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CaUC04G077860 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC04G077860
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
Descriptionprotein SAR DEFICIENT 1
Genome locationCiama_Chr04:27282009..27284431
RNA-Seq ExpressionCaUC04G077860
SyntenyCaUC04G077860
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYJ99002.1 protein SAR DEFICIENT 1 [Cucumis melo var. makuwa]5.9e-0660Show/hide
Query:  EIVVLDGKCAAEVKRCNPWDLEFTDYSSCIRSRK----SPVVSGSDRKKVPRIQEAITEPFVVKD
        E+ V+   CAA +      DLEFTD SS IRSRK    + +VSGSDR K PRI+EAITEPFVVKD
Subjt:  EIVVLDGKCAAEVKRCNPWDLEFTDYSSCIRSRK----SPVVSGSDRKKVPRIQEAITEPFVVKD

XP_004137482.1 protein SAR DEFICIENT 1 [Cucumis sativus]5.9e-0660Show/hide
Query:  EIVVLDGKCAAEVKRCNPWDLEFTDYSSCIRSRK----SPVVSGSDRKKVPRIQEAITEPFVVKD
        E+ V+   CAA +      DLEFTD SS IRSRK    + +VSGSDR K PRI+EAITEPFVVKD
Subjt:  EIVVLDGKCAAEVKRCNPWDLEFTDYSSCIRSRK----SPVVSGSDRKKVPRIQEAITEPFVVKD

XP_008459337.1 PREDICTED: protein SAR DEFICIENT 1 [Cucumis melo]5.9e-0660Show/hide
Query:  EIVVLDGKCAAEVKRCNPWDLEFTDYSSCIRSRK----SPVVSGSDRKKVPRIQEAITEPFVVKD
        E+ V+   CAA +      DLEFTD SS IRSRK    + +VSGSDR K PRI+EAITEPFVVKD
Subjt:  EIVVLDGKCAAEVKRCNPWDLEFTDYSSCIRSRK----SPVVSGSDRKKVPRIQEAITEPFVVKD

XP_022923656.1 myosin heavy chain, embryonic smooth muscle isoform-like isoform X2 [Cucurbita moschata]3.3e-0446.15Show/hide
Query:  IFFTADELLSRIQIRFLDTLSASHFFIDILWKGMEVLVPC------DSISPLLSRRSNSYSSSDLEELLKIETRCGQV
        +F    EL+ RIQIR     S         ++  +VL P       D +SP+LSRRS+SYSSSDLEEL++IETRC Q+
Subjt:  IFFTADELLSRIQIRFLDTLSASHFFIDILWKGMEVLVPC------DSISPLLSRRSNSYSSSDLEELLKIETRCGQV

XP_022923656.1 myosin heavy chain, embryonic smooth muscle isoform-like isoform X2 [Cucurbita moschata]1.5e-0175Show/hide
Query:  KEVRRELDVSTRNASTTCRRVEELIENIERSK
        KE++RELD+ST+NAST CR VEELIEN ERS+
Subjt:  KEVRRELDVSTRNASTTCRRVEELIENIERSK

XP_038896024.1 protein SAR DEFICIENT 1-like [Benincasa hispida]5.4e-0742.28Show/hide
Query:  PIFIHDEIGND-------GSCMKIEIVVLDGKCA--------------------------------AEVKRC--NPWDLEFTDYSSCIRSRK----SPVV
        P+ I  E+G +        S +KIEIVVLDG+ A                                A ++ C     DLEFTD SS IRSRK    + VV
Subjt:  PIFIHDEIGND-------GSCMKIEIVVLDGKCA--------------------------------AEVKRC--NPWDLEFTDYSSCIRSRK----SPVV

Query:  SGSDRKKVPRIQEAITEPFVVKD
        SGSDR K PRI+EAITEPFVVKD
Subjt:  SGSDRKKVPRIQEAITEPFVVKD

TrEMBL top hitse value%identityAlignment
A0A0A0LTG3 Uncharacterized protein1.2e-0450Show/hide
Query:  FFTADELLSRIQIRFLDTLSASHFFIDILWKGMEVLVP---CDSISPLLSRRSNSYSSSDLEELLKIETRCGQV
        FF A E +       L+T S    F+D  W    + +P    DSISP+ SRRSNSYSSSDLEELL+I TRC Q+
Subjt:  FFTADELLSRIQIRFLDTLSASHFFIDILWKGMEVLVP---CDSISPLLSRRSNSYSSSDLEELLKIETRCGQV

A0A0A0LTG3 Uncharacterized protein1.1e-0278.79Show/hide
Query:  NKEVRRELDVSTRNASTTCRRVEELIENIERSK
        N+E++RELDVSTRNAST CR VEELIEN ERS+
Subjt:  NKEVRRELDVSTRNASTTCRRVEELIENIERSK

