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CaUC05G079230 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC05G079230
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
Descriptionmetalloendoproteinase 4-MMP
Genome locationCiama_Chr05:446231..449701
RNA-Seq ExpressionCaUC05G079230
SyntenyCaUC05G079230
Gene Ontology termsGO:0110165 - cellular anatomical structure (cellular component)
GO:0008233 - peptidase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8650215.1 hypothetical protein Csa_010775 [Cucumis sativus]6.7e-1858.06Show/hide
Query:  PKKPRWTRGMPMVLTYAFFKDNLISNLSLKDVRAVFRNASLKWAHVIPVSFRRPTTMGTPILKSGLQRRSQR-GAGVQWRVGCFGAFFFPEIG
        P KPRWTR MPMVLTYAFFKDN +SNLSL+DVRAVFR A  KWAHVIPVSF      G   +K G  R     G      +G     F PEIG
Subjt:  PKKPRWTRGMPMVLTYAFFKDNLISNLSLKDVRAVFRNASLKWAHVIPVSFRRPTTMGTPILKSGLQRRSQR-GAGVQWRVGCFGAFFFPEIG

XP_008437790.1 PREDICTED: metalloendoproteinase 4-MMP [Cucumis melo]2.6e-1756.99Show/hide
Query:  PKKPRWTRGMPMVLTYAFFKDNLISNLSLKDVRAVFRNASLKWAHVIPVSFRRPTTMGTPILKSGLQRRSQR-GAGVQWRVGCFGAFFFPEIG
        P KPRW R MPMVLTYAFFK+N +SNLSLKDVRAVFR A  KWAHVIPVSF      G   +K G  R     G      +G     F PEIG
Subjt:  PKKPRWTRGMPMVLTYAFFKDNLISNLSLKDVRAVFRNASLKWAHVIPVSFRRPTTMGTPILKSGLQRRSQR-GAGVQWRVGCFGAFFFPEIG

XP_011650638.1 metalloendoproteinase 4-MMP [Cucumis sativus]6.7e-1858.06Show/hide
Query:  PKKPRWTRGMPMVLTYAFFKDNLISNLSLKDVRAVFRNASLKWAHVIPVSFRRPTTMGTPILKSGLQRRSQR-GAGVQWRVGCFGAFFFPEIG
        P KPRWTR MPMVLTYAFFKDN +SNLSL+DVRAVFR A  KWAHVIPVSF      G   +K G  R     G      +G     F PEIG
Subjt:  PKKPRWTRGMPMVLTYAFFKDNLISNLSLKDVRAVFRNASLKWAHVIPVSFRRPTTMGTPILKSGLQRRSQR-GAGVQWRVGCFGAFFFPEIG

XP_022944853.1 metalloendoproteinase 4-MMP-like [Cucurbita moschata]3.7e-1654.84Show/hide
Query:  PKKPRWTRGMPMVLTYAFFKDNLISNLSLKDVRAVFRNASLKWAHVIPVSFRRPTTMGTPILKSGLQRRSQ-RGAGVQWRVGCFGAFFFPEIG
        P KPRWTR MPMVLTYAFFK+N +SNLSLKDV+ VFR A  KWAHVIPV F      G   +K G  R     G      +G     F PEIG
Subjt:  PKKPRWTRGMPMVLTYAFFKDNLISNLSLKDVRAVFRNASLKWAHVIPVSFRRPTTMGTPILKSGLQRRSQ-RGAGVQWRVGCFGAFFFPEIG

XP_038903989.1 metalloendoproteinase 4-MMP-like [Benincasa hispida]3.3e-1756.99Show/hide
Query:  PKKPRWTRGMPMVLTYAFFKDNLISNLSLKDVRAVFRNASLKWAHVIPVSFRRPTTMGTPILKSGLQRRSQR-GAGVQWRVGCFGAFFFPEIG
        P KPRWTR MPMVLTYAFF++N ISNLSLKDVRAVFR A  KWAHVIPV F      G   +K G  R     G      +G     F PEIG
Subjt:  PKKPRWTRGMPMVLTYAFFKDNLISNLSLKDVRAVFRNASLKWAHVIPVSFRRPTTMGTPILKSGLQRRSQR-GAGVQWRVGCFGAFFFPEIG

