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CaUC04G076030 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC04G076030
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
Descriptioncytochrome b-c1 complex subunit 9-like
Genome locationCiama_Chr04:25251235..25254275
RNA-Seq ExpressionCaUC04G076030
SyntenyCaUC04G076030
Gene Ontology termsGO:0006122 - mitochondrial electron transport, ubiquinol to cytochrome c (biological process)
GO:0005750 - mitochondrial respiratory chain complex III (cellular component)
InterPro domainsIPR008027 - Cytochrome b-c1 complex subunit 9
IPR036656 - Cytochrome b-c1 complex subunit 9 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022132374.1 cytochrome b-c1 complex subunit 9-like [Momordica charantia]1.3e-2258.12Show/hide
Query:  MDSAARRSGGGLLEGLYRVIMRRNSVYVTFIIAGAFVGERIVSVVLIDSLGISGTVGAGTILFVGNWHCNLEHAASLLNLVPLMQAVDYGVHKLWERNNI
        MDSAARR GGGLLEGLYRVIMRRNSVYVTFIIAGAFVGER                                             AVDYGVHKLWE NN+
Subjt:  MDSAARRSGGGLLEGLYRVIMRRNSVYVTFIIAGAFVGERIVSVVLIDSLGISGTVGAGTILFVGNWHCNLEHAASLLNLVPLMQAVDYGVHKLWERNNI

Query:  GKRYEDISVLGQRQSEE
        GKRYEDISVLGQR SEE
Subjt:  GKRYEDISVLGQRQSEE

XP_022144609.1 cytochrome b-c1 complex subunit 9-like [Momordica charantia]6.0e-2358.12Show/hide
Query:  MDSAARRSGGGLLEGLYRVIMRRNSVYVTFIIAGAFVGERIVSVVLIDSLGISGTVGAGTILFVGNWHCNLEHAASLLNLVPLMQAVDYGVHKLWERNNI
        M+SA RRSGGGLLEGLYRVIMRRNSVYVTFIIAGAFVGER                                             AVDYGVHKLWE NN+
Subjt:  MDSAARRSGGGLLEGLYRVIMRRNSVYVTFIIAGAFVGERIVSVVLIDSLGISGTVGAGTILFVGNWHCNLEHAASLLNLVPLMQAVDYGVHKLWERNNI

Query:  GKRYEDISVLGQRQSEE
        GKRYEDISVLGQRQSEE
Subjt:  GKRYEDISVLGQRQSEE

XP_023543185.1 cytochrome b-c1 complex subunit 9-like [Cucurbita pepo subsp. pepo]2.3e-2257.26Show/hide
Query:  MDSAARRSGGGLLEGLYRVIMRRNSVYVTFIIAGAFVGERIVSVVLIDSLGISGTVGAGTILFVGNWHCNLEHAASLLNLVPLMQAVDYGVHKLWERNNI
        MD AARRSGGGLLEGLYRVIMRRNSVYVTFIIAGAF GER                                             AVDYGVHKLWE NN+
Subjt:  MDSAARRSGGGLLEGLYRVIMRRNSVYVTFIIAGAFVGERIVSVVLIDSLGISGTVGAGTILFVGNWHCNLEHAASLLNLVPLMQAVDYGVHKLWERNNI

Query:  GKRYEDISVLGQRQSEE
        GKRY+DISVLGQRQSEE
Subjt:  GKRYEDISVLGQRQSEE

XP_038881020.1 cytochrome b-c1 complex subunit 9-like isoform X3 [Benincasa hispida]4.6e-2358.97Show/hide
Query:  MDSAARRSGGGLLEGLYRVIMRRNSVYVTFIIAGAFVGERIVSVVLIDSLGISGTVGAGTILFVGNWHCNLEHAASLLNLVPLMQAVDYGVHKLWERNNI
        MDSAARRSGGGLLEGLYRVIMRRNSVYVTFIIAGAFVGER                                             AVDYGVHKLWE NN+
Subjt:  MDSAARRSGGGLLEGLYRVIMRRNSVYVTFIIAGAFVGERIVSVVLIDSLGISGTVGAGTILFVGNWHCNLEHAASLLNLVPLMQAVDYGVHKLWERNNI