A0A0A0LTG3 Uncharacterized protein1.6e-0446.15Show/hide
Query:  IFFTADELLSRIQIRFLDTLSASHFFIDILWKGMEVLVPC------DSISPLLSRRSNSYSSSDLEELLKIETRCGQV
        +F    EL+ RIQIR     S         ++  +VL P       D +SP+LSRRS+SYSSSDLEEL++IETRC Q+
Subjt:  IFFTADELLSRIQIRFLDTLSASHFFIDILWKGMEVLVPC------DSISPLLSRRSNSYSSSDLEELLKIETRCGQV

A0A1S3C9X0 protein SAR DEFICIENT 12.9e-0660Show/hide
Query:  EIVVLDGKCAAEVKRCNPWDLEFTDYSSCIRSRK----SPVVSGSDRKKVPRIQEAITEPFVVKD
        E+ V+   CAA +      DLEFTD SS IRSRK    + +VSGSDR K PRI+EAITEPFVVKD
Subjt:  EIVVLDGKCAAEVKRCNPWDLEFTDYSSCIRSRK----SPVVSGSDRKKVPRIQEAITEPFVVKD

A0A5D3BGW2 Protein SAR DEFICIENT 12.9e-0660Show/hide
Query:  EIVVLDGKCAAEVKRCNPWDLEFTDYSSCIRSRK----SPVVSGSDRKKVPRIQEAITEPFVVKD
        E+ V+   CAA +      DLEFTD SS IRSRK    + +VSGSDR K PRI+EAITEPFVVKD
Subjt:  EIVVLDGKCAAEVKRCNPWDLEFTDYSSCIRSRK----SPVVSGSDRKKVPRIQEAITEPFVVKD

A0A6J1E7C9 myosin heavy chain, embryonic smooth muscle isoform-like isoform X27.3e-0275Show/hide
Query:  KEVRRELDVSTRNASTTCRRVEELIENIERSK
        KE++RELD+ST+NAST CR VEELIEN ERS+
Subjt:  KEVRRELDVSTRNASTTCRRVEELIENIERSK

A0A6J1E7C9 myosin heavy chain, embryonic smooth muscle isoform-like isoform X22.1e-0446.34Show/hide
Query:  IFFTADELLSRIQIRFLDTLSASH----FFIDILWKGMEVLVPC------DSISPLLSRRSNSYSSSDLEELLKIETRCGQV
        +F    EL+ RIQIR     S  +     F  I     +VL P       D +SP+LSRRS+SYSSSDLEEL++IETRC Q+
Subjt:  IFFTADELLSRIQIRFLDTLSASH----FFIDILWKGMEVLVPC------DSISPLLSRRSNSYSSSDLEELLKIETRCGQV

