; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CaUC04G074900 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC04G074900
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
Descriptionprotein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE-like
Genome locationCiama_Chr04:24025901..24028456
RNA-Seq ExpressionCaUC04G074900
SyntenyCaUC04G074900
Gene Ontology termsGO:0009639 - response to red or far red light (biological process)
GO:0051457 - maintenance of protein location in nucleus (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
InterPro domainsIPR037766 - Protein FAR-RED ELONGATED HYPOCOTYL 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6603645.1 Protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE protein, partial [Cucurbita argyrosperma subsp. sororia]3.1e-6767.94Show/hide
Query:  CLASIFLS-STSTMDQNNHNHHHSSHCDTDRFSGFQPWNTEGFDLKKKRRLLIEQLSLPTPKLPCLG--LRSVSFPHGGGNSKFNKKPQEGEEGEESTLT
        CL  I +S S+ TMDQ NH  HH SH  T  FSGFQPW+TE FD+KKKR+LL EQLSLPTPKLPC G    S+SFP+G  + KFNKK +  EEG ES+LT
Subjt:  CLASIFLS-STSTMDQNNHNHHHSSHCDTDRFSGFQPWNTEGFDLKKKRRLLIEQLSLPTPKLPCLG--LRSVSFPHGGGNSKFNKKPQEGEEGEESTLT

Query:  EIAIEGKEMSKGQVQMKGE----KDKLQWSYGPEEDLLEFGSQGHSCIYEQCCSDTAQSLLLPTESKHDFVLSSGRWSADPEAESKTIKPTIDQEFEQYF
        ++A EGK+MS  +V+++GE    KDKL  +YG EEDLLEFGS G+S IYEQCCSD+ Q+LLLPT+SKHDFVLSSGRWS DPEAESK I PTIDQEFEQYF
Subjt:  EIAIEGKEMSKGQVQMKGE----KDKLQWSYGPEEDLLEFGSQGHSCIYEQCCSDTAQSLLLPTESKHDFVLSSGRWSADPEAESKTIKPTIDQEFEQYF

Query:  SVLLPSLDP
        S +LPSLDP
Subjt:  SVLLPSLDP

KAG7033829.1 hypothetical protein SDJN02_03554, partial [Cucurbita argyrosperma subsp. argyrosperma]1.3e-6569.39Show/hide
Query:  MDQNNHNHHHSSHCDTDRFSGFQPWNTEGFDLKKKRRLLIEQLSLPTPKLPCLG--LRSVSFPHGGGNSKFNKKPQEGEEGEESTLTEIAIEGKEMSKGQ
        MDQ NH  HH SH  T  FSGFQPW+TE FD+KKKR+LL EQLSLPTPKLPC G    S+SFP+G  + KFNKK +  EEG ES+LT++A EGK+MS  +
Subjt:  MDQNNHNHHHSSHCDTDRFSGFQPWNTEGFDLKKKRRLLIEQLSLPTPKLPCLG--LRSVSFPHGGGNSKFNKKPQEGEEGEESTLTEIAIEGKEMSKGQ

Query:  VQMKGE----KDKLQWSYGPEEDLLEFGSQGHSCIYEQCCSDTAQSLLLPTESKHDFVLSSGRWSADPEAESKTIKPTIDQEFEQYFSVLLPSLDP
        V+++GE    KDKL  +YG EEDLLEFGS G+S IYEQCCSD+ Q+LLLPT+SKHDFVLSSGRWS DPEAESK I PTIDQEFEQYFS +LPSLDP
Subjt:  VQMKGE----KDKLQWSYGPEEDLLEFGSQGHSCIYEQCCSDTAQSLLLPTESKHDFVLSSGRWSADPEAESKTIKPTIDQEFEQYFSVLLPSLDP