Query:  GKRYEDISVLGQRQSEE
        GKRYEDISVLGQR SEE
Subjt:  GKRYEDISVLGQRQSEE

XP_038881369.1 cytochrome b-c1 complex subunit 9-like [Benincasa hispida]1.4e-2460.68Show/hide
Query:  MDSAARRSGGGLLEGLYRVIMRRNSVYVTFIIAGAFVGERIVSVVLIDSLGISGTVGAGTILFVGNWHCNLEHAASLLNLVPLMQAVDYGVHKLWERNNI
        MDSAARRSGGGLLEGLYRVIMRRNSVYVTFIIAGAFVGER                                             AVDYGVHKLWERNN+
Subjt:  MDSAARRSGGGLLEGLYRVIMRRNSVYVTFIIAGAFVGERIVSVVLIDSLGISGTVGAGTILFVGNWHCNLEHAASLLNLVPLMQAVDYGVHKLWERNNI

Query:  GKRYEDISVLGQRQSEE
        GKRYEDISVLGQRQSEE
Subjt:  GKRYEDISVLGQRQSEE

TrEMBL top hitse value%identityAlignment
A0A540LD49 Uncharacterized protein1.1e-2246.63Show/hide
Query:  MDSAARRSGGGLLEGLYRVIMRRNSVYVTFIIAGAFVGER--IVSVVLID--------------SLGISGTV---GAGTILF------------------
        MDSAARRSGGGL EGLYRVIMRRNSVYVTF+IAGAF+GER  +  + +ID              S+G+ GT+     GT+++                  
Subjt:  MDSAARRSGGGLLEGLYRVIMRRNSVYVTFIIAGAFVGER--IVSVVLID--------------SLGISGTV---GAGTILF------------------

Query:  ---------VGNWHCNLEHAASLLNLVPLMQAVDYGVHKLWERNNIGKRYEDISVLGQRQSEE
                 +G  H     ++          AVDYGVHKLWE NN+GKRYEDISVLG RQSEE
Subjt:  ---------VGNWHCNLEHAASLLNLVPLMQAVDYGVHKLWERNNIGKRYEDISVLGQRQSEE

A0A5N5I7J7 Cytochrome b-c1 complex subunit 9-like1.1e-2256.41Show/hide
Query:  MDSAARRSGGGLLEGLYRVIMRRNSVYVTFIIAGAFVGERIVSVVLIDSLGISGTVGAGTILFVGNWHCNLEHAASLLNLVPLMQAVDYGVHKLWERNNI
        MDSAARRSGGGL EGLYRVIMRRNSVYVTF+IAGAF+GER                                             AVDYGVHKLWE NN+
Subjt:  MDSAARRSGGGLLEGLYRVIMRRNSVYVTFIIAGAFVGERIVSVVLIDSLGISGTVGAGTILFVGNWHCNLEHAASLLNLVPLMQAVDYGVHKLWERNNI

Query:  GKRYEDISVLGQRQSEE
        GKRYEDISVLG RQSEE
Subjt:  GKRYEDISVLGQRQSEE

A0A6J1BSW3 cytochrome b-c1 complex subunit 9-like6.5e-2358.12Show/hide
Query:  MDSAARRSGGGLLEGLYRVIMRRNSVYVTFIIAGAFVGERIVSVVLIDSLGISGTVGAGTILFVGNWHCNLEHAASLLNLVPLMQAVDYGVHKLWERNNI
        MDSAARR GGGLLEGLYRVIMRRNSVYVTFIIAGAFVGER                                             AVDYGVHKLWE NN+
Subjt:  MDSAARRSGGGLLEGLYRVIMRRNSVYVTFIIAGAFVGERIVSVVLIDSLGISGTVGAGTILFVGNWHCNLEHAASLLNLVPLMQAVDYGVHKLWERNNI

