; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CaUC04G077660 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC04G077660
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
Descriptiontranscription factor TCP13-like
Genome locationCiama_Chr04:27078634..27084360
RNA-Seq ExpressionCaUC04G077660
SyntenyCaUC04G077660
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0043565 - sequence-specific DNA binding (molecular function)
InterPro domainsIPR017887 - Transcription factor TCP subgroup


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6584403.1 Transcription factor TCP5, partial [Cucurbita argyrosperma subsp. sororia]9.2e-8174.11Show/hide
Query:  RVNNMISKLKEEGVHDEAKQMEGKRKKA------FLRGNPRIFRVSPLFGGKDRHSKVCTIKGLRDRRIRLSVPTAIQLYDLQNKLGLSQPSKVIDWLID
        RVNNMISKLK+EGVH EAKQMEGKRKK       FLRGNPRIFRVSPLFGGKDRHSKVCT+KGLRDRRIRLS PTAIQLYDLQN+LGLSQPSKVIDWLID
Subjt:  RVNNMISKLKEEGVHDEAKQMEGKRKKA------FLRGNPRIFRVSPLFGGKDRHSKVCTIKGLRDRRIRLSVPTAIQLYDLQNKLGLSQPSKVIDWLID

Query:  VTRFEIDKLPPLHFPKDFDQNASILHHSSLLFPQIPHFDIADAAVKAKNEETDHRLLLHKLS------SLSALQVQTNAINGNCCHFEPPSFPFPLMDQI
        VTRF+IDKLPPLHFPKDFD NAS LH          H DI+DAA KAK+EET   LLL KLS      S SALQ++TNA+  NCCHF+PPSFPFPLMDQ 
Subjt:  VTRFEIDKLPPLHFPKDFDQNASILHHSSLLFPQIPHFDIADAAVKAKNEETDHRLLLHKLS------SLSALQVQTNAINGNCCHFEPPSFPFPLMDQI

Query:  NPVSFS-------FCPLTMPSEVN
        NP SFS       F PLTMP EV+
Subjt:  NPVSFS-------FCPLTMPSEVN

KAG7019990.1 Transcription factor TCP5, partial [Cucurbita argyrosperma subsp. argyrosperma]1.5e-14775Show/hide
Query:  MAKASSSLIQTLKRYIKKPWEITGPCADPEYRSAVPSALEYRVFCPATTKEKAIVPTSNPETVFDIKYYTRDQRRNRPPIRRTILKKPDVEKMMKETKFD
        MAKASSS  QTLKRYIKKPWEITGPCADPEY+ AVPSA+EYRVFCPATTKEKAIVPTSNPETVFDIKYYTRDQRRNRPPIRRTILKKPDVEKMMKETKFD
Subjt:  MAKASSSLIQTLKRYIKKPWEITGPCADPEYRSAVPSALEYRVFCPATTKEKAIVPTSNPETVFDIKYYTRDQRRNRPPIRRTILKKPDVEKMMKETKFD

Query:  PADFPKVYLTAAIEEDINARGGGYQNNAISCNDSKRKISDIIKLSFHQKLQERVNNMISKLKEEGVHDEAKQMEGKRKKA------FLRGNPRIFRVSPL
        PADFPKVYLTAAIEEDINARGG                          ++  RVNNMISKLK+EGVH EAKQMEGKRKK       FLRGNPRIFRVSPL
Subjt:  PADFPKVYLTAAIEEDINARGGGYQNNAISCNDSKRKISDIIKLSFHQKLQERVNNMISKLKEEGVHDEAKQMEGKRKKA------FLRGNPRIFRVSPL

Query:  FGGKDRHSKVCTIKGLRDRRIRLSVPTAIQLYDLQNKLGLSQPSKVIDWLIDVTRFEIDKLPPLHFPKDFDQNASILHHSSLLFPQIPHFDIADAAVKAK
        FGGKDRHSKVCT+KGLRDRRIRLS PTAIQLYDLQN+LGLS+PSKVIDWLIDVTRF+IDKLPPLHFPKDFD NAS LH          H DI+DAA KAK
Subjt:  FGGKDRHSKVCTIKGLRDRRIRLSVPTAIQLYDLQNKLGLSQPSKVIDWLIDVTRFEIDKLPPLHFPKDFDQNASILHHSSLLFPQIPHFDIADAAVKAK

