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CaUC04G078260 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC04G078260
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionUnknown protein
Genome locationCiama_Chr04:27637772..27638294
RNA-Seq ExpressionCaUC04G078260
SyntenyCaUC04G078260
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6584453.1 hypothetical protein SDJN03_20385, partial [Cucurbita argyrosperma subsp. sororia]7.2e-1272.41Show/hide
Query:  QPSFCGVKGKERTNGIHHSSEMVAEFNAANPTCSTLYF------SLYPLNYMKLSTPL
        QPSFCGV+ KE+TNGIHHSSEMVAEFNAANPTCSTLYF       LY L Y+ L+T L
Subjt:  QPSFCGVKGKERTNGIHHSSEMVAEFNAANPTCSTLYF------SLYPLNYMKLSTPL
KGN63987.1 hypothetical protein Csa_014108 [Cucumis sativus]1.3e-2493.1Show/hide
Query:  MPAICFDHITFQCLLDFQPSFCGVKGKERTNGIHHSSEMVAEFNAANPTCSTLYFSLY
        MPAICFDHI FQCLLDFQPSFCGVKGKE+TNGIHHSS+MVAEFNAANPTCS+LYFSLY
Subjt:  MPAICFDHITFQCLLDFQPSFCGVKGKERTNGIHHSSEMVAEFNAANPTCSTLYFSLY
TrEMBL top hitse value%identityAlignment
A0A0A0LTA5 Uncharacterized protein6.1e-2593.1Show/hide
Query:  MPAICFDHITFQCLLDFQPSFCGVKGKERTNGIHHSSEMVAEFNAANPTCSTLYFSLY
        MPAICFDHI FQCLLDFQPSFCGVKGKE+TNGIHHSS+MVAEFNAANPTCS+LYFSLY
Subjt:  MPAICFDHITFQCLLDFQPSFCGVKGKERTNGIHHSSEMVAEFNAANPTCSTLYFSLY
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTGCCATATGCTTTGATCACATAACTTTTCAGTGTTTACTAGATTTCCAACCCAGTTTCTGTGGAGTGAAAGGGAAGGAAAGGACCAATGGGATCCACCATAGCAG
TGAGATGGTTGCAGAATTTAATGCTGCCAACCCAACTTGTTCCACCTTATATTTTTCTCTGTACCCGCTTAATTACATGAAATTGTCCACTCCACTACCATTGAAATTTT
CTCACCCTCCAAATACA
mRNA sequenceShow/hide mRNA sequence
TTCCCATATGTCAAAATCGCTGCTTTTTCCTCATTAAAGTTGGATGGATGGTATTGACTGATTGAATTGGAGGAACATGAGCGAAAATGGCTAGAGATGGATTAAGTTTT
AATGTGTTGGAAAGTGGCGGAAGCAGCTGTTAGATGGATGTTTTGTTATTATCCAAACAAGTCAGCAATGGATCAATCTTGTCATGCCTGCCATATGCTTTGATCACATA
ACTTTTCAGTGTTTACTAGATTTCCAACCCAGTTTCTGTGGAGTGAAAGGGAAGGAAAGGACCAATGGGATCCACCATAGCAGTGAGATGGTTGCAGAATTTAATGCTGC
CAACCCAACTTGTTCCACCTTATATTTTTCTCTGTACCCGCTTAATTACATGAAATTGTCCACTCCACTACCATTGAAATTTTCTCACCCTCCAAATACA
Protein sequenceShow/hide protein sequence
MPAICFDHITFQCLLDFQPSFCGVKGKERTNGIHHSSEMVAEFNAANPTCSTLYFSLYPLNYMKLSTPLPLKFSHPPNT