; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CaUC04G077190 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC04G077190
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionS-protein homolog
Genome locationCiama_Chr04:26530552..26534981
RNA-Seq ExpressionCaUC04G077190
SyntenyCaUC04G077190
Gene Ontology termsNA
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GAV64192.1 Self-incomp_S1 domain-containing protein, partial [Cephalotus follicularis]1.7e-3241.4Show/hide
Query:  NLVVHCKSKDDDLGEHVLSPRGKYYWTFKENFWQTTLFWCNFNSKHGHAIGNVFWPESDTL--LTDNCDNNVCSW----------AAGELDPLSSWQVTI
        N+ +HCKSK+DDLG HV+S    Y W FK NFWQTTLF+C F ++ G  + +++    D L  L D    N C W          AA     L+   V I
Subjt:  NLVVHCKSKDDDLGEHVLSPRGKYYWTFKENFWQTTLFWCNFNSKHGHAIGNVFWPESDTL--LTDNCDNNVCSW----------AAGELDPLSSWQVTI

Query:  WNQMNDSSLVVHCKSKDDDLGEHGLSPRSKYNWTFKENIWQTTLFWCNFSSKYGHVTCNVFWPESETFLTDNCDNNICNWAAKDLG
         N+M DS++ +HCKSKDDDLG H LS    Y W F+ N+W+TTLF+C F++K G    N++    +      C  + C W  KD G
Subjt:  WNQMNDSSLVVHCKSKDDDLGEHGLSPRSKYNWTFKENIWQTTLFWCNFSSKYGHVTCNVFWPESETFLTDNCDNNICNWAAKDLG

KAE8646229.1 hypothetical protein Csa_016318 [Cucumis sativus]3.6e-3533.46Show/hide
Query:  KLSSWQVTIWNNLKDSNLVVHCKSKDDDLGEHVLSPRGKYY-WTFKENFWQTTLFWCNFNSKHGHAIGNVFWPE--SDTLLTDNC-DNNVCSWAAGE---
        ++ SW V+I N L   +L VHC+SK+DDLG H L  RG  Y W FKENFW TTLFWC       +     FWPE  S+T L D C     C W A +   
Subjt:  KLSSWQVTIWNNLKDSNLVVHCKSKDDDLGEHVLSPRGKYY-WTFKENFWQTTLFWCNFNSKHGHAIGNVFWPE--SDTLLTDNC-DNNVCSWAAGE---

Query:  ------------------------LDPLSSWQVT-------------------------IWNQMNDSSLVVHCKSKDDDLG-EHGLSPRSKYNWTFKENI
                                 + +  W +T                         + N + +  +  HC+SKDDDLG +H +    ++ W FKEN 
Subjt:  ------------------------LDPLSSWQVT-------------------------IWNQMNDSSLVVHCKSKDDDLG-EHGLSPRSKYNWTFKENI

Query:  WQTTLFWCNFSSKYGHVTCNVFWPE-SETFLTDNC-DNNICNWAAKDLGIYFHYHTLRTYKLVYPW
        W+TTLFWC       +V+ +VFWPE    +L D C    +C W+A+D GIY      ++ ++V+ W
Subjt:  WQTTLFWCNFSSKYGHVTCNVFWPE-SETFLTDNC-DNNICNWAAKDLGIYFHYHTLRTYKLVYPW

KAE8648119.1 hypothetical protein Csa_004728 [Cucumis sativus]4.6e-3839.73Show/hide
Query:  ESKLQDKLSSWQVTIWNNL-KDSNLVVHCKSKDDDLGEHVLSPRGKYYWTFKENFWQTTLFWCNFNSKHG-HAIGNVFWPESDTLLTDNCDNNVCSWAAG
        +SK    LS W V I N L  +  L VHCKSKDD+LG+HV+     Y W F+EN +QTTLFWC   +    H    V+W E    L   C+  +C W A 
Subjt:  ESKLQDKLSSWQVTIWNNL-KDSNLVVHCKSKDDDLGEHVLSPRGKYYWTFKENFWQTTLFWCNFNSKHG-HAIGNVFWPESDTLLTDNCDNNVCSWAAG