Query:  NEETDHRLLLHKLS------SLSALQVQTNAINGNCCHFEPPSFPFPLMDQINPVSFS-------FCPLTMPSEVN
        +EET   LLL KLS      S SALQ++TNA+  NCCHF+PPSFPFPLMDQ NP SFS       F PLTMP EV+
Subjt:  NEETDHRLLLHKLS------SLSALQVQTNAINGNCCHFEPPSFPFPLMDQINPVSFS-------FCPLTMPSEVN

XP_023001048.1 transcription factor TCP13-like [Cucurbita maxima]3.2e-8174.55Show/hide
Query:  RVNNMISKLKEEGVHDEAKQMEGKRKKA------FLRGNPRIFRVSPLFGGKDRHSKVCTIKGLRDRRIRLSVPTAIQLYDLQNKLGLSQPSKVIDWLID
        RVNNMISKLK+EGVH EAKQMEGKRKK       FLRGNPRIFRVSPLFGGKDRHSKVCT+KGLRDRRIRLS PTAIQLYDLQN+LGLSQPSKVIDWL+D
Subjt:  RVNNMISKLKEEGVHDEAKQMEGKRKKA------FLRGNPRIFRVSPLFGGKDRHSKVCTIKGLRDRRIRLSVPTAIQLYDLQNKLGLSQPSKVIDWLID

Query:  VTRFEIDKLPPLHFPKDFDQNASILHHSSLLFPQIPHFDIADAAVKAKNEETDHRLLLHKLS------SLSALQVQTNAINGNCCHFEPPSFPFPLMDQI
        VTRF+IDKLPPLHFPKDFD NAS LH          HFDIADAA KAK+EET   LLL K S      S SALQ+QTNA+  NCCHF+PPSFPFPLMDQ 
Subjt:  VTRFEIDKLPPLHFPKDFDQNASILHHSSLLFPQIPHFDIADAAVKAKNEETDHRLLLHKLS------SLSALQVQTNAINGNCCHFEPPSFPFPLMDQI

Query:  NPVSFS-------FCPLTMPSEVN
        NP SFS       F PLTMP EV+
Subjt:  NPVSFS-------FCPLTMPSEVN

XP_023519980.1 transcription factor TCP13-like [Cucurbita pepo subsp. pepo]2.0e-8073.66Show/hide
Query:  RVNNMISKLKEEGVHDEAKQMEGKRKKA------FLRGNPRIFRVSPLFGGKDRHSKVCTIKGLRDRRIRLSVPTAIQLYDLQNKLGLSQPSKVIDWLID
        RVNNMISKLK+EGVH EAKQMEGKRKK       FLRGNPRIFRVSPLFGGKDRHSKVCT+KGLRDRRIRLS PTAIQLYDLQN+LGLSQPSKVIDWLID
Subjt:  RVNNMISKLKEEGVHDEAKQMEGKRKKA------FLRGNPRIFRVSPLFGGKDRHSKVCTIKGLRDRRIRLSVPTAIQLYDLQNKLGLSQPSKVIDWLID

Query:  VTRFEIDKLPPLHFPKDFDQNASILHHSSLLFPQIPHFDIADAAVKAKNEETDHRLLLHKLS------SLSALQVQTNAINGNCCHFEPPSFPFPLMDQI
        VTRF+IDKLPPLHFPKDFD NAS LH          H DIADA  KAK+EET   LLL KLS      S SALQ+QTNA+  NCCHF+PPSFPFPLMDQ 
Subjt:  VTRFEIDKLPPLHFPKDFDQNASILHHSSLLFPQIPHFDIADAAVKAKNEETDHRLLLHKLS------SLSALQVQTNAINGNCCHFEPPSFPFPLMDQI