A0A6J1E7D3 myosin heavy chain, embryonic smooth muscle isoform-like isoform X57.3e-0275Show/hide
Query:  KEVRRELDVSTRNASTTCRRVEELIENIERSK
        KE++RELD+ST+NAST CR VEELIEN ERS+
Subjt:  KEVRRELDVSTRNASTTCRRVEELIENIERSK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAACTCTTTAGAAACTTTCGAACTTGTGATAAAAGGTGACTATGGACATATTTGTAAATGCTTGATCTTTGACCACAAACGGTTCGGTTATGGCATTTTC
ACGACCCGACCCGGAAACAATTGGGGATCTTTTTTGTCAATGAAGCTCGAGTTACCGGTGAATTCAAGATCTCCGATGGATGTAGCTTTTGACTTGTCCTTCACT
ATGCTAGCATTGAATTCTTCAGCCGCCCGATCCTCTCGATCACCTGCAGCAATTCGCCGTCGAACAATTCCAATTTTCATTCACGATGAAATCGGCAACGACGGA
TCGTGTATGAAAATTGAAATCGTGGTGCTCGACGGCAAATGTGCAGCAGAGGTCAAACGCTGCAACCCTTGGGATCTTGAATTCACCGATTATTCAAGCTGCATT
CGGAGCAGGAAATCCCCAGTTGTTTCCGGGTCGGATCGTAAAAAAGTCCCCCGGATTCAGGAAGCCATAACCGAACCGTTTGTGGTCAAAGATCAAACAGTGACA
AATCTTCTCCAAAACTATAATATTTCATCATATCTCCTCCCCAATTTTCCGGAAACTAAATTTCAATTTTCAGAACAGCCATTAAAACTTGATAACCAATGCATT
TTTTTTACTGCTGATGAATTGCTTTCGAGGATTCAAATTCGCTTCCTTGATACGTTATCTGCGAGCCATTTTTTCATCGATATTCTCTGGAAAGGAATGGAGGTA
CTTGTTCCCTGTGATTCTATTTCACCATTGTTGAGTCGCAGAAGCAATAGCTATAGTTCATCTGATTTAGAGGAACTTCTCAAGATTGAGACAAGATGTGGGCAG
GTATATTTTTTCTGTCTACTTGCTGAAAGTTTCACTTTTGACATGAGTTTGGAAGTTAAAATTACTAGAAGTGGTTGCTTCAAGTGTAGGAAATATCCTTCTTGT
GAAATATGTCCAAATCAGAGAATAAGGAATAAAAATCTATTGACAAAATCGTTACAGACCAACCTTCTAGACTATTCTTCATACGTGGCTCTCTTGACTGATCTT
GTCATTCTCCCTAACAATAAGGAAGTTCGAAGGGAGCTGGATGTGTCAACAAGAAATGCCTCCACAACTTGTCGACGTGTCGAGGAATTGATTGAAAACATTGAG
AGATCAAAAAAATACTATGAGGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGGAAACTCTTTAGAAACTTTCGAACTTGTGATAAAAGGTGACTATGGACATATTTGTAAATGCTTGATCTTTGACCACAAACGGTTCGGTTATGGCATTTTC
ACGACCCGACCCGGAAACAATTGGGGATCTTTTTTGTCAATGAAGCTCGAGTTACCGGTGAATTCAAGATCTCCGATGGATGTAGCTTTTGACTTGTCCTTCACT
ATGCTAGCATTGAATTCTTCAGCCGCCCGATCCTCTCGATCACCTGCAGCAATTCGCCGTCGAACAATTCCAATTTTCATTCACGATGAAATCGGCAACGACGGA
TCGTGTATGAAAATTGAAATCGTGGTGCTCGACGGCAAATGTGCAGCAGAGGTCAAACGCTGCAACCCTTGGGATCTTGAATTCACCGATTATTCAAGCTGCATT
CGGAGCAGGAAATCCCCAGTTGTTTCCGGGTCGGATCGTAAAAAAGTCCCCCGGATTCAGGAAGCCATAACCGAACCGTTTGTGGTCAAAGATCAAACAGTGACA
AATCTTCTCCAAAACTATAATATTTCATCATATCTCCTCCCCAATTTTCCGGAAACTAAATTTCAATTTTCAGAACAGCCATTAAAACTTGATAACCAATGCATT
TTTTTTACTGCTGATGAATTGCTTTCGAGGATTCAAATTCGCTTCCTTGATACGTTATCTGCGAGCCATTTTTTCATCGATATTCTCTGGAAAGGAATGGAGGTA
CTTGTTCCCTGTGATTCTATTTCACCATTGTTGAGTCGCAGAAGCAATAGCTATAGTTCATCTGATTTAGAGGAACTTCTCAAGATTGAGACAAGATGTGGGCAG
GTATATTTTTTCTGTCTACTTGCTGAAAGTTTCACTTTTGACATGAGTTTGGAAGTTAAAATTACTAGAAGTGGTTGCTTCAAGTGTAGGAAATATCCTTCTTGT
GAAATATGTCCAAATCAGAGAATAAGGAATAAAAATCTATTGACAAAATCGTTACAGACCAACCTTCTAGACTATTCTTCATACGTGGCTCTCTTGACTGATCTT
GTCATTCTCCCTAACAATAAGGAAGTTCGAAGGGAGCTGGATGTGTCAACAAGAAATGCCTCCACAACTTGTCGACGTGTCGAGGAATTGATTGAAAACATTGAG
AGATCAAAAAAATACTATGAGGAATGA
Protein sequenceShow/hide protein sequence
MGNSLETFELVIKGDYGHICKCLIFDHKRFGYGIFTTRPGNNWGSFLSMKLELPVNSRSPMDVAFDLSFTMLALNSSAARSSRSPAAIRRRTIPIFIHDEIGNDG
SCMKIEIVVLDGKCAAEVKRCNPWDLEFTDYSSCIRSRKSPVVSGSDRKKVPRIQEAITEPFVVKDQTVTNLLQNYNISSYLLPNFPETKFQFSEQPLKLDNQCI
FFTADELLSRIQIRFLDTLSASHFFIDILWKGMEVLVPCDSISPLLSRRSNSYSSSDLEELLKIETRCGQVYFFCLLAESFTFDMSLEVKITRSGCFKCRKYPSC
EICPNQRIRNKNLLTKSLQTNLLDYSSYVALLTDLVILPNNKEVRRELDVSTRNASTTCRRVEELIENIERSKKYYEE