XP_008448098.1 PREDICTED: uncharacterized protein LOC103490381 [Cucumis melo]1.0e-7070.73Show/hide
Query:  MDQNNHNHHHSSHCDTD---------------RFSGFQPWNTEGFDLKKKRRLLIEQLSLPTPKLPCLGLRSVSFPHGGGNSKFNKKPQEGEEGEESTLT
        MDQNN  HHH S  DTD               RF GFQ WNTE  D+KKKRRLLI+QLSLPT KLPC G RS+S PHG  N KFNKKP   +EGE STLT
Subjt:  MDQNNHNHHHSSHCDTD---------------RFSGFQPWNTEGFDLKKKRRLLIEQLSLPTPKLPCLGLRSVSFPHGGGNSKFNKKPQEGEEGEESTLT

Query:  EIAIEGKEMSKGQVQMKGEKDKLQWSYGPEEDLLEFGSQGHSCIYEQCCSDTAQSLLLPTESKHDFVLSSGRWSADPEAESKTIKPTIDQEFEQYFSVLL
        +I I+GKEMS+ QV+M+GEKDKLQ SYG EEDLLEFG+ GHSCIYE+CCS +AQSLLLPT+SK +FVLSSGRWS D E ESKT+KPTIDQEFEQYFSVLL
Subjt:  EIAIEGKEMSKGQVQMKGEKDKLQWSYGPEEDLLEFGSQGHSCIYEQCCSDTAQSLLLPTESKHDFVLSSGRWSADPEAESKTIKPTIDQEFEQYFSVLL

Query:  PSLDP
        PSLDP
Subjt:  PSLDP

XP_011653642.1 uncharacterized protein LOC105435241 [Cucumis sativus]3.6e-6364.52Show/hide
Query:  MDQNNHNHHHSSHCDTD---------------RFSGFQPWNTEGFDLKKKRRLLIEQLSLPTPKLPCLGLRSVSFPHGGGNSKFNKKPQEGE--------
        MDQNN  HHH SH DTD               R  G Q WNTE  D+K KRRLLI+QLSLPT KLP  G RS+S PHG  N KFN +PQE E        
Subjt:  MDQNNHNHHHSSHCDTD---------------RFSGFQPWNTEGFDLKKKRRLLIEQLSLPTPKLPCLGLRSVSFPHGGGNSKFNKKPQEGE--------

Query:  ---EGEESTLTEIAIE-GKEMSKGQVQMKGEKDKLQWSYGPEEDLLEFGSQGHSCIYEQCCSDTAQSLLLPTESKHDFVLSSGRWSADPEAESKTIKPTI
           EGEESTLT+IAI+  KEMS+ QV+M+G KDKLQ SYG EEDLLEFGS+ + CIYE+CCS +AQ+LLLPT+SK +FVLSSGRWS D E ESK IKPTI
Subjt:  ---EGEESTLTEIAIE-GKEMSKGQVQMKGEKDKLQWSYGPEEDLLEFGSQGHSCIYEQCCSDTAQSLLLPTESKHDFVLSSGRWSADPEAESKTIKPTI

Query:  DQEFEQYFSVLLPSLDP
        DQEFEQYFSVLLPSLDP
Subjt:  DQEFEQYFSVLLPSLDP

XP_038883311.1 protein FAR-RED ELONGATED HYPOCOTYL 1-like [Benincasa hispida]8.8e-7879.9Show/hide
Query:  MDQNNHNHHHSSHCDTD---RFSGFQPWNTEGFDLKKKRRLLIEQLSLPTPKLPCLGLRSVSFPHGGGNSKFNKKPQEGEEGEESTLTEIAIEGKEMSKG
        M+Q N  HHH SHCDTD    F+ FQPWNTEG D+KKKRRLLI+QLSLPT KLPC G  S+S PHG  N KF+KK QE EEGEEST TEIAIEGKE SK 
Subjt:  MDQNNHNHHHSSHCDTD---RFSGFQPWNTEGFDLKKKRRLLIEQLSLPTPKLPCLGLRSVSFPHGGGNSKFNKKPQEGEEGEESTLTEIAIEGKEMSKG