Query:  NPVSFS-------FCPLTMPSEVN
        NP SFS       F P+T+P EV+
Subjt:  NPVSFS-------FCPLTMPSEVN

XP_038895251.1 transcription factor PCF6 [Benincasa hispida]3.6e-10191.54Show/hide
Query:  MISKLKEEGVHDEAKQMEGKRKKAFLRGNPRIFRVSPLFGGKDRHSKVCTIKGLRDRRIRLSVPTAIQLYDLQNKLGLSQPSKVIDWLIDVTRFEIDKLP
        MISKL +EGVHDEAKQMEGKRKKAFLRGNPRI RVS LFGGKDRHSKVCT+KGLRDRRIRLSVPTAIQLYDLQNKLGLSQPSKVIDWLIDVTRFEIDKLP
Subjt:  MISKLKEEGVHDEAKQMEGKRKKAFLRGNPRIFRVSPLFGGKDRHSKVCTIKGLRDRRIRLSVPTAIQLYDLQNKLGLSQPSKVIDWLIDVTRFEIDKLP

Query:  PLHFPKDFDQNASILHHSSLLFPQIPHFDIADAAVKAKNEETDHRLLLHKLSSLSALQVQTNAINGNCCHFEPPSFPFPLMDQINPVSFSFCPLTMPSEV
        PLHFPKDFD NASILHHSSL  PQIPHFDIADAAV AKNEETD RLLLHKLSSLSALQVQTNAI  NCCHF+PPSFPFPLMDQ +P SFSFCPLTMPSEV
Subjt:  PLHFPKDFDQNASILHHSSLLFPQIPHFDIADAAVKAKNEETDHRLLLHKLSSLSALQVQTNAINGNCCHFEPPSFPFPLMDQINPVSFSFCPLTMPSEV

Query:  N
        +
Subjt:  N

TrEMBL top hitse value%identityAlignment
A0A0A0LTI3 TCP domain-containing protein4.9e-7275Show/hide
Query:  MISKLKEEGVHDEAKQMEGKRKKA--------FLRGNPRIFRVSPLFGGKDRHSKVCTIKGLRDRRIRLSVPTAIQLYDLQNKLGLSQPSKVIDWLIDVT
        MISKLKEEG HDEAKQ +GK KKA        FLRGNPRIFRVSP FGGKDRHSKVCTIKGLRDRRIRLS+PTAIQLYDLQNKLGLSQPSKVIDWLIDVT
Subjt:  MISKLKEEGVHDEAKQMEGKRKKA--------FLRGNPRIFRVSPLFGGKDRHSKVCTIKGLRDRRIRLSVPTAIQLYDLQNKLGLSQPSKVIDWLIDVT

Query:  RFEIDKLPPLHFPKDFDQNASILHHSSLLFPQIPHFDIADAAVKAKNEETDHRLLLHKLSSLSALQVQTNAINGNCCHFEPPSFPFPLM-DQINPVSFSF
        RFEIDKLPPL FPKDFD NASILHHS          DI DAA KAKNEETDH LL           VQTN ING C HFEPP+FPFP M DQ N   FSF
Subjt:  RFEIDKLPPLHFPKDFDQNASILHHSSLLFPQIPHFDIADAAVKAKNEETDHRLLLHKLSSLSALQVQTNAINGNCCHFEPPSFPFPLM-DQINPVSFSF

A0A1S3BEN2 transcription factor TCP54.2e-7174.5Show/hide
Query:  MISKLKEEGVHDEAKQMEGKRKKA--------FLRGNPRIFRVSPLFGGKDRHSKVCTIKGLRDRRIRLSVPTAIQLYDLQNKLGLSQPSKVIDWLIDVT
        MISKLKE+G HDEAKQMEGKRKKA        FLRGNPRIFRVSP FGGKDRHSKVCTIKGLRDRRIRLS+PTAIQLYDLQNKLGLSQPSKVIDWLIDVT
Subjt:  MISKLKEEGVHDEAKQMEGKRKKA--------FLRGNPRIFRVSPLFGGKDRHSKVCTIKGLRDRRIRLSVPTAIQLYDLQNKLGLSQPSKVIDWLIDVT

