| GenBank top hits | e value | %identity | Alignment |
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| KAG6607420.1 Organelle RRM domain-containing protein 6, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] | 9.2e-72 | 64.06 | Show/hide |
Query: GTVPNIPDCEFLKLLQRLSGETPEKTKMTAGLPFAITAAPNPLFQFQTTHHYNIRSTETHMRIQSIQSQLAYSSTPLSFFSVRKTRSISDSPLFSVACNS
GT+ N+PD EFLKL RLS E PEKTKMTAGL F +AAP P FQ Q+ + +IRST T MRIQSIQS+LAYS+TPL FFSV+KTRSISDSPL SV C S
Subjt: GTVPNIPDCEFLKLLQRLSGETPEKTKMTAGLPFAITAAPNPLFQFQTTHHYNIRSTETHMRIQSIQSQLAYSSTPLSFFSVRKTRSISDSPLFSVACNS
Query: SSPPPSPRRYTPSTRLYVSGLSFRTTEESLRNAFKSFGQLVEVNLVMDKVANRPRGFAFLRYATEEESRKAIEGMHGKEEQSQLTKPALAIDFLFYYIQN
SSP PSPRRY+PSTRLYVSGLSFRTTEESLRNAF SFGQLVEVNLVMDKVANRPRGFAFLRYATEEES+KAIEGMHG
Subjt: SSPPPSPRRYTPSTRLYVSGLSFRTTEESLRNAFKSFGQLVEVNLVMDKVANRPRGFAFLRYATEEESRKAIEGMHGKEEQSQLTKPALAIDFLFYYIQN
Query: LGWNSLTFVHDLIILKRHCLFPCLLSQVKLTSRQVIFVEVAKSRSELRQGLKENSS
K +VIFVEVAKS+ ELRQGLKENSS
Subjt: LGWNSLTFVHDLIILKRHCLFPCLLSQVKLTSRQVIFVEVAKSRSELRQGLKENSS
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| XP_022949592.1 organelle RRM domain-containing protein 6, chloroplastic [Cucurbita moschata] | 7.1e-72 | 64.06 | Show/hide |
Query: GTVPNIPDCEFLKLLQRLSGETPEKTKMTAGLPFAITAAPNPLFQFQTTHHYNIRSTETHMRIQSIQSQLAYSSTPLSFFSVRKTRSISDSPLFSVACNS
GT+ N+PD EFLKL RLS E PEKTKMTAGL F +AAP P FQ Q+ + +IRST T MRIQSIQS+LAYS+TP FFSV+KTRSISDSPLFSV C S
Subjt: GTVPNIPDCEFLKLLQRLSGETPEKTKMTAGLPFAITAAPNPLFQFQTTHHYNIRSTETHMRIQSIQSQLAYSSTPLSFFSVRKTRSISDSPLFSVACNS
Query: SSPPPSPRRYTPSTRLYVSGLSFRTTEESLRNAFKSFGQLVEVNLVMDKVANRPRGFAFLRYATEEESRKAIEGMHGKEEQSQLTKPALAIDFLFYYIQN
SSP PSPRRY+PSTRLYVSGLSFRTTEESLRNAF SFGQLVEVNLVMDKVANRPRGFAFLRYATEEES+KAIEGMHG
Subjt: SSPPPSPRRYTPSTRLYVSGLSFRTTEESLRNAFKSFGQLVEVNLVMDKVANRPRGFAFLRYATEEESRKAIEGMHGKEEQSQLTKPALAIDFLFYYIQN
Query: LGWNSLTFVHDLIILKRHCLFPCLLSQVKLTSRQVIFVEVAKSRSELRQGLKENSS
K +VIFVEVAKS+ ELRQGLKENSS
Subjt: LGWNSLTFVHDLIILKRHCLFPCLLSQVKLTSRQVIFVEVAKSRSELRQGLKENSS