Query:  E-----------------LDPLSSWQVTIWNQM-NDSSLVVHCKSKDDDLGEHGLSPRSKYNWTFKENIWQTTLFWCNF-SSKYGHVTCNVFWPESETFL
        +                     S W V I N++ ++  L VHCKSKDD+LG+H +     Y W FKEN  +TTLFWC   + K  H T  VFW E   +L
Subjt:  E-----------------LDPLSSWQVTIWNQM-NDSSLVVHCKSKDDDLGEHGLSPRSKYNWTFKENIWQTTLFWCNF-SSKYGHVTCNVFWPESETFL

Query:  TDNCDNNICNWAAKDLGIYFHYHT
           C+   C W A+D G YF  +T
Subjt:  TDNCDNNICNWAAKDLGIYFHYHT

XP_023522257.1 S-protein homolog 1-like, partial [Cucurbita pepo subsp. pepo]3.2e-3162.89Show/hide
Query:  ESKLQDKLSSWQVTIWNNLKDSNLVVHCKSKDDDLGEHVLSPRGKYYWTFKENFWQTTLFWCNFNSKHGHAIGNVFWPESDTLLTDNCDNNVCSWAA
        +SK Q  LS W+V I N++KDS L+ HCKSK+DDLGEHV+ P GKYYW F EN WQ+TLFWCNF+SKHG A G VFWP++   L D C +N C WAA
Subjt:  ESKLQDKLSSWQVTIWNNLKDSNLVVHCKSKDDDLGEHVLSPRGKYYWTFKENFWQTTLFWCNFNSKHGHAIGNVFWPESDTLLTDNCDNNVCSWAA

XP_023542206.1 S-protein homolog 74-like [Cucurbita pepo subsp. pepo]3.7e-3254.78Show/hide
Query:  LDPLSSWQVTIWNQMNDSSLVVHCKSKDDDLGEHGLSPRSKYNWTFKENIWQTTLFWCNFSSKYGHVTCNVFWPESETFLTDNCDNNICNWAAKDLGIYF
        +D  S+W+V I N + DS+LV HCKSK DDLGEH + P  KY W F EN+WQTTL+WCNFSSK G  +  VFWPE   +L+D C+ N C W AKD GI  
Subjt:  LDPLSSWQVTIWNQMNDSSLVVHCKSKDDDLGEHGLSPRSKYNWTFKENIWQTTLFWCNFSSKYGHVTCNVFWPESETFLTDNCDNNICNWAAKDLGIYF

Query:  HYHTLRTYKLVYPWQ
               Y+LVYPW+
Subjt:  HYHTLRTYKLVYPWQ

TrEMBL top hitse value%identityAlignment
A0A1Q3B8T3 S-protein homolog (Fragment)8.1e-3341.4Show/hide
Query:  NLVVHCKSKDDDLGEHVLSPRGKYYWTFKENFWQTTLFWCNFNSKHGHAIGNVFWPESDTL--LTDNCDNNVCSW----------AAGELDPLSSWQVTI
        N+ +HCKSK+DDLG HV+S    Y W FK NFWQTTLF+C F ++ G  + +++    D L  L D    N C W          AA     L+   V I
Subjt:  NLVVHCKSKDDDLGEHVLSPRGKYYWTFKENFWQTTLFWCNFNSKHGHAIGNVFWPESDTL--LTDNCDNNVCSW----------AAGELDPLSSWQVTI

Query:  WNQMNDSSLVVHCKSKDDDLGEHGLSPRSKYNWTFKENIWQTTLFWCNFSSKYGHVTCNVFWPESETFLTDNCDNNICNWAAKDLG
         N+M DS++ +HCKSKDDDLG H LS    Y W F+ N+W+TTLF+C F++K G    N++    +      C  + C W  KD G
Subjt:  WNQMNDSSLVVHCKSKDDDLGEHGLSPRSKYNWTFKENIWQTTLFWCNFSSKYGHVTCNVFWPESETFLTDNCDNNICNWAAKDLG