Query:  RFEIDKLPPLHFPKDFDQNASILHHSSLLFPQIPHFDIADAA-VKAKNEETDHRLLLHKLSSLSALQVQTNAINGNCCHFEPPSFPFPLMDQINPVSFSF
        RFEIDKLPPLHFPKDFD NASILHHS +           DAA +KAKNEETD  LL           VQTN ING+  HFEPPSFPFP M Q N   FSF
Subjt:  RFEIDKLPPLHFPKDFDQNASILHHSSLLFPQIPHFDIADAA-VKAKNEETDHRLLLHKLSSLSALQVQTNAINGNCCHFEPPSFPFPLMDQINPVSFSF

A0A5D3BIQ9 Transcription factor TCP54.2e-7174.5Show/hide
Query:  MISKLKEEGVHDEAKQMEGKRKKA--------FLRGNPRIFRVSPLFGGKDRHSKVCTIKGLRDRRIRLSVPTAIQLYDLQNKLGLSQPSKVIDWLIDVT
        MISKLKE+G HDEAKQMEGKRKKA        FLRGNPRIFRVSP FGGKDRHSKVCTIKGLRDRRIRLS+PTAIQLYDLQNKLGLSQPSKVIDWLIDVT
Subjt:  MISKLKEEGVHDEAKQMEGKRKKA--------FLRGNPRIFRVSPLFGGKDRHSKVCTIKGLRDRRIRLSVPTAIQLYDLQNKLGLSQPSKVIDWLIDVT

Query:  RFEIDKLPPLHFPKDFDQNASILHHSSLLFPQIPHFDIADAA-VKAKNEETDHRLLLHKLSSLSALQVQTNAINGNCCHFEPPSFPFPLMDQINPVSFSF
        RFEIDKLPPLHFPKDFD NASILHHS +           DAA +KAKNEETD  LL           VQTN ING+  HFEPPSFPFP M Q N   FSF
Subjt:  RFEIDKLPPLHFPKDFDQNASILHHSSLLFPQIPHFDIADAA-VKAKNEETDHRLLLHKLSSLSALQVQTNAINGNCCHFEPPSFPFPLMDQINPVSFSF

A0A6J1E7C6 transcription factor PCF8-like1.9e-7973.66Show/hide
Query:  RVNNMISKLKEEGVHDEAKQMEGKRKKA------FLRGNPRIFRVSPLFGGKDRHSKVCTIKGLRDRRIRLSVPTAIQLYDLQNKLGLSQPSKVIDWLID
        RVNNMIS+LK EGVH EAKQMEGKRKK       FLRGNPRIFRVSPLFGGKDRHSKVCT+KGLRDRRIRLS PTAIQLYDLQN+LGLSQPSKVIDWLID
Subjt:  RVNNMISKLKEEGVHDEAKQMEGKRKKA------FLRGNPRIFRVSPLFGGKDRHSKVCTIKGLRDRRIRLSVPTAIQLYDLQNKLGLSQPSKVIDWLID

Query:  VTRFEIDKLPPLHFPKDFDQNASILHHSSLLFPQIPHFDIADAAVKAKNEETDHRLLLHKLS------SLSALQVQTNAINGNCCHFEPPSFPFPLMDQI
        VTR +IDKLPPLHFPKDFD NAS L           H DIADAA KAK+EET   LLL KLS      S SALQ+QTNA+  NCCHF+PPSFPFPLMDQ 
Subjt:  VTRFEIDKLPPLHFPKDFDQNASILHHSSLLFPQIPHFDIADAAVKAKNEETDHRLLLHKLS------SLSALQVQTNAINGNCCHFEPPSFPFPLMDQI

