; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CaUC04G078640 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC04G078640
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionMYB transcription factor
Genome locationCiama_Chr04:27919601..27920407
RNA-Seq ExpressionCaUC04G078640
SyntenyCaUC04G078640
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000978 - RNA polymerase II proximal promoter sequence-specific DNA binding (molecular function)
GO:0000981 - DNA-binding transcription factor activity, RNA polymerase II-specific (molecular function)
InterPro domainsIPR001005 - SANT/Myb domain
IPR009057 - Homeobox-like domain superfamily
IPR017930 - Myb domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008455801.1 PREDICTED: transcriptional activator Myb-like [Cucumis melo]3.9e-9076.47Show/hide
Query:  MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFTEEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVI
        MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINR+PFTEEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVI
Subjt:  MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFTEEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVI

Query:  MARRSRSNRSKTLTQTQTQTPSSLHHNNHNHRLLLSSFLQLHPYPTPTPISFIPKPPDN------ATHNS---IHYYDFLHVN-TESINGSEVIDNSRKE
        MARRSR N+SKT T TQT T +  +++N+NHRLLLSSFLQLH YPT T ISF+PKPP +      A H+S   IHYYDFL VN T+S NGSEVIDNS ++
Subjt:  MARRSRSNRSKTLTQTQTQTPSSLHHNNHNHRLLLSSFLQLHPYPTPTPISFIPKPPDN------ATHNS---IHYYDFLHVN-TESINGSEVIDNSRKE

Query:  EDYDEVNNQEAATVDDVGPVLPFIDFFSASQTSNNSIS
        EDY+EVNN   +  +    +LPFIDFFSAS  ++ SIS
Subjt:  EDYDEVNNQEAATVDDVGPVLPFIDFFSASQTSNNSIS

XP_011649446.1 transcription factor MYB52 [Cucumis sativus]8.6e-9077.73Show/hide
Query:  MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFTEEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVI
        MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFTEEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVI
Subjt:  MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFTEEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVI

Query:  MARRSRSNRSKTLTQTQTQTPSSLHHNNHNHRLLLSSFLQLHPYPTPTPISFIPKPPDN------ATHNS---IHYYDFLHVN-TESINGSEVIDNSRKE
        MARRSR N+SKT T TQT T +  ++NN+N+RLLLSSFLQLH YPT + ISFIPKPP +      A H+S   IHYYDFL VN T+S+NGSEVIDNS ++
Subjt:  MARRSRSNRSKTLTQTQTQTPSSLHHNNHNHRLLLSSFLQLHPYPTPTPISFIPKPPDN------ATHNS---IHYYDFLHVN-TESINGSEVIDNSRKE

Query:  EDYDEVNNQEAATVDDVGPVLPFIDFFSASQTSNNSIS
        EDY+EVNN        V  +LPFIDFFSAS ++N SIS
Subjt:  EDYDEVNNQEAATVDDVGPVLPFIDFFSASQTSNNSIS

XP_023001003.1 transcription factor MYB52-like [Cucurbita maxima]3.9e-8269.6Show/hide
Query:  MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFTEEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVI
        MCSRGHWRPAED+KLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINR+PFTEEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVI
Subjt:  MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFTEEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVI

Query:  MARRSRSN---------RSKTLTQTQTQTPSSLHHNNHNHRLLLSSFLQLHPYPT-----------PTPI-SFIPKPPDNATHNSIHYYDFLHVNTESIN
        MAR+SR +         ++K +T+TQT +PSS  H      LLLSSFLQ    P            P PI SFIPKP D     S+ +YDFLH+N ESIN
Subjt:  MARRSRSN---------RSKTLTQTQTQTPSSLHHNNHNHRLLLSSFLQLHPYPT-----------PTPI-SFIPKPPDNATHNSIHYYDFLHVNTESIN

Query:  GSEVIDNSRKEEDYDEVNNQEAATVDDVGPVLPFIDFFSASQTSNNSISS
         SEVIDNSRK EDY+EVN +  AT     P+ PFIDFFSA QTSN+  SS
Subjt:  GSEVIDNSRKEEDYDEVNNQEAATVDDVGPVLPFIDFFSASQTSNNSISS

XP_023520216.1 transcription factor MYB52-like [Cucurbita pepo subsp. pepo]1.2e-8069.8Show/hide
Query:  MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFTEEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVI
        MCSRGHWRPAED+KLRELVERYGPHNWNAIAQKL GRSGKSCRLRWFNQLDPRINR+PFTEEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVI
Subjt:  MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFTEEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVI