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| XP_038895072.1 organelle RRM domain-containing protein 6, chloroplastic isoform X1 [Benincasa hispida] | 1.0e-70 | 68.56 | Show/hide |
Query: MTAGLPFAITAAPNPLFQFQTTHHYNIRSTETHMRIQSIQSQLAYSSTPLSFFSVRKTRSISDSPLFSVACNSSSPPPSPRRYTPSTRLYVSGLSFRTTE
MTAGLPF + AAP P FQFQ THH NIRSTETH RI SI+SQLAYSSTPL FFSVRKT SISDSPLFS+AC SSSP PSPRRYTPSTRLYVSGLSFRTTE
Subjt: MTAGLPFAITAAPNPLFQFQTTHHYNIRSTETHMRIQSIQSQLAYSSTPLSFFSVRKTRSISDSPLFSVACNSSSPPPSPRRYTPSTRLYVSGLSFRTTE
Query: ESLRNAFKSFGQLVEVNLVMDKVANRPRGFAFLRYATEEESRKAIEGMHGKEEQSQLTKPALAIDFLFYYIQNLGWNSLTFVHDLIILKRHCLFPCLLSQ
ESLRNAFKSFGQLVEVNLVMDKVANRPRGFAFLRYATEEES+KAIEGMHG
Subjt: ESLRNAFKSFGQLVEVNLVMDKVANRPRGFAFLRYATEEESRKAIEGMHGKEEQSQLTKPALAIDFLFYYIQNLGWNSLTFVHDLIILKRHCLFPCLLSQ
Query: VKLTSRQVIFVEVAKSRSELRQGLKENSS
K +VIFVEVAKSRSELRQGLKENSS
Subjt: VKLTSRQVIFVEVAKSRSELRQGLKENSS
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| XP_038895073.1 organelle RRM domain-containing protein 6, chloroplastic isoform X2 [Benincasa hispida] | 1.4e-67 | 84.15 | Show/hide |
Query: MTAGLPFAITAAPNPLFQFQTTHHYNIRSTETHMRIQSIQSQLAYSSTPLSFFSVRKTRSISDSPLFSVACNSSSPPPSPRRYTPSTRLYVSGLSFRTTE
MTAGLPF + AAP P FQFQ THH NIRSTETH RI SI+SQLAYSSTPL FFSVRKT SISDSPLFS+AC SSSP PSPRRYTPSTRLYVSGLSFRTTE
Subjt: MTAGLPFAITAAPNPLFQFQTTHHYNIRSTETHMRIQSIQSQLAYSSTPLSFFSVRKTRSISDSPLFSVACNSSSPPPSPRRYTPSTRLYVSGLSFRTTE
Query: ESLRNAFKSFGQLVEVNLVMDKVANRPRGFAFLRYATEEESRKAIEGMHGKEEQSQLTKPALAI
ESLRNAFKSFGQLVEVNLVMDKVANRPRGFAFLRYATEEES+KAIEGMHGK + P L I
Subjt: ESLRNAFKSFGQLVEVNLVMDKVANRPRGFAFLRYATEEESRKAIEGMHGKEEQSQLTKPALAI
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| XP_038895074.1 organelle RRM domain-containing protein 6, chloroplastic isoform X3 [Benincasa hispida] | 5.2e-67 | 86.62 | Show/hide |
Query: MTAGLPFAITAAPNPLFQFQTTHHYNIRSTETHMRIQSIQSQLAYSSTPLSFFSVRKTRSISDSPLFSVACNSSSPPPSPRRYTPSTRLYVSGLSFRTTE
MTAGLPF + AAP P FQFQ THH NIRSTETH RI SI+SQLAYSSTPL FFSVRKT SISDSPLFS+AC SSSP PSPRRYTPSTRLYVSGLSFRTTE
Subjt: MTAGLPFAITAAPNPLFQFQTTHHYNIRSTETHMRIQSIQSQLAYSSTPLSFFSVRKTRSISDSPLFSVACNSSSPPPSPRRYTPSTRLYVSGLSFRTTE
Query: ESLRNAFKSFGQLVEVNLVMDKVANRPRGFAFLRYATEEESRKAIEGMHGKEEQSQL