A0A6J1GQZ0 S-protein homolog4.5e-3154.78Show/hide
Query:  LDPLSSWQVTIWNQMNDSSLVVHCKSKDDDLGEHGLSPRSKYNWTFKENIWQTTLFWCNFSSKYGHVTCNVFWPESETFLTDNCDNNICNWAAKDLGIYF
        +D  S+W+V I N + DS+LV HCKSKDDDLGEH + P  KY W F EN+ QTTL+WCNFSSK G     VFWPE   +L+D C+ N C W AKD GI  
Subjt:  LDPLSSWQVTIWNQMNDSSLVVHCKSKDDDLGEHGLSPRSKYNWTFKENIWQTTLFWCNFSSKYGHVTCNVFWPESETFLTDNCDNNICNWAAKDLGIYF

Query:  HYHTLRTYKLVYPWQ
               Y+LVYPW+
Subjt:  HYHTLRTYKLVYPWQ

A0A6J1GSD6 S-protein homolog4.5e-3154.78Show/hide
Query:  LDPLSSWQVTIWNQMNDSSLVVHCKSKDDDLGEHGLSPRSKYNWTFKENIWQTTLFWCNFSSKYGHVTCNVFWPESETFLTDNCDNNICNWAAKDLGIYF
        +D  S+W+V I N + DS+LVVHCKSKDDDLGEH +    KY W F EN+ QTTL+WCNFSSK G  +  VFWPE   +L+D C+ N C W AKD GI  
Subjt:  LDPLSSWQVTIWNQMNDSSLVVHCKSKDDDLGEHGLSPRSKYNWTFKENIWQTTLFWCNFSSKYGHVTCNVFWPESETFLTDNCDNNICNWAAKDLGIYF

Query:  HYHTLRTYKLVYPWQ
               Y+LVYPW+
Subjt:  HYHTLRTYKLVYPWQ

A0A6J1GSZ3 S-protein homolog1.5e-3154.78Show/hide
Query:  LDPLSSWQVTIWNQMNDSSLVVHCKSKDDDLGEHGLSPRSKYNWTFKENIWQTTLFWCNFSSKYGHVTCNVFWPESETFLTDNCDNNICNWAAKDLGIYF
        +D  S+W+V I N + DS+LV HCKSKDDDLGEH + P  KY W F EN+ QTTL+WCNFSSK G  +  VFWPE   +L+D C+ N C W AKD GI  
Subjt:  LDPLSSWQVTIWNQMNDSSLVVHCKSKDDDLGEHGLSPRSKYNWTFKENIWQTTLFWCNFSSKYGHVTCNVFWPESETFLTDNCDNNICNWAAKDLGIYF

Query:  HYHTLRTYKLVYPWQ
               Y+LVYPW+
Subjt:  HYHTLRTYKLVYPWQ

A0A6J1KR58 S-protein homolog1.5e-3155.75Show/hide
Query:  PLSSWQVTIWNQMNDSSLVVHCKSKDDDLGEHGLSPRSKYNWTFKENIWQTTLFWCNFSSKYGHVTCNVFWPESETFLTDNCDNNICNWAAKDLGIYFHY
        P S WQVTI+N M DS+L+VHCKSKD+DLG H +     Y   FKENIWQTT FWC+FSSKYG VT +VFWPE  + L+D C+++ C W+A+D GI+   
Subjt:  PLSSWQVTIWNQMNDSSLVVHCKSKDDDLGEHGLSPRSKYNWTFKENIWQTTLFWCNFSSKYGHVTCNVFWPESETFLTDNCDNNICNWAAKDLGIYFHY

Query:  HTLRTYKLVYPWQ
         ++ +Y+L YPW+
Subjt:  HTLRTYKLVYPWQ

SwissProt top hitse value%identityAlignment
F4JLQ5 S-protein homolog 26.0e-0929.2Show/hide
Query:  PLSSWQVTIWNQM-NDSSLVVHCKSKDDDLGEHGLSPRSKYNWTFKENIWQTTLFWCNFSSKYGHVTCNVFWPESETFLTDNCDNNICNWAAKDLGIYFH
        P S   V I N + N  +L+ HCKSKDDDLG   L P   ++++F    +  TL++C+FS      + +++    ++   + C+++ C W  +  G    
Subjt:  PLSSWQVTIWNQM-NDSSLVVHCKSKDDDLGEHGLSPRSKYNWTFKENIWQTTLFWCNFSSKYGHVTCNVFWPESETFLTDNCDNNICNWAAKDLGIYFH