Query:  QVQMKGEKDKLQWSYGPEEDLLEFGSQGHSCIYEQCCSDTAQS-LLLPTESKHDFVLSSGRWSADPEAESKTIKPTIDQEFEQYFSVLLPSLDP
        QVQM+GEKDKLQ SYG EEDLLEFGS GH+CIYEQCCSD+AQS LLLPT SKHDFVLSSGRWS DPEAESKTIKPTIDQEFEQYFSV LPSLDP
Subjt:  QVQMKGEKDKLQWSYGPEEDLLEFGSQGHSCIYEQCCSDTAQS-LLLPTESKHDFVLSSGRWSADPEAESKTIKPTIDQEFEQYFSVLLPSLDP

TrEMBL top hitse value%identityAlignment
A0A0A0KZL8 Uncharacterized protein1.7e-6364.52Show/hide
Query:  MDQNNHNHHHSSHCDTD---------------RFSGFQPWNTEGFDLKKKRRLLIEQLSLPTPKLPCLGLRSVSFPHGGGNSKFNKKPQEGE--------
        MDQNN  HHH SH DTD               R  G Q WNTE  D+K KRRLLI+QLSLPT KLP  G RS+S PHG  N KFN +PQE E        
Subjt:  MDQNNHNHHHSSHCDTD---------------RFSGFQPWNTEGFDLKKKRRLLIEQLSLPTPKLPCLGLRSVSFPHGGGNSKFNKKPQEGE--------

Query:  ---EGEESTLTEIAIE-GKEMSKGQVQMKGEKDKLQWSYGPEEDLLEFGSQGHSCIYEQCCSDTAQSLLLPTESKHDFVLSSGRWSADPEAESKTIKPTI
           EGEESTLT+IAI+  KEMS+ QV+M+G KDKLQ SYG EEDLLEFGS+ + CIYE+CCS +AQ+LLLPT+SK +FVLSSGRWS D E ESK IKPTI
Subjt:  ---EGEESTLTEIAIE-GKEMSKGQVQMKGEKDKLQWSYGPEEDLLEFGSQGHSCIYEQCCSDTAQSLLLPTESKHDFVLSSGRWSADPEAESKTIKPTI

Query:  DQEFEQYFSVLLPSLDP
        DQEFEQYFSVLLPSLDP
Subjt:  DQEFEQYFSVLLPSLDP

A0A1S3BJU4 uncharacterized protein LOC1034903815.0e-7170.73Show/hide
Query:  MDQNNHNHHHSSHCDTD---------------RFSGFQPWNTEGFDLKKKRRLLIEQLSLPTPKLPCLGLRSVSFPHGGGNSKFNKKPQEGEEGEESTLT
        MDQNN  HHH S  DTD               RF GFQ WNTE  D+KKKRRLLI+QLSLPT KLPC G RS+S PHG  N KFNKKP   +EGE STLT
Subjt:  MDQNNHNHHHSSHCDTD---------------RFSGFQPWNTEGFDLKKKRRLLIEQLSLPTPKLPCLGLRSVSFPHGGGNSKFNKKPQEGEEGEESTLT

Query:  EIAIEGKEMSKGQVQMKGEKDKLQWSYGPEEDLLEFGSQGHSCIYEQCCSDTAQSLLLPTESKHDFVLSSGRWSADPEAESKTIKPTIDQEFEQYFSVLL
        +I I+GKEMS+ QV+M+GEKDKLQ SYG EEDLLEFG+ GHSCIYE+CCS +AQSLLLPT+SK +FVLSSGRWS D E ESKT+KPTIDQEFEQYFSVLL
Subjt:  EIAIEGKEMSKGQVQMKGEKDKLQWSYGPEEDLLEFGSQGHSCIYEQCCSDTAQSLLLPTESKHDFVLSSGRWSADPEAESKTIKPTIDQEFEQYFSVLL

