDGPCYKLYTKSFYHDIVKPKLHHNGIFVTQ
        ELEKRKEKYD+IIGDLADPVKDGPCYKLYTKSFYHDIVKPKLHHNGIFVTQ
Subjt:  ELEKRKEKYDIIIGDLADPVKDGPCYKLYTKSFYHDIVKPKLHHNGIFVTQ

XP_008445532.2 PREDICTED: thermospermine synthase ACAULIS5 [Cucumis melo]2.4e-2196.08Show/hide
Query:  ELEKRKEKYDIIIGDLADPVKDGPCYKLYTKSFYHDIVKPKLHHNGIFVTQ
        ELEKRKEKYD+IIGDLADPVKDGPCYKLYTKSFYHDI+KPKLHHNGIFVTQ
Subjt:  ELEKRKEKYDIIIGDLADPVKDGPCYKLYTKSFYHDIVKPKLHHNGIFVTQ

XP_038886733.1 thermospermine synthase ACAULIS5 isoform X1 [Benincasa hispida]1.1e-2196.15Show/hide
Query:  SELEKRKEKYDIIIGDLADPVKDGPCYKLYTKSFYHDIVKPKLHHNGIFVTQ
        +ELEKR+EKYDIIIGDLADPVKDGPCYKLYTKSFYHDIVKPKLHHNGIFVTQ
Subjt:  SELEKRKEKYDIIIGDLADPVKDGPCYKLYTKSFYHDIVKPKLHHNGIFVTQ

XP_038886734.1 thermospermine synthase ACAULIS5 isoform X2 [Benincasa hispida]1.1e-2196.15Show/hide
Query:  SELEKRKEKYDIIIGDLADPVKDGPCYKLYTKSFYHDIVKPKLHHNGIFVTQ
        +ELEKR+EKYDIIIGDLADPVKDGPCYKLYTKSFYHDIVKPKLHHNGIFVTQ
Subjt:  SELEKRKEKYDIIIGDLADPVKDGPCYKLYTKSFYHDIVKPKLHHNGIFVTQ

TrEMBL top hitse value%identityAlignment
A0A0A0KIK6 PABS domain-containing protein5.1e-2298.04Show/hide
Query:  ELEKRKEKYDIIIGDLADPVKDGPCYKLYTKSFYHDIVKPKLHHNGIFVTQ
        ELEKRKEKYD+IIGDLADPVKDGPCYKLYTKSFYHDIVKPKLHHNGIFVTQ
Subjt:  ELEKRKEKYDIIIGDLADPVKDGPCYKLYTKSFYHDIVKPKLHHNGIFVTQ

A0A1S3BCH1 thermospermine synthase ACAULIS51.1e-2196.08Show/hide
Query:  ELEKRKEKYDIIIGDLADPVKDGPCYKLYTKSFYHDIVKPKLHHNGIFVTQ
        ELEKRKEKYD+IIGDLADPVKDGPCYKLYTKSFYHDI+KPKLHHNGIFVTQ
Subjt:  ELEKRKEKYDIIIGDLADPVKDGPCYKLYTKSFYHDIVKPKLHHNGIFVTQ

A0A5A7VGW4 Thermospermine synthase ACAULIS54.8e-2095.83Show/hide
Query:  KRKEKYDIIIGDLADPVKDGPCYKLYTKSFYHDIVKPKLHHNGIFVTQ
        KRKEKYD+IIGDLADPVKDGPCYKLYTKSFYHDI+KPKLHHNGIFVTQ
Subjt:  KRKEKYDIIIGDLADPVKDGPCYKLYTKSFYHDIVKPKLHHNGIFVTQ

A0A5D3BNB5 Thermospermine synthase ACAULIS51.1e-2196.08Show/hide
Query:  ELEKRKEKYDIIIGDLADPVKDGPCYKLYTKSFYHDIVKPKLHHNGIFVTQ
        ELEKRKEKYD+IIGDLADPVKDGPCYKLYTKSFYHDI+KPKLHHNGIFVTQ
Subjt:  ELEKRKEKYDIIIGDLADPVKDGPCYKLYTKSFYHDIVKPKLHHNGIFVTQ

A0A6J1K6U5 thermospermine synthase ACAULIS5-like6.3e-2092.31Show/hide
Query:  SELEKRKEKYDIIIGDLADPVKDGPCYKLYTKSFYHDIVKPKLHHNGIFVTQ
        +ELEKRKEKYDIIIGDLADPVKDGPCYKLYTKSFY +IVKPKLH NGIFVTQ
Subjt:  SELEKRKEKYDIIIGDLADPVKDGPCYKLYTKSFYHDIVKPKLHHNGIFVTQ