Query:  YHTLRTYKLVYPW
            + + L YPW
Subjt:  YHTLRTYKLVYPW

F4JLS0 S-protein homolog 13.5e-1742.27Show/hide
Query:  LSSWQVTIWNQM-NDSSLVVHCKSKDDDLGEHGLSPRSKYNWTFKENIWQTTLFWCNFSSKYGHVTCNVFWPESETFLTDNCDNNICNWAAKDLGIY
        +S WQVT+ N +    +L +HCKSK+DDLGE  L  R++++W F EN+  +T FWC  +   GH+  NVFW   +  L   C    C W AK  G+Y
Subjt:  LSSWQVTIWNQM-NDSSLVVHCKSKDDDLGEHGLSPRSKYNWTFKENIWQTTLFWCNFSSKYGHVTCNVFWPESETFLTDNCDNNICNWAAKDLGIY

O23020 S-protein homolog 51.0e-0835.53Show/hide
Query:  VTIWNNLKDSNLVVHCKSKDDDLGEHVLSPRGKYYWTFKENFWQTTLFWCNFNSKHGHAIGNVFWPESDTLLTDNC
        VT+ N +    L +HCKSK DDLG HV+  + +Y++ F+ N W++TLF+C+F         +++  + D  + D+C
Subjt:  VTIWNNLKDSNLVVHCKSKDDDLGEHVLSPRGKYYWTFKENFWQTTLFWCNFNSKHGHAIGNVFWPESDTLLTDNC

Q2HQ46 S-protein homolog 742.3e-1641.24Show/hide
Query:  LSSWQVTIWNQM-NDSSLVVHCKSKDDDLGEHGLSPRSKYNWTFKENIWQTTLFWCNFSSKYGHVTCNVFWPESETFLTDNCDNNICNWAAKDLGIY
        +S WQVT+ N +    +L +HCKSK++DLG+  L    +++W F EN+  +TLFWC  S   GH+   VFW   +  L   CD   C W AK+ G+Y
Subjt:  LSSWQVTIWNQM-NDSSLVVHCKSKDDDLGEHGLSPRSKYNWTFKENIWQTTLFWCNFSSKYGHVTCNVFWPESETFLTDNCDNNICNWAAKDLGIY

Q9LW22 S-protein homolog 211.6e-0934.82Show/hide
Query:  VTIWNQMNDSS---LVVHCKSKDDDLGEHGLSPRSKYNWTFKENIWQTTLFWCNF-----SSKYGHVTCNVFWPESETFLTDNCDNNICNWAAKDLGIYF
        +T+ N++N  +   L VHCKSK++D+G   L      +++FK N W TT FWCN        +Y  +T    +     F     D +  NW A+D GIYF
Subjt:  VTIWNQMNDSS---LVVHCKSKDDDLGEHGLSPRSKYNWTFKENIWQTTLFWCNF-----SSKYGHVTCNVFWPESETFLTDNCDNNICNWAAKDLGIYF

Query:  HYHTLRTYKLVY
        H  +L +Y   Y
Subjt:  HYHTLRTYKLVY

Arabidopsis top hitse value%identityAlignment
AT1G04645.1 Plant self-incompatibility protein S1 family7.3e-1035.53Show/hide
Query:  VTIWNNLKDSNLVVHCKSKDDDLGEHVLSPRGKYYWTFKENFWQTTLFWCNFNSKHGHAIGNVFWPESDTLLTDNC
        VT+ N +    L +HCKSK DDLG HV+  + +Y++ F+ N W++TLF+C+F         +++  + D  + D+C
Subjt:  VTIWNNLKDSNLVVHCKSKDDDLGEHVLSPRGKYYWTFKENFWQTTLFWCNFNSKHGHAIGNVFWPESDTLLTDNC