Query:  NPVSFS-------FCPLTMPSEVN
        NP SFS       F PLTMP EV+
Subjt:  NPVSFS-------FCPLTMPSEVN

A0A6J1KPD9 transcription factor TCP13-like1.5e-8174.55Show/hide
Query:  RVNNMISKLKEEGVHDEAKQMEGKRKKA------FLRGNPRIFRVSPLFGGKDRHSKVCTIKGLRDRRIRLSVPTAIQLYDLQNKLGLSQPSKVIDWLID
        RVNNMISKLK+EGVH EAKQMEGKRKK       FLRGNPRIFRVSPLFGGKDRHSKVCT+KGLRDRRIRLS PTAIQLYDLQN+LGLSQPSKVIDWL+D
Subjt:  RVNNMISKLKEEGVHDEAKQMEGKRKKA------FLRGNPRIFRVSPLFGGKDRHSKVCTIKGLRDRRIRLSVPTAIQLYDLQNKLGLSQPSKVIDWLID

Query:  VTRFEIDKLPPLHFPKDFDQNASILHHSSLLFPQIPHFDIADAAVKAKNEETDHRLLLHKLS------SLSALQVQTNAINGNCCHFEPPSFPFPLMDQI
        VTRF+IDKLPPLHFPKDFD NAS LH          HFDIADAA KAK+EET   LLL K S      S SALQ+QTNA+  NCCHF+PPSFPFPLMDQ 
Subjt:  VTRFEIDKLPPLHFPKDFDQNASILHHSSLLFPQIPHFDIADAAVKAKNEETDHRLLLHKLS------SLSALQVQTNAINGNCCHFEPPSFPFPLMDQI

Query:  NPVSFS-------FCPLTMPSEVN
        NP SFS       F PLTMP EV+
Subjt:  NPVSFS-------FCPLTMPSEVN

SwissProt top hitse value%identityAlignment
A2XMN1 Transcription factor PCF65.5e-2047.5Show/hide
Query:  RIFRVSPLFGGKDRHSKVCTIKGLRDRRIRLSVPTAIQLYDLQNKLGLSQPSKVIDWLIDVTRFEIDKLPPLHFPKDFDQNASILHHSSLLFPQIPHFDI
        RI+RV    GGKDRHSKV T KG+RDRR+RLSV TAIQ YDLQ++LG  QPSK I+WLI+     ID LP L                   F  IPH   
Subjt:  RIFRVSPLFGGKDRHSKVCTIKGLRDRRIRLSVPTAIQLYDLQNKLGLSQPSKVIDWLIDVTRFEIDKLPPLHFPKDFDQNASILHHSSLLFPQIPHFDI

Query:  ADAAVKAKNEETDHRLLLHK
        ADAA   +  +   + L +K
Subjt:  ADAAVKAKNEETDHRLLLHK

Q9C758 Transcription factor TCP241.2e-1963.41Show/hide
Query:  RIFRVSPLFGGKDRHSKVCTIKGLRDRRIRLSVPTAIQLYDLQNKLGLSQPSKVIDWLIDVTRFEIDKLPPLHFPKD-FDQN
        RI RVS   GGKDRHSKV T KGLRDRRIRLSV TAIQ YDLQ++LG  QPSK ++WLI+     I  LP L+   D  DQN
Subjt:  RIFRVSPLFGGKDRHSKVCTIKGLRDRRIRLSVPTAIQLYDLQNKLGLSQPSKVIDWLIDVTRFEIDKLPPLHFPKD-FDQN

Q9FME3 Transcription factor TCP51.8e-3157.5Show/hide
Query:  HQKLQERVNNMISKLKEEGVHDEAKQMEGKRKKAFLRGNPRIFRVSPLFGGKDRHSKVCTIKGLRDRRIRLSVPTAIQLYDLQNKLGLSQPSKVIDWLID
        +Q  Q  +N+M+ + +   V    +     R       NPRI RVS  FGGKDRHSKVCT++GLRDRRIRLSVPTAIQLYDLQ++LGLSQPSKVIDWL++
Subjt:  HQKLQERVNNMISKLKEEGVHDEAKQMEGKRKKAFLRGNPRIFRVSPLFGGKDRHSKVCTIKGLRDRRIRLSVPTAIQLYDLQNKLGLSQPSKVIDWLID

