; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CaUC04G076680 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC04G076680
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionUnknown protein
Genome locationCiama_Chr04:25998797..26013375
RNA-Seq ExpressionCaUC04G076680
SyntenyCaUC04G076680
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PPD99490.1 hypothetical protein GOBAR_DD03504 [Gossypium barbadense]2.5e-0660Show/hide
Query:  TPTARKAAHARPAPSPNRLVKVEAIQSVESTLVVGL-CCSTFDGAGFSCSDEELLRDGDGEGVCGGWEGG
        TPTARKA HARPAP P RLVK EAIQSV ST+VVGL    +    G  CSDE ++  GDG G+ G   GG
Subjt:  TPTARKAAHARPAPSPNRLVKVEAIQSVESTLVVGL-CCSTFDGAGFSCSDEELLRDGDGEGVCGGWEGG
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGCGAGTTTTGATCTGTTCGGAGACTACACCAACGGCGAGAAAAGCAGCCCACGCAAGGCCAGCGCCGAGCCCGAATCGCCTTGTTAAAGTTGAAGCAATC
CAATCCGTAGAGTCTACATTGGTGGTAGGCCTCTGTTGCTCCACCTTTGATGGGGCTGGTTTTAGTTGCTCCGACGAAGAATTGCTCAGAGATGGAGATGGGGAG
GGAGTTTGCGGCGGTTGGGAAGGTGGGGTTGAAGGTGAAGGGGATCTAAATTGTCTGGGATGTCAAGACGGCGATGCTGAAAGCCAACAGCACCAACAACTTGCA
TTGGGTTCATTCCTCCCCATGGTTCATTTCTCAGCACTTCTGGAGCCATCCACTCAGCCTGAAGAGATTCGCCAGAAATGTCCTGGTCTAGAAACCTCTTCACAG
CTACCTCCTGCAAAAACAGATGGTGGTTATAAGAACATCGCAATGCATGGATTAGCAGTTAGTACCAAGCCCAATACGCTCTCCCAAGGAGATTTCTTCCCATGG
GATCTCGCATTCTGCAACATCATCAAGATTGTTGCAACCACTGCAGCAGCAGTGGCAGTGGCAGCAGCTGCTACAGGAATTTCAAGATTTGCATCGGTACTCTTT
GCTGCAGCTACCACCATTGATGATGCAACAACAGCTGCGGCAGCTGCTGCTGCTGCAGCAACAGGTACATTTCTCCCATACTTCACTGGTGTTACCTCAAAAGGC
TATAGGTTGTCCGGCTGCTTCTCTTGGATCAAGAGAAAGGTTAAATTCCAGAGGTTTAAGGTGCAGTTGTTGGCCATGGGTAGGGCTGGCTCTAGAATGCATTCT
GGGCTGAGGCAAGGGAGGCAAAAAGTTAGCTGGACGAGGATCATTCTTATCTACACTTTCACAGAGACCAGGCACCTTTCTACTTTGATCCTTGTCTTCCAAAGT
GGACTGGCTGAAAAAGGGGATCCATCATACTCTACATGCGATCCAGCAACATCAGCTGGAATAAGTGCACCAGGATCTGCCATTAAATCCACAATGTACTCCCTA
GAATTCAACGGATCAGAATTTCAGACACGATCTTTGACTTTGCAATCCCAAATAAATAAGACAAAAATTGGGGATTCCGTCCCCATTTTGATAGCCATCTCCAAT
GCTGTCTGTTCAAGTTTCAACAAGTTAGCATCAGCAGCTTTATTAATCAGAACTGCTTCCCAAGTGACACTGTCAGACATTGGTGCTCCTTGCAGATCAACTAGG
GAAGGCATTCTTTCTGAGGTGGACTCAGTGAAGACTCCATATAGGAGAGACCATGGAAGTAATAACCATCTTGAACCTTTCCACCAAAACAAAGCTGATACAATG