AT3G26880.1 Plant self-incompatibility protein S1 family1.1e-1034.82Show/hide
Query:  VTIWNQMNDSS---LVVHCKSKDDDLGEHGLSPRSKYNWTFKENIWQTTLFWCNF-----SSKYGHVTCNVFWPESETFLTDNCDNNICNWAAKDLGIYF
        +T+ N++N  +   L VHCKSK++D+G   L      +++FK N W TT FWCN        +Y  +T    +     F     D +  NW A+D GIYF
Subjt:  VTIWNQMNDSS---LVVHCKSKDDDLGEHGLSPRSKYNWTFKENIWQTTLFWCNF-----SSKYGHVTCNVFWPESETFLTDNCDNNICNWAAKDLGIYF

Query:  HYHTLRTYKLVY
        H  +L +Y   Y
Subjt:  HYHTLRTYKLVY

AT4G16195.1 Plant self-incompatibility protein S1 family4.3e-1029.2Show/hide
Query:  PLSSWQVTIWNQM-NDSSLVVHCKSKDDDLGEHGLSPRSKYNWTFKENIWQTTLFWCNFSSKYGHVTCNVFWPESETFLTDNCDNNICNWAAKDLGIYFH
        P S   V I N + N  +L+ HCKSKDDDLG   L P   ++++F    +  TL++C+FS      + +++    ++   + C+++ C W  +  G    
Subjt:  PLSSWQVTIWNQM-NDSSLVVHCKSKDDDLGEHGLSPRSKYNWTFKENIWQTTLFWCNFSSKYGHVTCNVFWPESETFLTDNCDNNICNWAAKDLGIYFH

Query:  YHTLRTYKLVYPW
            + + L YPW
Subjt:  YHTLRTYKLVYPW

AT4G16295.1 S-protein homologue 12.5e-1842.27Show/hide
Query:  LSSWQVTIWNQM-NDSSLVVHCKSKDDDLGEHGLSPRSKYNWTFKENIWQTTLFWCNFSSKYGHVTCNVFWPESETFLTDNCDNNICNWAAKDLGIY
        +S WQVT+ N +    +L +HCKSK+DDLGE  L  R++++W F EN+  +T FWC  +   GH+  NVFW   +  L   C    C W AK  G+Y
Subjt:  LSSWQVTIWNQM-NDSSLVVHCKSKDDDLGEHGLSPRSKYNWTFKENIWQTTLFWCNFSSKYGHVTCNVFWPESETFLTDNCDNNICNWAAKDLGIY