Query:  VTRFEIDKLPPLHFPKDFDQ
          + ++DKLPPL FP  F+Q
Subjt:  VTRFEIDKLPPLHFPKDFDQ

Q9LEZ9 Transcription factor TCP171.0e-2974.39Show/hide
Query:  NPRIFRVSPLFGGKDRHSKVCTIKGLRDRRIRLSVPTAIQLYDLQNKLGLSQPSKVIDWLIDVTRFEIDKLPPLHFPKDFDQ
        NPRI RVS  FGGKDRHSKVCT++GLRDRRIRLSV TAIQ+YDLQ +LGLSQPSKVIDWL++V + ++D LPPL FP  F Q
Subjt:  NPRIFRVSPLFGGKDRHSKVCTIKGLRDRRIRLSVPTAIQLYDLQNKLGLSQPSKVIDWLIDVTRFEIDKLPPLHFPKDFDQ

Q9S7W5 Transcription factor TCP132.5e-2865.96Show/hide
Query:  NPRIFRVSPLFGGKDRHSKVCTIKGLRDRRIRLSVPTAIQLYDLQNKLGLSQPSKVIDWLIDVTRFEIDKLPPLHFPKDFDQNASIL-HHSSLL
        +PRI RVS  FGGKDRHSKVCT++GLRDRR+RLSVPTAIQLYDLQ +LG+ QPSK +DWL+D  + EID+LPPL       +N SI  HH S L
Subjt:  NPRIFRVSPLFGGKDRHSKVCTIKGLRDRRIRLSVPTAIQLYDLQNKLGLSQPSKVIDWLIDVTRFEIDKLPPLHFPKDFDQNASIL-HHSSLL

Arabidopsis top hitse value%identityAlignment
AT3G02150.1 plastid transcription factor 11.7e-2965.96Show/hide
Query:  NPRIFRVSPLFGGKDRHSKVCTIKGLRDRRIRLSVPTAIQLYDLQNKLGLSQPSKVIDWLIDVTRFEIDKLPPLHFPKDFDQNASIL-HHSSLL
        +PRI RVS  FGGKDRHSKVCT++GLRDRR+RLSVPTAIQLYDLQ +LG+ QPSK +DWL+D  + EID+LPPL       +N SI  HH S L
Subjt:  NPRIFRVSPLFGGKDRHSKVCTIKGLRDRRIRLSVPTAIQLYDLQNKLGLSQPSKVIDWLIDVTRFEIDKLPPLHFPKDFDQNASIL-HHSSLL

AT3G02150.2 plastid transcription factor 11.7e-2965.96Show/hide
Query:  NPRIFRVSPLFGGKDRHSKVCTIKGLRDRRIRLSVPTAIQLYDLQNKLGLSQPSKVIDWLIDVTRFEIDKLPPLHFPKDFDQNASIL-HHSSLL
        +PRI RVS  FGGKDRHSKVCT++GLRDRR+RLSVPTAIQLYDLQ +LG+ QPSK +DWL+D  + EID+LPPL       +N SI  HH S L
Subjt:  NPRIFRVSPLFGGKDRHSKVCTIKGLRDRRIRLSVPTAIQLYDLQNKLGLSQPSKVIDWLIDVTRFEIDKLPPLHFPKDFDQNASIL-HHSSLL

AT5G08060.1 unknown protein1.6e-4364.57Show/hide
Query:  TMAKASSSLIQTLKRYIKKPWEITGPCADPEYRSAVPSALEYRVFCPATTKEKAIVPTSNPETVFDIKYYTRDQRRNRPPIRRTILKKPDVEKMMKETK-
        +++ A+SSL+Q L+RYIKKPW+ITGPCA PEY  AVP A EYR+ CPAT  E+AIVP+S+PETV++I Y+ RDQRRNRPPIRR +L K +V +MM E K 
Subjt:  TMAKASSSLIQTLKRYIKKPWEITGPCADPEYRSAVPSALEYRVFCPATTKEKAIVPTSNPETVFDIKYYTRDQRRNRPPIRRTILKKPDVEKMMKETK-