Query:  MARRSRSN---RSKTLTQTQTQTPSSLHHNNHNHRLLLSSFLQLHPYPT------------PTPI-SFIPKPPDNATHNSIHYYDFLHVNTESINGSEVI
        MAR+SR +   ++K   +T+T TPSS +H      LL SSFLQ    P             P PI SFIPKP D     S+ +YDFLH+N ESIN SEVI
Subjt:  MARRSRSN---RSKTLTQTQTQTPSSLHHNNHNHRLLLSSFLQLHPYPT------------PTPI-SFIPKPPDNATHNSIHYYDFLHVNTESINGSEVI

Query:  DNSRKEEDYDEVNNQEAATVDDVGPVLPFIDFFSASQTSNNSISS
        DNSRK EDY+EVN +  AT     P+ PFIDFFSA QTSN+  SS
Subjt:  DNSRKEEDYDEVNNQEAATVDDVGPVLPFIDFFSASQTSNNSISS

XP_038895550.1 transcription factor MYB54-like [Benincasa hispida]1.4e-9279.42Show/hide
Query:  MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFTEEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVI
        MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFTEEEEERLMASHR+HGNRWAIIARLFPGRTDNAVKNHWHVI
Subjt:  MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFTEEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVI

Query:  MARRSRSNRSKTLTQTQTQTPS-SLHHNNHNH--------RLLLSSFLQLHPYPTPTPISFIPKPPD---NATHNSIHYYDFLHVNTESINGSEVIDNSR
        MARRSR N+SK    TQTQTPS SLHH+N+NH        RLLLSSFLQLH  PT   + FIPKPP      T+ S+HYYDFL+VNTESINGSEVIDNSR
Subjt:  MARRSRSNRSKTLTQTQTQTPS-SLHHNNHNH--------RLLLSSFLQLHPYPTPTPISFIPKPPD---NATHNSIHYYDFLHVNTESINGSEVIDNSR

Query:  KEEDYDEVNNQEAATVDDVGPVLPFIDFFSASQTS--NNSISS
        K EDY+EVNN E  +      VLPFIDFFSASQTS  N+SISS
Subjt:  KEEDYDEVNNQEAATVDDVGPVLPFIDFFSASQTS--NNSISS

TrEMBL top hitse value%identityAlignment
A0A0A0LPV0 Uncharacterized protein4.2e-9077.73Show/hide
Query:  MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFTEEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVI
        MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFTEEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVI
Subjt:  MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFTEEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVI

Query:  MARRSRSNRSKTLTQTQTQTPSSLHHNNHNHRLLLSSFLQLHPYPTPTPISFIPKPPDN------ATHNS---IHYYDFLHVN-TESINGSEVIDNSRKE
        MARRSR N+SKT T TQT T +  ++NN+N+RLLLSSFLQLH YPT + ISFIPKPP +      A H+S   IHYYDFL VN T+S+NGSEVIDNS ++
Subjt:  MARRSRSNRSKTLTQTQTQTPSSLHHNNHNHRLLLSSFLQLHPYPTPTPISFIPKPPDN------ATHNS---IHYYDFLHVN-TESINGSEVIDNSRKE

Query:  EDYDEVNNQEAATVDDVGPVLPFIDFFSASQTSNNSIS
        EDY+EVNN        V  +LPFIDFFSAS ++N SIS
Subjt:  EDYDEVNNQEAATVDDVGPVLPFIDFFSASQTSNNSIS

A0A1S3C1Q2 transcriptional activator Myb-like1.9e-9076.47Show/hide
Query:  MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFTEEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVI
        MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINR+PFTEEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVI
Subjt:  MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFTEEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVI

Query:  MARRSRSNRSKTLTQTQTQTPSSLHHNNHNHRLLLSSFLQLHPYPTPTPISFIPKPPDN------ATHNS---IHYYDFLHVN-TESINGSEVIDNSRKE
        MARRSR N+SKT T TQT T +  +++N+NHRLLLSSFLQLH YPT T ISF+PKPP +      A H+S   IHYYDFL VN T+S NGSEVIDNS ++
Subjt:  MARRSRSNRSKTLTQTQTQTPSSLHHNNHNHRLLLSSFLQLHPYPTPTPISFIPKPPDN------ATHNS---IHYYDFLHVN-TESINGSEVIDNSRKE