AT4G29035.1 Plant self-incompatibility protein S1 family1.6e-1741.24Show/hide
Query:  LSSWQVTIWNQM-NDSSLVVHCKSKDDDLGEHGLSPRSKYNWTFKENIWQTTLFWCNFSSKYGHVTCNVFWPESETFLTDNCDNNICNWAAKDLGIY
        +S WQVT+ N +    +L +HCKSK++DLG+  L    +++W F EN+  +TLFWC  S   GH+   VFW   +  L   CD   C W AK+ G+Y
Subjt:  LSSWQVTIWNQM-NDSSLVVHCKSKDDDLGEHGLSPRSKYNWTFKENIWQTTLFWCNFSSKYGHVTCNVFWPESETFLTDNCDNNICNWAAKDLGIY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGCCTCCAAACAAATTGTGCTTCATCTTATTGGTAGCTTTGGAATCAAACATGATTATTATGACATGTTTAGCACAATCCAAGGTACAACTTCCATTGTCCCCATG
GCAAGTGAGCATTTTGAATGATTTGATGGATTCAACTTTGGTAGTTCATTGCAAGTCAAAAGACGATGATTTAGGAGAGCATGTGATAAGAAGCAAATATGGGCAAGTTT
CTGGTGACGTTTTCTGGCCAGAAAGCGGAAGTCGTCTTAGTGATCAATGTGAAGAATCCAAACTACAAGATAAATTGTCATCATGGCAAGTGACGATTTGGAACAATTTG
AAGGATTCAAATCTAGTAGTTCATTGCAAGTCAAAAGACGACGATCTAGGCGAGCACGTGCTGAGCCCTAGAGGCAAATACTACTGGACGTTTAAAGAAAATTTTTGGCA
AACCACATTGTTTTGGTGCAATTTTAATAGCAAACATGGACATGCTATTGGTAATGTTTTTTGGCCAGAATCTGATACCCTTCTCACTGATAATTGTGACAATAATGTTT
GCAGTTGGGCTGCTGGAGAACTTGATCCATTGTCGTCATGGCAAGTGACGATTTGGAATCAGATGAATGATTCGAGTTTGGTAGTTCATTGCAAATCGAAAGACGACGAT
TTGGGTGAACACGGGTTGAGCCCTAGAAGCAAATACAACTGGACGTTTAAAGAAAATATTTGGCAAACCACACTGTTTTGGTGCAATTTTAGTAGCAAATATGGGCATGT
TACTTGTAATGTTTTTTGGCCAGAATCTGAAACCTTTCTCACTGATAATTGTGACAACAATATTTGCAATTGGGCTGCTAAAGACCTTGGTATTTACTTCCATTATCATA
CTCTCAGAACCTATAAATTAGTGTACCCTTGGCAATGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGCCTCCAAACAAATTGTGCTTCATCTTATTGGTAGCTTTGGAATCAAACATGATTATTATGACATGTTTAGCACAATCCAAGGTACAACTTCCATTGTCCCCATG
GCAAGTGAGCATTTTGAATGATTTGATGGATTCAACTTTGGTAGTTCATTGCAAGTCAAAAGACGATGATTTAGGAGAGCATGTGATAAGAAGCAAATATGGGCAAGTTT
CTGGTGACGTTTTCTGGCCAGAAAGCGGAAGTCGTCTTAGTGATCAATGTGAAGAATCCAAACTACAAGATAAATTGTCATCATGGCAAGTGACGATTTGGAACAATTTG
AAGGATTCAAATCTAGTAGTTCATTGCAAGTCAAAAGACGACGATCTAGGCGAGCACGTGCTGAGCCCTAGAGGCAAATACTACTGGACGTTTAAAGAAAATTTTTGGCA
AACCACATTGTTTTGGTGCAATTTTAATAGCAAACATGGACATGCTATTGGTAATGTTTTTTGGCCAGAATCTGATACCCTTCTCACTGATAATTGTGACAATAATGTTT
GCAGTTGGGCTGCTGGAGAACTTGATCCATTGTCGTCATGGCAAGTGACGATTTGGAATCAGATGAATGATTCGAGTTTGGTAGTTCATTGCAAATCGAAAGACGACGAT
TTGGGTGAACACGGGTTGAGCCCTAGAAGCAAATACAACTGGACGTTTAAAGAAAATATTTGGCAAACCACACTGTTTTGGTGCAATTTTAGTAGCAAATATGGGCATGT
TACTTGTAATGTTTTTTGGCCAGAATCTGAAACCTTTCTCACTGATAATTGTGACAACAATATTTGCAATTGGGCTGCTAAAGACCTTGGTATTTACTTCCATTATCATA
CTCTCAGAACCTATAAATTAGTGTACCCTTGGCAATGA
Protein sequenceShow/hide protein sequence
MKPPNKLCFILLVALESNMIIMTCLAQSKVQLPLSPWQVSILNDLMDSTLVVHCKSKDDDLGEHVIRSKYGQVSGDVFWPESGSRLSDQCEESKLQDKLSSWQVTIWNNL
KDSNLVVHCKSKDDDLGEHVLSPRGKYYWTFKENFWQTTLFWCNFNSKHGHAIGNVFWPESDTLLTDNCDNNVCSWAAGELDPLSSWQVTIWNQMNDSSLVVHCKSKDDD
LGEHGLSPRSKYNWTFKENIWQTTLFWCNFSSKYGHVTCNVFWPESETFLTDNCDNNICNWAAKDLGIYFHYHTLRTYKLVYPWQ