Query:  FDPADFPKVYLTAAIEEDINARGGGYQ
        FD +DFPKVYLT  +EED++ RGGGY+
Subjt:  FDPADFPKVYLTAAIEEDINARGGGYQ

AT5G08070.1 TCP domain protein 177.1e-3174.39Show/hide
Query:  NPRIFRVSPLFGGKDRHSKVCTIKGLRDRRIRLSVPTAIQLYDLQNKLGLSQPSKVIDWLIDVTRFEIDKLPPLHFPKDFDQ
        NPRI RVS  FGGKDRHSKVCT++GLRDRRIRLSV TAIQ+YDLQ +LGLSQPSKVIDWL++V + ++D LPPL FP  F Q
Subjt:  NPRIFRVSPLFGGKDRHSKVCTIKGLRDRRIRLSVPTAIQLYDLQNKLGLSQPSKVIDWLIDVTRFEIDKLPPLHFPKDFDQ

AT5G60970.1 TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 51.3e-3257.5Show/hide
Query:  HQKLQERVNNMISKLKEEGVHDEAKQMEGKRKKAFLRGNPRIFRVSPLFGGKDRHSKVCTIKGLRDRRIRLSVPTAIQLYDLQNKLGLSQPSKVIDWLID
        +Q  Q  +N+M+ + +   V    +     R       NPRI RVS  FGGKDRHSKVCT++GLRDRRIRLSVPTAIQLYDLQ++LGLSQPSKVIDWL++
Subjt:  HQKLQERVNNMISKLKEEGVHDEAKQMEGKRKKAFLRGNPRIFRVSPLFGGKDRHSKVCTIKGLRDRRIRLSVPTAIQLYDLQNKLGLSQPSKVIDWLID