GAACCACCTTCACGCTCATTGAAGGGTCAAACATTGATTGACAGAGATTGGCTCCCACTCTACCCCTTCCAGGTGAAAAACAGGATTCATTGA
mRNA sequenceShow/hide mRNA sequence
ATGATGCGAGTTTTGATCTGTTCGGAGACTACACCAACGGCGAGAAAAGCAGCCCACGCAAGGCCAGCGCCGAGCCCGAATCGCCTTGTTAAAGTTGAAGCAATC
CAATCCGTAGAGTCTACATTGGTGGTAGGCCTCTGTTGCTCCACCTTTGATGGGGCTGGTTTTAGTTGCTCCGACGAAGAATTGCTCAGAGATGGAGATGGGGAG
GGAGTTTGCGGCGGTTGGGAAGGTGGGGTTGAAGGTGAAGGGGATCTAAATTGTCTGGGATGTCAAGACGGCGATGCTGAAAGCCAACAGCACCAACAACTTGCA
TTGGGTTCATTCCTCCCCATGGTTCATTTCTCAGCACTTCTGGAGCCATCCACTCAGCCTGAAGAGATTCGCCAGAAATGTCCTGGTCTAGAAACCTCTTCACAG
CTACCTCCTGCAAAAACAGATGGTGGTTATAAGAACATCGCAATGCATGGATTAGCAGTTAGTACCAAGCCCAATACGCTCTCCCAAGGAGATTTCTTCCCATGG
GATCTCGCATTCTGCAACATCATCAAGATTGTTGCAACCACTGCAGCAGCAGTGGCAGTGGCAGCAGCTGCTACAGGAATTTCAAGATTTGCATCGGTACTCTTT
GCTGCAGCTACCACCATTGATGATGCAACAACAGCTGCGGCAGCTGCTGCTGCTGCAGCAACAGGTACATTTCTCCCATACTTCACTGGTGTTACCTCAAAAGGC
TATAGGTTGTCCGGCTGCTTCTCTTGGATCAAGAGAAAGGTTAAATTCCAGAGGTTTAAGGTGCAGTTGTTGGCCATGGGTAGGGCTGGCTCTAGAATGCATTCT
GGGCTGAGGCAAGGGAGGCAAAAAGTTAGCTGGACGAGGATCATTCTTATCTACACTTTCACAGAGACCAGGCACCTTTCTACTTTGATCCTTGTCTTCCAAAGT
GGACTGGCTGAAAAAGGGGATCCATCATACTCTACATGCGATCCAGCAACATCAGCTGGAATAAGTGCACCAGGATCTGCCATTAAATCCACAATGTACTCCCTA
GAATTCAACGGATCAGAATTTCAGACACGATCTTTGACTTTGCAATCCCAAATAAATAAGACAAAAATTGGGGATTCCGTCCCCATTTTGATAGCCATCTCCAAT
GCTGTCTGTTCAAGTTTCAACAAGTTAGCATCAGCAGCTTTATTAATCAGAACTGCTTCCCAAGTGACACTGTCAGACATTGGTGCTCCTTGCAGATCAACTAGG
GAAGGCATTCTTTCTGAGGTGGACTCAGTGAAGACTCCATATAGGAGAGACCATGGAAGTAATAACCATCTTGAACCTTTCCACCAAAACAAAGCTGATACAATG
GAACCACCTTCACGCTCATTGAAGGGTCAAACATTGATTGACAGAGATTGGCTCCCACTCTACCCCTTCCAGGTGAAAAACAGGATTCATTGA
Protein sequenceShow/hide protein sequence
MMRVLICSETTPTARKAAHARPAPSPNRLVKVEAIQSVESTLVVGLCCSTFDGAGFSCSDEELLRDGDGEGVCGGWEGGVEGEGDLNCLGCQDGDAESQQHQQLA
LGSFLPMVHFSALLEPSTQPEEIRQKCPGLETSSQLPPAKTDGGYKNIAMHGLAVSTKPNTLSQGDFFPWDLAFCNIIKIVATTAAAVAVAAAATGISRFASVLF
AAATTIDDATTAAAAAAAAATGTFLPYFTGVTSKGYRLSGCFSWIKRKVKFQRFKVQLLAMGRAGSRMHSGLRQGRQKVSWTRIILIYTFTETRHLSTLILVFQS
GLAEKGDPSYSTCDPATSAGISAPGSAIKSTMYSLEFNGSEFQTRSLTLQSQINKTKIGDSVPILIAISNAVCSSFNKLASAALLIRTASQVTLSDIGAPCRSTR
EGILSEVDSVKTPYRRDHGSNNHLEPFHQNKADTMEPPSRSLKGQTLIDRDWLPLYPFQVKNRIH