ESLRNAFKSFGQLVEVNLVMDKVANRPRGFAFLRYATEEES+KAIEGMHGK ++L
Subjt: ESLRNAFKSFGQLVEVNLVMDKVANRPRGFAFLRYATEEESRKAIEGMHGKEEQSQL
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| TrEMBL top hits | e value | %identity | Alignment |
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| A0A0A0LQB8 RRM domain-containing protein | 7.7e-64 | 64.07 | Show/hide |
Query: MTAGLPFAITAAPNPLFQFQTTHHYNIRSTETHMRIQSIQSQLAYSSTPLSFFSVRKTRSISDSPLFSVACNSSSP--PPSPRRYTPSTRLYVSGLSFRT
MTAGL F +TAAP P FQ QTTHH +I STET MRI+SIQS+LAYSSTPL FFS RKT+SISDS LFSVAC SSSP SPRRYTPSTRLY+SGLSFRT
Subjt: MTAGLPFAITAAPNPLFQFQTTHHYNIRSTETHMRIQSIQSQLAYSSTPLSFFSVRKTRSISDSPLFSVACNSSSP--PPSPRRYTPSTRLYVSGLSFRT
Query: TEESLRNAFKSFGQLVEVNLVMDKVANRPRGFAFLRYATEEESRKAIEGMHGKEEQSQLTKPALAIDFLFYYIQNLGWNSLTFVHDLIILKRHCLFPCLL
TEESLRNAFKSFGQLVEVNLVMD++ANRPRGFAFLRYA+EEES+KAIEGMHG
Subjt: TEESLRNAFKSFGQLVEVNLVMDKVANRPRGFAFLRYATEEESRKAIEGMHGKEEQSQLTKPALAIDFLFYYIQNLGWNSLTFVHDLIILKRHCLFPCLL
Query: SQVKLTSRQVIFVEVAKSRSELRQGLKENSS
K +VIFVEVAKSRSELRQGL+ENSS
Subjt: SQVKLTSRQVIFVEVAKSRSELRQGLKENSS
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| A0A1S3AYF6 glycine-rich RNA-binding protein 4, mitochondrial-like isoform X1 | 1.4e-65 | 65.07 | Show/hide |
Query: MTAGLPFAITAAPNPLFQFQTTHHYNIRSTETHMRIQSIQSQLAYSSTPLSFFSVRKTRSISDSPLFSVACNSSSPPPSPRRYTPSTRLYVSGLSFRTTE
MTAGL F +TAAP P F QTTHH NIRSTETHMR QS QS+LAYSSTPL FFS RKT+SIS+SPLFSVAC SSS PSPRRY+PSTRLYVSGLSFRTTE
Subjt: MTAGLPFAITAAPNPLFQFQTTHHYNIRSTETHMRIQSIQSQLAYSSTPLSFFSVRKTRSISDSPLFSVACNSSSPPPSPRRYTPSTRLYVSGLSFRTTE
Query: ESLRNAFKSFGQLVEVNLVMDKVANRPRGFAFLRYATEEESRKAIEGMHGKEEQSQLTKPALAIDFLFYYIQNLGWNSLTFVHDLIILKRHCLFPCLLSQ
ESLRNAFKSFGQLVEVNLVMD+VANRPRGFAFLRYA+EEES+KAIEGMHG
Subjt: ESLRNAFKSFGQLVEVNLVMDKVANRPRGFAFLRYATEEESRKAIEGMHGKEEQSQLTKPALAIDFLFYYIQNLGWNSLTFVHDLIILKRHCLFPCLLSQ
Query: VKLTSRQVIFVEVAKSRSELRQGLKENSS
K +VIFVE+AK RSELRQGLKENSS
Subjt: VKLTSRQVIFVEVAKSRSELRQGLKENSS
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| A0A1S4E0R2 glycine-rich RNA-binding protein 4, mitochondrial-like isoform X2 | 2.2e-63 | 80.49 | Show/hide |