Query:  GKRYEDISVLGQRQSEE
        GKRYEDISVLGQR SEE
Subjt:  GKRYEDISVLGQRQSEE

A0A6J1CST4 cytochrome b-c1 complex subunit 9-like2.9e-2358.12Show/hide
Query:  MDSAARRSGGGLLEGLYRVIMRRNSVYVTFIIAGAFVGERIVSVVLIDSLGISGTVGAGTILFVGNWHCNLEHAASLLNLVPLMQAVDYGVHKLWERNNI
        M+SA RRSGGGLLEGLYRVIMRRNSVYVTFIIAGAFVGER                                             AVDYGVHKLWE NN+
Subjt:  MDSAARRSGGGLLEGLYRVIMRRNSVYVTFIIAGAFVGERIVSVVLIDSLGISGTVGAGTILFVGNWHCNLEHAASLLNLVPLMQAVDYGVHKLWERNNI

Query:  GKRYEDISVLGQRQSEE
        GKRYEDISVLGQRQSEE
Subjt:  GKRYEDISVLGQRQSEE

A0A6J1I6G5 cytochrome b-c1 complex subunit 9-like1.5e-2257.26Show/hide
Query:  MDSAARRSGGGLLEGLYRVIMRRNSVYVTFIIAGAFVGERIVSVVLIDSLGISGTVGAGTILFVGNWHCNLEHAASLLNLVPLMQAVDYGVHKLWERNNI
        MDSAARRSGGGL EGLYRVIMRRNSVYVTFIIAGAF+GER                                             AVDYGVHKLWE NN+
Subjt:  MDSAARRSGGGLLEGLYRVIMRRNSVYVTFIIAGAFVGERIVSVVLIDSLGISGTVGAGTILFVGNWHCNLEHAASLLNLVPLMQAVDYGVHKLWERNNI

Query:  GKRYEDISVLGQRQSEE
        GKRYEDISVLGQR SEE
Subjt:  GKRYEDISVLGQRQSEE

SwissProt top hitse value%identityAlignment
P46270 Cytochrome b-c1 complex subunit 91.9e-1947.01Show/hide
Query:  MDSAARRSGGGLLEGLYRVIMRRNSVYVTFIIAGAFVGERIVSVVLIDSLGISGTVGAGTILFVGNWHCNLEHAASLLNLVPLMQAVDYGVHKLWERNNI
        M+SAARRSGGG+LEG YR++MRR  VYVTF+IAGA +GER                                             AVDYGV  LWE+NN+
Subjt:  MDSAARRSGGGLLEGLYRVIMRRNSVYVTFIIAGAFVGERIVSVVLIDSLGISGTVGAGTILFVGNWHCNLEHAASLLNLVPLMQAVDYGVHKLWERNNI

Query:  GKRYEDISVLGQRQSEE
        GKRYEDISVLGQR  +E
Subjt:  GKRYEDISVLGQRQSEE

Q9LXJ2 Cytochrome b-c1 complex subunit 9, mitochondrial6.5e-2049.57Show/hide
Query:  MDSAARRSGGGLLEGLYRVIMRRNSVYVTFIIAGAFVGERIVSVVLIDSLGISGTVGAGTILFVGNWHCNLEHAASLLNLVPLMQAVDYGVHKLWERNNI
        M+ AARR+  G  EG Y++IMRRNSVYVTFIIAGAF GER                                             AVDYGVHKLWERNN+
Subjt:  MDSAARRSGGGLLEGLYRVIMRRNSVYVTFIIAGAFVGERIVSVVLIDSLGISGTVGAGTILFVGNWHCNLEHAASLLNLVPLMQAVDYGVHKLWERNNI