SwissProt top hitse value%identityAlignment
C3MQ26 Polyamine aminopropyltransferase1.9e-0548Show/hide
Query:  LEKRKEKYDIIIGDLADPVKDGPCYKLYTKSFYHDIVKPKLHHNGIFVTQ
        + + K+KYD II DL DP+KD   Y LYTK FY  + +  L+  G  VTQ
Subjt:  LEKRKEKYDIIIGDLADPVKDGPCYKLYTKSFYHDIVKPKLHHNGIFVTQ

C3N5P4 Polyamine aminopropyltransferase1.9e-0548Show/hide
Query:  LEKRKEKYDIIIGDLADPVKDGPCYKLYTKSFYHDIVKPKLHHNGIFVTQ
        + + K+KYD II DL DP+KD   Y LYTK FY  + +  L+  G  VTQ
Subjt:  LEKRKEKYDIIIGDLADPVKDGPCYKLYTKSFYHDIVKPKLHHNGIFVTQ

C4KHC0 Polyamine aminopropyltransferase1.9e-0548Show/hide
Query:  LEKRKEKYDIIIGDLADPVKDGPCYKLYTKSFYHDIVKPKLHHNGIFVTQ
        + + K+KYD II DL DP+KD   Y LYTK FY  + +  L+  G  VTQ
Subjt:  LEKRKEKYDIIIGDLADPVKDGPCYKLYTKSFYHDIVKPKLHHNGIFVTQ

Q9S7X6 Thermospermine synthase ACAULIS54.3e-1876.92Show/hide
Query:  SELEKRKEKYDIIIGDLADPVKDGPCYKLYTKSFYHDIVKPKLHHNGIFVTQ
        +ELEKR+EK+DII+GDLADPV+ GPCY+LYTKSFY +I+KPKL  NGIFVTQ
Subjt:  SELEKRKEKYDIIIGDLADPVKDGPCYKLYTKSFYHDIVKPKLHHNGIFVTQ

Q9UXE4 Polyamine aminopropyltransferase1.9e-0548Show/hide
Query:  LEKRKEKYDIIIGDLADPVKDGPCYKLYTKSFYHDIVKPKLHHNGIFVTQ
        +++ KEKYD II DL DP+K+   Y LYTK FY  + +  L+  G  VTQ
Subjt:  LEKRKEKYDIIIGDLADPVKDGPCYKLYTKSFYHDIVKPKLHHNGIFVTQ

Arabidopsis top hitse value%identityAlignment
AT5G19530.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein3.1e-1976.92Show/hide
Query:  SELEKRKEKYDIIIGDLADPVKDGPCYKLYTKSFYHDIVKPKLHHNGIFVTQ
        +ELEKR+EK+DII+GDLADPV+ GPCY+LYTKSFY +I+KPKL  NGIFVTQ
Subjt:  SELEKRKEKYDIIIGDLADPVKDGPCYKLYTKSFYHDIVKPKLHHNGIFVTQ

AT5G19530.2 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein3.1e-1976.92Show/hide
Query:  SELEKRKEKYDIIIGDLADPVKDGPCYKLYTKSFYHDIVKPKLHHNGIFVTQ
        +ELEKR+EK+DII+GDLADPV+ GPCY+LYTKSFY +I+KPKL  NGIFVTQ
Subjt:  SELEKRKEKYDIIIGDLADPVKDGPCYKLYTKSFYHDIVKPKLHHNGIFVTQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGTCGGAATTGGAAAAGAGAAAGGAGAAATATGATATAATTATTGGAGATCTAGCAGACCCCGTTAAAGATGGGCCTTGCTACAAGCTCTACACCAAGTCATTTTA
CCACGACATTGTCAAACCTAAACTCCACCACAATGGCATCTTTGTAACTCAGGTCAGATTATCCACTCTTCTTTTCTACCTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGGTCGGAATTGGAAAAGAGAAAGGAGAAATATGATATAATTATTGGAGATCTAGCAGACCCCGTTAAAGATGGGCCTTGCTACAAGCTCTACACCAAGTCATTTTA
CCACGACATTGTCAAACCTAAACTCCACCACAATGGCATCTTTGTAACTCAGGTCAGATTATCCACTCTTCTTTTCTACCTCTAA
Protein sequenceShow/hide protein sequence
MGSELEKRKEKYDIIIGDLADPVKDGPCYKLYTKSFYHDIVKPKLHHNGIFVTQVRLSTLLFYL