Query: MTAGLPFAITAAPNPLFQFQTTHHYNIRSTETHMRIQSIQSQLAYSSTPLSFFSVRKTRSISDSPLFSVACNSSSPPPSPRRYTPSTRLYVSGLSFRTTE
MTAGL F +TAAP P F QTTHH NIRSTETHMR QS QS+LAYSSTPL FFS RKT+SIS+SPLFSVAC SSS PSPRRY+PSTRLYVSGLSFRTTE
Subjt: MTAGLPFAITAAPNPLFQFQTTHHYNIRSTETHMRIQSIQSQLAYSSTPLSFFSVRKTRSISDSPLFSVACNSSSPPPSPRRYTPSTRLYVSGLSFRTTE
Query: ESLRNAFKSFGQLVEVNLVMDKVANRPRGFAFLRYATEEESRKAIEGMHGKEEQSQLTKPALAI
ESLRNAFKSFGQLVEVNLVMD+VANRPRGFAFLRYA+EEES+KAIEGMHGK + P L I
Subjt: ESLRNAFKSFGQLVEVNLVMDKVANRPRGFAFLRYATEEESRKAIEGMHGKEEQSQLTKPALAI
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| A0A5A7SXY0 Glycine-rich RNA-binding protein 4 | 2.2e-63 | 83.54 | Show/hide |
Query: MTAGLPFAITAAPNPLFQFQTTHHYNIRSTETHMRIQSIQSQLAYSSTPLSFFSVRKTRSISDSPLFSVACNSSSPPPSPRRYTPSTRLYVSGLSFRTTE
MTAGL F +TAAP P FQ QTTHH NIRSTETHMR QS QS+LAYSSTPL FFS RKT+SIS+SPLFSVAC SSS PSPRRY+PSTRLYVSGLSFRTTE
Subjt: MTAGLPFAITAAPNPLFQFQTTHHYNIRSTETHMRIQSIQSQLAYSSTPLSFFSVRKTRSISDSPLFSVACNSSSPPPSPRRYTPSTRLYVSGLSFRTTE
Query: ESLRNAFKSFGQLVEVNLVMDKVANRPRGFAFLRYATEEESRKAIEGMHGKEEQSQLT
ESLRNAFKSFGQLVEVNLVMD+VANRPRGFAFLRYA+EEES+KAIEGMHGK S L+
Subjt: ESLRNAFKSFGQLVEVNLVMDKVANRPRGFAFLRYATEEESRKAIEGMHGKEEQSQLT
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| A0A6J1GCJ4 organelle RRM domain-containing protein 6, chloroplastic | 3.4e-72 | 64.06 | Show/hide |
Query: GTVPNIPDCEFLKLLQRLSGETPEKTKMTAGLPFAITAAPNPLFQFQTTHHYNIRSTETHMRIQSIQSQLAYSSTPLSFFSVRKTRSISDSPLFSVACNS
GT+ N+PD EFLKL RLS E PEKTKMTAGL F +AAP P FQ Q+ + +IRST T MRIQSIQS+LAYS+TP FFSV+KTRSISDSPLFSV C S
Subjt: GTVPNIPDCEFLKLLQRLSGETPEKTKMTAGLPFAITAAPNPLFQFQTTHHYNIRSTETHMRIQSIQSQLAYSSTPLSFFSVRKTRSISDSPLFSVACNS
Query: SSPPPSPRRYTPSTRLYVSGLSFRTTEESLRNAFKSFGQLVEVNLVMDKVANRPRGFAFLRYATEEESRKAIEGMHGKEEQSQLTKPALAIDFLFYYIQN
SSP PSPRRY+PSTRLYVSGLSFRTTEESLRNAF SFGQLVEVNLVMDKVANRPRGFAFLRYATEEES+KAIEGMHG
Subjt: SSPPPSPRRYTPSTRLYVSGLSFRTTEESLRNAFKSFGQLVEVNLVMDKVANRPRGFAFLRYATEEESRKAIEGMHGKEEQSQLTKPALAIDFLFYYIQN
Query: LGWNSLTFVHDLIILKRHCLFPCLLSQVKLTSRQVIFVEVAKSRSELRQGLKENSS
K +VIFVEVAKS+ ELRQGLKENSS