Query:  PSLDP
        PSLDP
Subjt:  PSLDP

A0A6J1CPJ7 uncharacterized protein LOC1110135563.8e-4259.89Show/hide
Query:  HHSSHCDTDRFSGFQPWNTEGFDLKKKRRLLI--EQLSLPTPKLPCLG-LRSVSFPHGGGNSKFNKKPQEGEEGEESTLTEIAIEGKEMSKGQVQMKGEK
        HH SH  TD F GFQPWNT GFD+KKKR+LLI  EQLS PTPKLP  G   SVSFP+ GGN KFN+ PQ+  E EE  LT+ A+E KE+SK +  M   +
Subjt:  HHSSHCDTDRFSGFQPWNTEGFDLKKKRRLLI--EQLSLPTPKLPCLG-LRSVSFPHGGGNSKFNKKPQEGEEGEESTLTEIAIEGKEMSKGQVQMKGEK

Query:  DKLQWSYGPEEDLLEFGSQGHSCIYEQCCSDTAQSLLLPTESKHDFVLSSGRWSADP--EAESKTIKPTIDQEFEQYFSVLL
          L  SYG  EDLLEFGS    C                 +SKHDFVLSSGRW+ DP  EAESKT+KPTIDQEFEQYFSVLL
Subjt:  DKLQWSYGPEEDLLEFGSQGHSCIYEQCCSDTAQSLLLPTESKHDFVLSSGRWSADP--EAESKTIKPTIDQEFEQYFSVLL

A0A6J1GGJ6 protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE-like6.6e-6367.01Show/hide
Query:  MDQNNHNHHHSSHCDTDRFSGFQPWNTEGFDLKKKRRLLIEQLSLPTPKLPCLG--LRSVSFPHGGGNSKFNKK-PQEGEEGEESTLTEIAIEGKEMSKG
        MDQ NH  HH SH  T  FS FQPW+TE FD+KKKR+LL EQLSLPTPKLPC G    S+SFP+G  + KFNKK P+EG    ES+LT++A EGK+MS  
Subjt:  MDQNNHNHHHSSHCDTDRFSGFQPWNTEGFDLKKKRRLLIEQLSLPTPKLPCLG--LRSVSFPHGGGNSKFNKK-PQEGEEGEESTLTEIAIEGKEMSKG

Query:  QVQMKGE----KDKLQWSYGPEEDLLEFGSQGHSCIYEQCCSDTAQSLLLPTESKHDFVLSSGRWSADPEAESKTIKPTIDQEFEQYFSVLLPSLDP
        +V+++GE    KDKL  +YG EEDLLEFGS G+S IYE  CSD+ Q+LLLPT+S HDFVLSSGRWS DPEAESK I PTIDQEFEQYFS +LPSLDP
Subjt:  QVQMKGE----KDKLQWSYGPEEDLLEFGSQGHSCIYEQCCSDTAQSLLLPTESKHDFVLSSGRWSADPEAESKTIKPTIDQEFEQYFSVLLPSLDP

A0A6J1IMA5 protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE-like2.2e-5866.32Show/hide
Query:  MDQNNHNHHHSSHCDTDRFSGFQPWNTEGFDLKKKRRLLIEQLSLPTPKLPCLG--LRSVSFPHGGGNSKFNKKPQEGEEGEESTLTEIAIEGKEMSKGQ
        MDQ NH  HH SH  T  FSGFQPW+TE FD+KKKR+LL EQLSLPTPKLPC G    S+SFP+G  + KFNKK +  EEG ES+LT++A    E  + Q
Subjt:  MDQNNHNHHHSSHCDTDRFSGFQPWNTEGFDLKKKRRLLIEQLSLPTPKLPCLG--LRSVSFPHGGGNSKFNKKPQEGEEGEESTLTEIAIEGKEMSKGQ

Query:  VQMKGEKDKLQWSYGPEEDLLEFGSQGHSCIYEQCCSDTAQSLLLPTESKHD-FVLSSGRWSADPEAESKTIKPTIDQEFEQYFSVLLPSLDP
         +  G KDKL  +YG EEDLLEFGS G+S IYEQCCSD+ Q+LLLPT+S HD FVLSSGRWS DPEAESK + P IDQEFEQYFS +LPSLDP
Subjt:  VQMKGEKDKLQWSYGPEEDLLEFGSQGHSCIYEQCCSDTAQSLLLPTESKHD-FVLSSGRWSADPEAESKTIKPTIDQEFEQYFSVLLPSLDP