Query:  VTRFEIDKLPPLHFPKDFDQ
          + ++DKLPPL FP  F+Q
Subjt:  VTRFEIDKLPPLHFPKDFDQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGTTATAATTTTGGGTTGCTCCGCTCAGCTTCGCTGCCGTTCACCATGGCCAAAGCTTCGTCCTCCTTAATCCAAACCCTAAAGCGCTACATCAAGAAGCCTTGGGA
GATCACCGGCCCGTGTGCAGATCCAGAGTACAGATCAGCCGTCCCGAGCGCCTTAGAGTACAGGGTCTTTTGCCCCGCCACTACAAAGGAGAAAGCCATTGTCCCTACCT
CCAATCCCGAGACGGTCTTCGACATTAAGTATTACACCCGCGACCAGCGTCGCAATCGCCCTCCAATTCGACGTACCATCCTCAAGAAACCTGACGTCGAGAAGATGATG
AAGGAGACCAAGTTCGACCCTGCTGACTTTCCCAAAGTTTATCTCACTGCCGCGATCGAGGAGGATATAAATGCTCGTGGAGGTGGTTATCAGAATAATGCTATTTCTTG
CAACGATAGTAAGCGCAAGATTTCTGACATAATTAAGTTGTCCTTTCATCAGAAACTACAAGAAAGAGTAAACAATATGATCTCAAAATTGAAGGAAGAGGGTGTTCATG
ATGAAGCAAAACAAATGGAGGGCAAAAGGAAGAAGGCATTTCTAAGAGGCAATCCAAGAATTTTTAGGGTTTCACCTTTGTTTGGAGGAAAAGATAGGCACAGCAAAGTT
TGTACAATAAAAGGCTTAAGAGACAGAAGGATTAGGCTTTCAGTTCCAACTGCAATTCAACTTTATGATTTGCAAAACAAACTTGGTCTTAGCCAACCCAGCAAAGTCAT
AGATTGGCTTATTGATGTCACAAGATTTGAAATCGATAAGCTCCCACCACTCCATTTTCCAAAAGATTTTGACCAAAATGCCTCAATTCTTCATCATTCTTCACTGCTTT
TTCCTCAGATTCCTCATTTTGATATTGCAGATGCTGCAGTGAAGGCCAAAAATGAAGAAACTGATCACAGGCTTTTGCTTCATAAGTTGTCTTCTTTATCTGCTCTTCAA
GTTCAAACCAATGCCATTAATGGAAACTGTTGCCATTTTGAACCTCCAAGCTTTCCATTCCCATTAATGGATCAGATCAATCCAGTTTCATTTTCCTTCTGTCCCTTGAC
GATGCCGTCTGAAGTCAATAGGCCAAGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTGTTATAATTTTGGGTTGCTCCGCTCAGCTTCGCTGCCGTTCACCATGGCCAAAGCTTCGTCCTCCTTAATCCAAACCCTAAAGCGCTACATCAAGAAGCCTTGGGA
GATCACCGGCCCGTGTGCAGATCCAGAGTACAGATCAGCCGTCCCGAGCGCCTTAGAGTACAGGGTCTTTTGCCCCGCCACTACAAAGGAGAAAGCCATTGTCCCTACCT
CCAATCCCGAGACGGTCTTCGACATTAAGTATTACACCCGCGACCAGCGTCGCAATCGCCCTCCAATTCGACGTACCATCCTCAAGAAACCTGACGTCGAGAAGATGATG
AAGGAGACCAAGTTCGACCCTGCTGACTTTCCCAAAGTTTATCTCACTGCCGCGATCGAGGAGGATATAAATGCTCGTGGAGGTGGTTATCAGAATAATGCTATTTCTTG
CAACGATAGTAAGCGCAAGATTTCTGACATAATTAAGTTGTCCTTTCATCAGAAACTACAAGAAAGAGTAAACAATATGATCTCAAAATTGAAGGAAGAGGGTGTTCATG
ATGAAGCAAAACAAATGGAGGGCAAAAGGAAGAAGGCATTTCTAAGAGGCAATCCAAGAATTTTTAGGGTTTCACCTTTGTTTGGAGGAAAAGATAGGCACAGCAAAGTT
TGTACAATAAAAGGCTTAAGAGACAGAAGGATTAGGCTTTCAGTTCCAACTGCAATTCAACTTTATGATTTGCAAAACAAACTTGGTCTTAGCCAACCCAGCAAAGTCAT
AGATTGGCTTATTGATGTCACAAGATTTGAAATCGATAAGCTCCCACCACTCCATTTTCCAAAAGATTTTGACCAAAATGCCTCAATTCTTCATCATTCTTCACTGCTTT
TTCCTCAGATTCCTCATTTTGATATTGCAGATGCTGCAGTGAAGGCCAAAAATGAAGAAACTGATCACAGGCTTTTGCTTCATAAGTTGTCTTCTTTATCTGCTCTTCAA
GTTCAAACCAATGCCATTAATGGAAACTGTTGCCATTTTGAACCTCCAAGCTTTCCATTCCCATTAATGGATCAGATCAATCCAGTTTCATTTTCCTTCTGTCCCTTGAC
GATGCCGTCTGAAGTCAATAGGCCAAGGTGA
Protein sequenceShow/hide protein sequence
MCYNFGLLRSASLPFTMAKASSSLIQTLKRYIKKPWEITGPCADPEYRSAVPSALEYRVFCPATTKEKAIVPTSNPETVFDIKYYTRDQRRNRPPIRRTILKKPDVEKMM
KETKFDPADFPKVYLTAAIEEDINARGGGYQNNAISCNDSKRKISDIIKLSFHQKLQERVNNMISKLKEEGVHDEAKQMEGKRKKAFLRGNPRIFRVSPLFGGKDRHSKV
CTIKGLRDRRIRLSVPTAIQLYDLQNKLGLSQPSKVIDWLIDVTRFEIDKLPPLHFPKDFDQNASILHHSSLLFPQIPHFDIADAAVKAKNEETDHRLLLHKLSSLSALQ
VQTNAINGNCCHFEPPSFPFPLMDQINPVSFSFCPLTMPSEVNRPR