Subjt: LGWNSLTFVHDLIILKRHCLFPCLLSQVKLTSRQVIFVEVAKSRSELRQGLKENSS
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| C0HFE5 Organelle RRM domain-containing protein 1, chloroplastic | 1.7e-12 | 50 | Show/hide |
Query: RLYVSGLSFRTTEESLRNAFKSFGQLVEVNLVMDKVANRPRGFAFLRYATEEESRKAIEGMHGK
RL+V+GLSF T+E++LR AF+ FG+LVEV ++MD+++ R +G+AF+ Y TEE A++ M+G+
Subjt: RLYVSGLSFRTTEESLRNAFKSFGQLVEVNLVMDKVANRPRGFAFLRYATEEESRKAIEGMHGK
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| Q6YWP9 Organelle RRM domain-containing protein 1, chloroplastic | 5.9e-13 | 51.56 | Show/hide |
Query: RLYVSGLSFRTTEESLRNAFKSFGQLVEVNLVMDKVANRPRGFAFLRYATEEESRKAIEGMHGK
RL+V+GLSF T+E++LR AF+ FG+LVEV ++MDK++ R +G+AF+ Y TEE A++ M+G+
Subjt: RLYVSGLSFRTTEESLRNAFKSFGQLVEVNLVMDKVANRPRGFAFLRYATEEESRKAIEGMHGK
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| Q8L440 Organelle RRM domain-containing protein 1, chloroplastic | 2.7e-13 | 46.25 | Show/hide |
Query: NSSSPPPSPRRYTPSTRLYVSGLSFRTTEESLRNAFKSFGQLVEVNLVMDKVANRPRGFAFLRYATEEESRKAIEGMHGK
+S SPP + +L+++GLSF T+E++LR AF+ FG+LVEV ++MDK++ R +G+AFL Y TEE + A++ M+GK
Subjt: NSSSPPPSPRRYTPSTRLYVSGLSFRTTEESLRNAFKSFGQLVEVNLVMDKVANRPRGFAFLRYATEEESRKAIEGMHGK
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| Q9FIU6 Organelle RRM domain-containing protein 2, mitochondrial | 2.7e-13 | 49.37 | Show/hide |
Query: SSSPPPSPRRYTPSTRLYVSGLSFRTTEESLRNAFKSFGQLVEVNLVMDKVANRPRGFAFLRYATEEESRKAIEGMHGK
+ S P+ + PST L+VSGLS RTT E LR AF FG++ + +V D+V+ +GF F+RYAT E+S K I GM GK
Subjt: SSSPPPSPRRYTPSTRLYVSGLSFRTTEESLRNAFKSFGQLVEVNLVMDKVANRPRGFAFLRYATEEESRKAIEGMHGK
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| Q9FX45 Organelle RRM domain-containing protein 6, chloroplastic | 4.4e-24 | 58.16 | Show/hide |
Query: SVRKTRSISDSPLFSVACNSSSPPPSPRRYTPSTRLYVSGLSFRTTEESLRNAFKSFGQLVEVNLVMDKVANRPRGFAFLRYATEEESRKAIEGMHGK
S R+ R I + S SS P P T+LYVSGLSFRTTE++LR+ F+ FG L+ +N+VMDKVANRP+GFAFLRY TEEE+ KAI+GMHGK
Subjt: SVRKTRSISDSPLFSVACNSSSPPPSPRRYTPSTRLYVSGLSFRTTEESLRNAFKSFGQLVEVNLVMDKVANRPRGFAFLRYATEEESRKAIEGMHGK