SwissProt top hitse value%identityAlignment
A8MR65 Protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE2.1e-0554.17Show/hide
Query:  QSLLLPTESKHDFVLSSGRWS-ADPEAESKTIKPTIDQEFEQYFSVLL
        Q +L P ES   ++LSS RWS ++ +++  T KPTIDQEFEQYFS L+
Subjt:  QSLLLPTESKHDFVLSSGRWS-ADPEAESKTIKPTIDQEFEQYFSVLL

Q8S4Q6 Protein FAR-RED ELONGATED HYPOCOTYL 13.5e-0531.58Show/hide
Query:  EGFDLKKKRRLLIEQLS----LPTPKLPCLGLRSVSFPHGGGNSKFNKKPQEGEEGEESTLTEI--AIEGKEMSK---GQVQMKGEKDKLQWSYGPE--E
        E  ++ KKR+   +Q      LP  K  C    + S  +  GNS+ + +         +T  E    IE KE S    G+ +M   +  L + YG +  E
Subjt:  EGFDLKKKRRLLIEQLS----LPTPKLPCLGLRSVSFPHGGGNSKFNKKPQEGEEGEESTLTEI--AIEGKEMSK---GQVQMKGEKDKLQWSYGPE--E

Query:  DLLEFGSQGHSCIYEQCCSDTAQSLLLPTESKHDFVLSSGRWSA--DPEAESKTIKPTIDQEFEQYFSVLL
        D  E   +    + EQ   +  +     + +   FVLSSGRW+   D     +T KPTIDQEFEQYFS L+
Subjt:  DLLEFGSQGHSCIYEQCCSDTAQSLLLPTESKHDFVLSSGRWSA--DPEAESKTIKPTIDQEFEQYFSVLL

Arabidopsis top hitse value%identityAlignment
AT2G37678.1 far-red elongated hypocotyl 12.5e-0631.58Show/hide
Query:  EGFDLKKKRRLLIEQLS----LPTPKLPCLGLRSVSFPHGGGNSKFNKKPQEGEEGEESTLTEI--AIEGKEMSK---GQVQMKGEKDKLQWSYGPE--E
        E  ++ KKR+   +Q      LP  K  C    + S  +  GNS+ + +         +T  E    IE KE S    G+ +M   +  L + YG +  E
Subjt:  EGFDLKKKRRLLIEQLS----LPTPKLPCLGLRSVSFPHGGGNSKFNKKPQEGEEGEESTLTEI--AIEGKEMSK---GQVQMKGEKDKLQWSYGPE--E

Query:  DLLEFGSQGHSCIYEQCCSDTAQSLLLPTESKHDFVLSSGRWSA--DPEAESKTIKPTIDQEFEQYFSVLL
        D  E   +    + EQ   +  +     + +   FVLSSGRW+   D     +T KPTIDQEFEQYFS L+
Subjt:  DLLEFGSQGHSCIYEQCCSDTAQSLLLPTESKHDFVLSSGRWSA--DPEAESKTIKPTIDQEFEQYFSVLL

AT5G02200.1 far-red-elongated hypocotyl1-like1.5e-0654.17Show/hide
Query:  QSLLLPTESKHDFVLSSGRWS-ADPEAESKTIKPTIDQEFEQYFSVLL
        Q +L P ES   ++LSS RWS ++ +++  T KPTIDQEFEQYFS L+
Subjt:  QSLLLPTESKHDFVLSSGRWS-ADPEAESKTIKPTIDQEFEQYFSVLL