Query:  EDYDEVNNQEAATVDDVGPVLPFIDFFSASQTSNNSIS
        EDY+EVNN   +  +    +LPFIDFFSAS  ++ SIS
Subjt:  EDYDEVNNQEAATVDDVGPVLPFIDFFSASQTSNNSIS

A0A6J1CAM4 transcription factor MYB52-like2.5e-6663.44Show/hide
Query:  MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFTEEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVI
        MCSRGHWRPAEDEKLRELVER+G HNWNAIAQK++GRSGKSCRLRWFNQLDPRINRTPFT++EE RL+ASHR+HGNRWAIIAR FPGRTDNA+KNHWHVI
Subjt:  MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFTEEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVI

Query:  MARRSRSNRSKTLTQTQTQTPSSLHHNNHNHRLLLSSFLQLHPYPTPTPISFIPKP-PDNAT-HNSIHYYDFLHVNTESING--SEVIDNSRKEEDYDEV
        MAR  R ++S                  ++HRL   +F  ++ Y +P P S IP P PD +  H  + +YDFLH+N + I    SEVIDNSRK++  +EV
Subjt:  MARRSRSNRSKTLTQTQTQTPSSLHHNNHNHRLLLSSFLQLHPYPTPTPISFIPKP-PDNAT-HNSIHYYDFLHVNTESING--SEVIDNSRKEEDYDEV

Query:  NNQEAATVDDVGPVLPFIDFFSASQTS
        N Q  A  DD  P LPFIDFFSA QTS
Subjt:  NNQEAATVDDVGPVLPFIDFFSASQTS

A0A6J1EDT2 transcription factor MYB52-like7.9e-8169.23Show/hide
Query:  MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFTEEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVI
        MCSRGHWRPAED+KLRELVERYGPHNWNAIAQKL GRSGKSCRLRWFNQLDPRINR+PFTEEEEERLM SHRVHGNRWAIIARLFPGRTDNAVKNHWHVI
Subjt:  MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFTEEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVI

Query:  MARRSRSN-----RSKTLTQTQTQTPSSLHHNNHNHRLLLSSFLQLHPYPT------------PTPI-SFIPKPPDNATHNSIHYYDFLHVNTESINGSE
        MAR+SR +     ++K  T+T+T TPSS +H      LL SSFLQ    P             P PI SFIPKP D     S+ +YDFLH+N ESIN SE
Subjt:  MARRSRSN-----RSKTLTQTQTQTPSSLHHNNHNHRLLLSSFLQLHPYPT------------PTPI-SFIPKPPDNATHNSIHYYDFLHVNTESINGSE

Query:  VIDNSRKEEDYDEVNNQEAATVDDVGPVLPFIDFFSASQTSNNSISS
        VIDNSRK EDY+EVN +  AT     P+ PFIDFFSA QTSN+  SS
Subjt:  VIDNSRKEEDYDEVNNQEAATVDDVGPVLPFIDFFSASQTSNNSISS

A0A6J1KP91 transcription factor MYB52-like1.9e-8269.6Show/hide
Query:  MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFTEEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVI
        MCSRGHWRPAED+KLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINR+PFTEEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVI
Subjt:  MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFTEEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVI

Query:  MARRSRSN---------RSKTLTQTQTQTPSSLHHNNHNHRLLLSSFLQLHPYPT-----------PTPI-SFIPKPPDNATHNSIHYYDFLHVNTESIN
        MAR+SR +         ++K +T+TQT +PSS  H      LLLSSFLQ    P            P PI SFIPKP D     S+ +YDFLH+N ESIN
Subjt:  MARRSRSN---------RSKTLTQTQTQTPSSLHHNNHNHRLLLSSFLQLHPYPT-----------PTPI-SFIPKPPDNATHNSIHYYDFLHVNTESIN

Query:  GSEVIDNSRKEEDYDEVNNQEAATVDDVGPVLPFIDFFSASQTSNNSISS
         SEVIDNSRK EDY+EVN +  AT     P+ PFIDFFSA QTSN+  SS
Subjt:  GSEVIDNSRKEEDYDEVNNQEAATVDDVGPVLPFIDFFSASQTSNNSISS

SwissProt top hitse value%identityAlignment
Q5NBM8 Transcription factor CSA9.0e-5061.04Show/hide
Query:  MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFTEEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVI
        +C+RGHWRPAED KL++LV +YGP NWN IA+KL GRSGKSCRLRWFNQLDPRINR  FTEEEEERLMA+HR +GN+WA+IARLFPGRTDNAVKNHWHV+
Subjt:  MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFTEEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVI

Query:  MARRSRS-----NRSKTLTQTQTQTPS-----------SLHHNNHNHRLLLSSF
        MARR R       R K  + + +  P+           +LHH++H +    S +
Subjt:  MARRSRS-----NRSKTLTQTQTQTPS-----------SLHHNNHNHRLLLSSF

Q6R0C4 Transcription factor MYB529.6e-6050.97Show/hide
Query:  MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFTEEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVI
        MCSRGHWRPAEDEKLRELVE++GPHNWNAIAQKL GRSGKSCRLRWFNQLDPRINR PFTEEEEERL+ASHR+HGNRW++IAR FPGRTDNAVKNHWHVI
Subjt:  MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFTEEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVI

Query:  MARRSR----------------------------SNRSKTLTQTQTQTPSSLHHNNHNHRL--LLSSFLQLHPYPTPTPISFIPKPPDNATHNSIHYYDF
        MARR R                                +  T T    P    H NH   L   L+  +      TP     I +   + T   + +Y+F
Subjt:  MARRSR----------------------------SNRSKTLTQTQTQTPSSLHHNNHNHRL--LLSSFLQLHPYPTPTPISFIPKPPDNATHNSIHYYDF

Query:  LHVNTESINGSEVIDNSRKEEDYDEVNNQEAATVDDVGPVLPFIDFFSASQTSNNSI
        L VNT+S    E+IDNSRK+E+ D   N      + V    PF DF S   +++  +
Subjt:  LHVNTESINGSEVIDNSRKEEDYDEVNNQEAATVDDVGPVLPFIDFFSASQTSNNSI

Q9FX36 Transcription factor MYB543.1e-5849.8Show/hide
Query:  MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFTEEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVI
        MCSRGHWRPAEDEKL++LVE+YGPHNWNAIA KL GRSGKSCRLRWFNQLDPRINR PFTEEEEERL+A+HR+HGNRW+IIARLFPGRTDNAVKNHWHVI
Subjt:  MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFTEEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVI

Query:  MARRSRSNRSKTLTQTQTQTPSSLHHNNHNHRLLLSSFLQLHPYPTPT-----PISFIPKPPDNATHNSIH------------------------YYDFL
        MARR+R      L  + T + S +     + ++++SS    H Y +       P  FI  P   +  N +H                        +Y+FL
Subjt:  MARRSRSNRSKTLTQTQTQTPSSLHHNNHNHRLLLSSFLQLHPYPTPT-----PISFIPKPPDNATHNSIH------------------------YYDFL

Query:  HVNTESINGSEVIDNSRKEEDYDEVNNQEAATVDDVGPVLPFIDFFSASQTSN
         VNT+S N SE+ID    +    + + +  + V       PF DF S   +++
Subjt:  HVNTESINGSEVIDNSRKEEDYDEVNNQEAATVDDVGPVLPFIDFFSASQTSN

Q9LQX5 Transcription factor MYB1171.0e-4858.48Show/hide
Query:  RGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFTEEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMAR
        RGHWRPAED KL+ELV  YGP NWN IA+KLQGRSGKSCRLRWFNQLDPRINR  FTEEEEERLM +HR++GN+WA+IARLFPGRTDN+VKNHWHV+MAR
Subjt:  RGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFTEEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMAR

Query:  RSRSNRSKTLTQTQTQTPSSLHHNNHNHRLLLSSFLQLHPYPTPTPISFI--------PKPPDNATHNSIH
        + R + S    +          H  +NH          HP P P   SFI        P P  N TH+ ++
Subjt:  RSRSNRSKTLTQTQTQTPSSLHHNNHNHRLLLSSFLQLHPYPTPTPISFI--------PKPPDNATHNSIH

Q9SEZ4 Transcription factor MYB1055.0e-4880.56Show/hide
Query:  SRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFTEEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMA
        SRGHWRPAED KL+ELV  YGP NWN IA+KLQGRSGKSCRLRWFNQLDPRINR  FTEEEEERLM +HR++GN+WA+IARLFPGRTDN+VKNHWHVIMA
Subjt:  SRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFTEEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMA

Query:  RRSRSNRS
        R+ R   S
Subjt:  RRSRSNRS

Arabidopsis top hitse value%identityAlignment
AT1G17950.1 myb domain protein 526.8e-6150.97Show/hide
Query:  MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFTEEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVI
        MCSRGHWRPAEDEKLRELVE++GPHNWNAIAQKL GRSGKSCRLRWFNQLDPRINR PFTEEEEERL+ASHR+HGNRW++IAR FPGRTDNAVKNHWHVI
Subjt:  MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFTEEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVI

Query:  MARRSR----------------------------SNRSKTLTQTQTQTPSSLHHNNHNHRL--LLSSFLQLHPYPTPTPISFIPKPPDNATHNSIHYYDF
        MARR R                                +  T T    P    H NH   L   L+  +      TP     I +   + T   + +Y+F
Subjt:  MARRSR----------------------------SNRSKTLTQTQTQTPSSLHHNNHNHRL--LLSSFLQLHPYPTPTPISFIPKPPDNATHNSIHYYDF

Query:  LHVNTESINGSEVIDNSRKEEDYDEVNNQEAATVDDVGPVLPFIDFFSASQTSNNSI
        L VNT+S    E+IDNSRK+E+ D   N      + V    PF DF S   +++  +
Subjt:  LHVNTESINGSEVIDNSRKEEDYDEVNNQEAATVDDVGPVLPFIDFFSASQTSNNSI

AT1G26780.1 myb domain protein 1177.1e-5058.48Show/hide
Query:  RGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFTEEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMAR
        RGHWRPAED KL+ELV  YGP NWN IA+KLQGRSGKSCRLRWFNQLDPRINR  FTEEEEERLM +HR++GN+WA+IARLFPGRTDN+VKNHWHV+MAR
Subjt:  RGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFTEEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMAR

Query:  RSRSNRSKTLTQTQTQTPSSLHHNNHNHRLLLSSFLQLHPYPTPTPISFI--------PKPPDNATHNSIH
        + R + S    +          H  +NH          HP P P   SFI        P P  N TH+ ++
Subjt:  RSRSNRSKTLTQTQTQTPSSLHHNNHNHRLLLSSFLQLHPYPTPTPISFI--------PKPPDNATHNSIH

AT1G26780.2 myb domain protein 1177.1e-5058.48Show/hide
Query:  RGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFTEEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMAR
        RGHWRPAED KL+ELV  YGP NWN IA+KLQGRSGKSCRLRWFNQLDPRINR  FTEEEEERLM +HR++GN+WA+IARLFPGRTDN+VKNHWHV+MAR
Subjt:  RGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFTEEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMAR

Query:  RSRSNRSKTLTQTQTQTPSSLHHNNHNHRLLLSSFLQLHPYPTPTPISFI--------PKPPDNATHNSIH
        + R + S    +          H  +NH          HP P P   SFI        P P  N TH+ ++
Subjt:  RSRSNRSKTLTQTQTQTPSSLHHNNHNHRLLLSSFLQLHPYPTPTPISFI--------PKPPDNATHNSIH

AT1G73410.1 myb domain protein 542.2e-5949.8Show/hide
Query:  MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFTEEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVI
        MCSRGHWRPAEDEKL++LVE+YGPHNWNAIA KL GRSGKSCRLRWFNQLDPRINR PFTEEEEERL+A+HR+HGNRW+IIARLFPGRTDNAVKNHWHVI
Subjt:  MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFTEEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVI

Query:  MARRSRSNRSKTLTQTQTQTPSSLHHNNHNHRLLLSSFLQLHPYPTPT-----PISFIPKPPDNATHNSIH------------------------YYDFL
        MARR+R      L  + T + S +     + ++++SS    H Y +       P  FI  P   +  N +H                        +Y+FL
Subjt:  MARRSRSNRSKTLTQTQTQTPSSLHHNNHNHRLLLSSFLQLHPYPTPT-----PISFIPKPPDNATHNSIH------------------------YYDFL

Query:  HVNTESINGSEVIDNSRKEEDYDEVNNQEAATVDDVGPVLPFIDFFSASQTSN
         VNT+S N SE+ID    +    + + +  + V       PF DF S   +++
Subjt:  HVNTESINGSEVIDNSRKEEDYDEVNNQEAATVDDVGPVLPFIDFFSASQTSN

AT4G33450.1 myb domain protein 694.2e-5048.55Show/hide
Query:  CSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFTEEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVIM
        C RGHWRP ED+ LR+LVE+YGP NWN IAQ L GRSGKSCRLRW+NQLDP I + PFTEEEEERL+ +HR+ GNRWA IARLFPGRTDNAVKNH+HVIM
Subjt:  CSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFTEEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVIM

Query:  ARRSRSNRSKTLTQTQTQT-------PSSLHHNNHNH----RLLLSSFLQLHPYPTPTPISFIPKPPDNATHNSIHYYDFLH-VNTESINGSEVIDNSR-
        ARR R N S T T T  QT        SSL   N +H    R        L PY      SF+  PP N    S    +  H +  E     E++D    
Subjt:  ARRSRSNRSKTLTQTQTQT-------PSSLHHNNHNH----RLLLSSFLQLHPYPTPTPISFIPKPPDNATHNSIHYYDFLH-VNTESINGSEVIDNSR-

Query:  ----KEEDYDEVNNQEAATVDDVGPV--LPFIDFFSASQTS
               D+   +N++  ++ D G    + FIDF      S
Subjt:  ----KEEDYDEVNNQEAATVDDVGPV--LPFIDFFSASQTS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGCAGCAGAGGGCACTGGCGGCCTGCGGAAGACGAGAAGCTTCGAGAGCTGGTGGAGCGTTACGGACCTCATAATTGGAACGCCATAGCTCAAAAGCTTCAA
GGAAGATCCGGGAAGAGCTGCCGGTTGAGATGGTTCAATCAGTTGGATCCACGAATCAACCGAACCCCTTTCACGGAGGAGGAAGAAGAGAGGCTGATGGCCTCA
CACAGGGTTCACGGGAATAGATGGGCCATCATCGCAAGGCTTTTCCCTGGCCGCACCGATAACGCCGTCAAGAACCACTGGCACGTCATCATGGCTCGTAGGTCT
AGATCAAATAGATCCAAAACCCTAACCCAAACCCAAACCCAAACCCCATCCTCTCTTCATCACAATAATCATAATCATCGCCTTCTTCTTTCTTCCTTTCTCCAA
CTCCATCCATATCCCACTCCTACTCCTATCTCATTCATCCCCAAACCACCTGATAATGCAACGCATAATTCCATTCATTATTACGACTTTCTCCATGTAAATACG
GAGTCCATCAATGGGAGTGAAGTGATAGACAACTCAAGAAAAGAAGAGGATTATGACGAGGTCAATAATCAAGAAGCCGCCACCGTCGACGACGTCGGGCCGGTA
CTTCCCTTCATTGATTTCTTTTCTGCCTCCCAGACCTCCAACAACTCCATCTCATCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGTGCAGCAGAGGGCACTGGCGGCCTGCGGAAGACGAGAAGCTTCGAGAGCTGGTGGAGCGTTACGGACCTCATAATTGGAACGCCATAGCTCAAAAGCTTCAA
GGAAGATCCGGGAAGAGCTGCCGGTTGAGATGGTTCAATCAGTTGGATCCACGAATCAACCGAACCCCTTTCACGGAGGAGGAAGAAGAGAGGCTGATGGCCTCA
CACAGGGTTCACGGGAATAGATGGGCCATCATCGCAAGGCTTTTCCCTGGCCGCACCGATAACGCCGTCAAGAACCACTGGCACGTCATCATGGCTCGTAGGTCT
AGATCAAATAGATCCAAAACCCTAACCCAAACCCAAACCCAAACCCCATCCTCTCTTCATCACAATAATCATAATCATCGCCTTCTTCTTTCTTCCTTTCTCCAA
CTCCATCCATATCCCACTCCTACTCCTATCTCATTCATCCCCAAACCACCTGATAATGCAACGCATAATTCCATTCATTATTACGACTTTCTCCATGTAAATACG
GAGTCCATCAATGGGAGTGAAGTGATAGACAACTCAAGAAAAGAAGAGGATTATGACGAGGTCAATAATCAAGAAGCCGCCACCGTCGACGACGTCGGGCCGGTA
CTTCCCTTCATTGATTTCTTTTCTGCCTCCCAGACCTCCAACAACTCCATCTCATCCTAA
Protein sequenceShow/hide protein sequence
MCSRGHWRPAEDEKLRELVERYGPHNWNAIAQKLQGRSGKSCRLRWFNQLDPRINRTPFTEEEEERLMASHRVHGNRWAIIARLFPGRTDNAVKNHWHVIMARRS
RSNRSKTLTQTQTQTPSSLHHNNHNHRLLLSSFLQLHPYPTPTPISFIPKPPDNATHNSIHYYDFLHVNTESINGSEVIDNSRKEEDYDEVNNQEAATVDDVGPV
LPFIDFFSASQTSNNSISS