Query:  GKRYEDISVLGQRQSEE
        GKRYEDISVLGQR  EE
Subjt:  GKRYEDISVLGQRQSEE

Arabidopsis top hitse value%identityAlignment
AT3G52730.1 ubiquinol-cytochrome C reductase UQCRX/QCR9-like family protein4.6e-2149.57Show/hide
Query:  MDSAARRSGGGLLEGLYRVIMRRNSVYVTFIIAGAFVGERIVSVVLIDSLGISGTVGAGTILFVGNWHCNLEHAASLLNLVPLMQAVDYGVHKLWERNNI
        M+ AARR+  G  EG Y++IMRRNSVYVTFIIAGAF GER                                             AVDYGVHKLWERNN+
Subjt:  MDSAARRSGGGLLEGLYRVIMRRNSVYVTFIIAGAFVGERIVSVVLIDSLGISGTVGAGTILFVGNWHCNLEHAASLLNLVPLMQAVDYGVHKLWERNNI

Query:  GKRYEDISVLGQRQSEE
        GKRYEDISVLGQR  EE
Subjt:  GKRYEDISVLGQRQSEE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTCTGCAGCTCGTAGGAGCGGAGGAGGCCTCCTTGAAGGGCTTTACAGAGTTATTATGCGCCGGAATTCCGTTTATGTCACCTTCATTATCGCCGGCGCTTTTGT
TGGCGAGCGGATCGTTTCTGTTGTGTTAATCGATTCTCTTGGCATTAGCGGTACTGTAGGTGCAGGAACCATTCTTTTTGTGGGAAATTGGCACTGCAACTTGGAGCATG
CTGCCTCTTTACTCAATTTGGTTCCCCTGATGCAGGCTGTTGATTATGGCGTTCACAAGCTCTGGGAACGCAACAACATTGGGAAACGATATGAGGATATTTCAGTTTTG
GGGCAAAGGCAATCAGAAGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGATTGTTTGAAGTTTGAGAGATAATGAAATGGAATGTGAACGATCACTTAGTGAAAGTAGTTAAAAAGCGTCATTTTAGTGTTTTAAACTTGGGAGTATAACCGGTAT
TTTACATAGAAAAAAGAAGAGAAGCCCTACGAATCGAATTACGTAGATCAGAGGAAGAAGGTGAGGCCAATACATCACGCTAATGGATTCTGCAGCTCGTAGGAGCGGAG
GAGGCCTCCTTGAAGGGCTTTACAGAGTTATTATGCGCCGGAATTCCGTTTATGTCACCTTCATTATCGCCGGCGCTTTTGTTGGCGAGCGGATCGTTTCTGTTGTGTTA
ATCGATTCTCTTGGCATTAGCGGTACTGTAGGTGCAGGAACCATTCTTTTTGTGGGAAATTGGCACTGCAACTTGGAGCATGCTGCCTCTTTACTCAATTTGGTTCCCCT
GATGCAGGCTGTTGATTATGGCGTTCACAAGCTCTGGGAACGCAACAACATTGGGAAACGATATGAGGATATTTCAGTTTTGGGGCAAAGGCAATCAGAAGAATGATATT
CTCCCAATGATTTTGTTATGTATAATTTGTTGTCACGAACAACTAATCATCTGAGTCATCTTCTTGAAATAAGTTTTACATGTTCAATTTTGTCCCACCCTCTTTCTTAA
GCACTTGGTGGGTTGACCTTTAAGCTTTCCATGTGGTTTTCTTCCGGTTAATTTTTCAAAACTATCACAACCTTACTTGGACAAGATCTGTTCGGTAGGTTGTACATCTG
TCCTTGAGTTCTGACTTTTGCAAATTATCGTTCAAATGTTCCTGTCTTCACAGAGTGTTCTAGATTCAGGGATTGTTTGCTCATTAATTTTATGAGGAAGAATCGAAATT
AAAAGTAGCGATG
Protein sequenceShow/hide protein sequence
MDSAARRSGGGLLEGLYRVIMRRNSVYVTFIIAGAFVGERIVSVVLIDSLGISGTVGAGTILFVGNWHCNLEHAASLLNLVPLMQAVDYGVHKLWERNNIGKRYEDISVL
GQRQSEE