AT5G02200.2 far-red-elongated hypocotyl1-like1.5e-0654.17Show/hide
Query:  QSLLLPTESKHDFVLSSGRWS-ADPEAESKTIKPTIDQEFEQYFSVLL
        Q +L P ES   ++LSS RWS ++ +++  T KPTIDQEFEQYFS L+
Subjt:  QSLLLPTESKHDFVLSSGRWS-ADPEAESKTIKPTIDQEFEQYFSVLL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCTGCTTGGCTTCCATCTTTCTTTCTTCAACATCGACAATGGATCAAAACAACCATAACCATCATCATTCGTCTCACTGTGACACTGACAGATTTTCTGGC
TTCCAACCATGGAATACAGAAGGCTTTGATTTGAAGAAGAAAAGAAGACTGCTAATTGAGCAACTAAGTCTACCCACACCAAAGCTACCGTGTTTGGGTTTAAGA
TCAGTTAGCTTTCCCCATGGAGGAGGTAACTCCAAGTTTAACAAAAAACCTCAAGAAGGAGAAGAAGGAGAAGAAAGCACTCTTACAGAAATAGCAATAGAAGGT
AAGGAGATGTCCAAAGGGCAGGTTCAAATGAAGGGTGAGAAAGACAAGTTGCAGTGGAGCTATGGCCCTGAGGAAGATCTATTGGAGTTTGGAAGCCAAGGACAT
AGCTGCATTTATGAGCAATGTTGCAGTGACACTGCTCAAAGCTTGCTCCTCCCCACAGAGTCCAAGCATGACTTTGTTTTGTCATCTGGGAGATGGAGCGCAGAC
CCAGAGGCAGAATCCAAGACTATCAAACCAACTATTGATCAAGAGTTTGAGCAGTACTTTTCTGTGCTTTTGCCATCCTTGGATCCTTGA
mRNA sequenceShow/hide mRNA sequence
GCCTCTCTTTCCCAACCCTTTCACTTTCTTTTATTTATCAACACGATCGAAGCAAATGGTCTGCTTGGCTTCCATCTTTCTTTCTTCAACATCGACAATGGATCA
AAACAACCATAACCATCATCATTCGTCTCACTGTGACACTGACAGATTTTCTGGCTTCCAACCATGGAATACAGAAGGCTTTGATTTGAAGAAGAAAAGAAGACT
GCTAATTGAGCAACTAAGTCTACCCACACCAAAGCTACCGTGTTTGGGTTTAAGATCAGTTAGCTTTCCCCATGGAGGAGGTAACTCCAAGTTTAACAAAAAACC
TCAAGAAGGAGAAGAAGGAGAAGAAAGCACTCTTACAGAAATAGCAATAGAAGGTAAGGAGATGTCCAAAGGGCAGGTTCAAATGAAGGGTGAGAAAGACAAGTT
GCAGTGGAGCTATGGCCCTGAGGAAGATCTATTGGAGTTTGGAAGCCAAGGACATAGCTGCATTTATGAGCAATGTTGCAGTGACACTGCTCAAAGCTTGCTCCT
CCCCACAGAGTCCAAGCATGACTTTGTTTTGTCATCTGGGAGATGGAGCGCAGACCCAGAGGCAGAATCCAAGACTATCAAACCAACTATTGATCAAGAGTTTGA
GCAGTACTTTTCTGTGCTTTTGCCATCCTTGGATCCTTGAATCCGTTCTGTATCTACTTTCAAGGAATTTGAAAGTGTGTGGTGCGTTTAGAGATGAAAGTGTTT
CACCAAGTGTGCGACAATTCAATCCAAGTGATGATGTCTGTGAATGTGAGATGAAGTGAATGAGATTCTACCGAACCGTTTTACGCAATTCAATTGATTTCAAAA
TTATTTCCTCCAACATTTTCCAACCAAATTCTCATTCACAACACATATGCTGAAGTTTTGCCTATAAGAAATCAGGTAATAAATCTATGCCCTAGGAACAACAAG
AAACCGC
Protein sequenceShow/hide protein sequence
MVCLASIFLSSTSTMDQNNHNHHHSSHCDTDRFSGFQPWNTEGFDLKKKRRLLIEQLSLPTPKLPCLGLRSVSFPHGGGNSKFNKKPQEGEEGEESTLTEIAIEG
KEMSKGQVQMKGEKDKLQWSYGPEEDLLEFGSQGHSCIYEQCCSDTAQSLLLPTESKHDFVLSSGRWSADPEAESKTIKPTIDQEFEQYFSVLLPSLDP