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT1G73530.1 RNA-binding (RRM/RBD/RNP motifs) family protein | 3.1e-25 | 58.16 | Show/hide |
Query: SVRKTRSISDSPLFSVACNSSSPPPSPRRYTPSTRLYVSGLSFRTTEESLRNAFKSFGQLVEVNLVMDKVANRPRGFAFLRYATEEESRKAIEGMHGK
S R+ R I + S SS P P T+LYVSGLSFRTTE++LR+ F+ FG L+ +N+VMDKVANRP+GFAFLRY TEEE+ KAI+GMHGK
Subjt: SVRKTRSISDSPLFSVACNSSSPPPSPRRYTPSTRLYVSGLSFRTTEESLRNAFKSFGQLVEVNLVMDKVANRPRGFAFLRYATEEESRKAIEGMHGK
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| AT2G27330.1 RNA-binding (RRM/RBD/RNP motifs) family protein | 1.5e-11 | 41.67 | Show/hide |
Query: RRYTP-------STRLYVSGLSFRTTEESLRNAFKSFGQLVEVNLVMDKVANRPRGFAFLRYATEEESRKAI
R +TP S+ L+V G+SF +TEE+L AF +GQ+++V+++MDK+ RP+GFA++ ++++EE+ KA+
Subjt: RRYTP-------STRLYVSGLSFRTTEESLRNAFKSFGQLVEVNLVMDKVANRPRGFAFLRYATEEESRKAI
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| AT3G20930.1 RNA-binding (RRM/RBD/RNP motifs) family protein | 1.9e-14 | 46.25 | Show/hide |
Query: NSSSPPPSPRRYTPSTRLYVSGLSFRTTEESLRNAFKSFGQLVEVNLVMDKVANRPRGFAFLRYATEEESRKAIEGMHGK
+S SPP + +L+++GLSF T+E++LR AF+ FG+LVEV ++MDK++ R +G+AFL Y TEE + A++ M+GK
Subjt: NSSSPPPSPRRYTPSTRLYVSGLSFRTTEESLRNAFKSFGQLVEVNLVMDKVANRPRGFAFLRYATEEESRKAIEGMHGK
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| AT5G06210.1 RNA binding (RRM/RBD/RNP motifs) family protein | 4.4e-11 | 39.51 | Show/hide |
Query: NSSSPPPSPRRYTPSTRLYVSGLSFRTTEESLRNAFKSFGQLVEVNLVMDKVANRPRGFAFLRYATEEESRKAIEGMHGKE
NSS+ +R +++L++ GLSF TTE+ L AF GQ+VE +VMD+V++R +GF F+ +A+ +E++KA+ +G++
Subjt: NSSSPPPSPRRYTPSTRLYVSGLSFRTTEESLRNAFKSFGQLVEVNLVMDKVANRPRGFAFLRYATEEESRKAIEGMHGKE
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| AT5G54580.1 RNA-binding (RRM/RBD/RNP motifs) family protein | 1.9e-14 | 49.37 | Show/hide |
Query: SSSPPPSPRRYTPSTRLYVSGLSFRTTEESLRNAFKSFGQLVEVNLVMDKVANRPRGFAFLRYATEEESRKAIEGMHGK
+ S P+ + PST L+VSGLS RTT E LR AF FG++ + +V D+V+ +GF F+RYAT E+S K I GM GK
Subjt: SSSPPPSPRRYTPSTRLYVSGLSFRTTEESLRNAFKSFGQLVEVNLVMDKVANRPRGFAFLRYATEEESRKAIEGMHGK
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