TrEMBL top hitse value%identityAlignment
A0A0A0L2Y8 ZnMc domain-containing protein3.3e-1858.06Show/hide
Query:  PKKPRWTRGMPMVLTYAFFKDNLISNLSLKDVRAVFRNASLKWAHVIPVSFRRPTTMGTPILKSGLQRRSQR-GAGVQWRVGCFGAFFFPEIG
        P KPRWTR MPMVLTYAFFKDN +SNLSL+DVRAVFR A  KWAHVIPVSF      G   +K G  R     G      +G     F PEIG
Subjt:  PKKPRWTRGMPMVLTYAFFKDNLISNLSLKDVRAVFRNASLKWAHVIPVSFRRPTTMGTPILKSGLQRRSQR-GAGVQWRVGCFGAFFFPEIG

A0A1S3AUH8 metalloendoproteinase 4-MMP1.2e-1756.99Show/hide
Query:  PKKPRWTRGMPMVLTYAFFKDNLISNLSLKDVRAVFRNASLKWAHVIPVSFRRPTTMGTPILKSGLQRRSQR-GAGVQWRVGCFGAFFFPEIG
        P KPRW R MPMVLTYAFFK+N +SNLSLKDVRAVFR A  KWAHVIPVSF      G   +K G  R     G      +G     F PEIG
Subjt:  PKKPRWTRGMPMVLTYAFFKDNLISNLSLKDVRAVFRNASLKWAHVIPVSFRRPTTMGTPILKSGLQRRSQR-GAGVQWRVGCFGAFFFPEIG

A0A5D3DB58 Metalloendoproteinase 4-MMP1.2e-1756.99Show/hide
Query:  PKKPRWTRGMPMVLTYAFFKDNLISNLSLKDVRAVFRNASLKWAHVIPVSFRRPTTMGTPILKSGLQRRSQR-GAGVQWRVGCFGAFFFPEIG
        P KPRW R MPMVLTYAFFK+N +SNLSLKDVRAVFR A  KWAHVIPVSF      G   +K G  R     G      +G     F PEIG
Subjt:  PKKPRWTRGMPMVLTYAFFKDNLISNLSLKDVRAVFRNASLKWAHVIPVSFRRPTTMGTPILKSGLQRRSQR-GAGVQWRVGCFGAFFFPEIG

A0A6J1FZ72 metalloendoproteinase 4-MMP-like1.8e-1654.84Show/hide
Query:  PKKPRWTRGMPMVLTYAFFKDNLISNLSLKDVRAVFRNASLKWAHVIPVSFRRPTTMGTPILKSGLQRRSQ-RGAGVQWRVGCFGAFFFPEIG
        P KPRWTR MPMVLTYAFFK+N +SNLSLKDV+ VFR A  KWAHVIPV F      G   +K G  R     G      +G     F PEIG
Subjt:  PKKPRWTRGMPMVLTYAFFKDNLISNLSLKDVRAVFRNASLKWAHVIPVSFRRPTTMGTPILKSGLQRRSQ-RGAGVQWRVGCFGAFFFPEIG

A0A6J1IFQ0 metalloendoproteinase 4-MMP-like6.8e-1654.84Show/hide
Query:  PKKPRWTRGMPMVLTYAFFKDNLISNLSLKDVRAVFRNASLKWAHVIPVSFRRPTTMGTPILKSGLQRRSQ-RGAGVQWRVGCFGAFFFPEIG
        P KPRWTR MPMVLTYAF K+N ISNLSLKDV+ VFR A  KWAHVIPV F      G   +K G  R     G      +G     F PEIG
Subjt:  PKKPRWTRGMPMVLTYAFFKDNLISNLSLKDVRAVFRNASLKWAHVIPVSFRRPTTMGTPILKSGLQRRSQ-RGAGVQWRVGCFGAFFFPEIG

SwissProt top hitse value%identityAlignment
Q8GWW6 Metalloendoproteinase 4-MMP7.0e-1058.82Show/hide
Query:  PKKPRWTRGMPMVLTYAFFKDNLISNLSLKDVRAVFRNASLKWAHVIPVSF
        P +PRWTR +P+ LTYAF ++NL   L+  D+R VFR A  KWA VIPVSF
Subjt:  PKKPRWTRGMPMVLTYAFFKDNLISNLSLKDVRAVFRNASLKWAHVIPVSF

Arabidopsis top hitse value%identityAlignment
AT2G45040.1 Matrixin family protein5.0e-1158.82Show/hide
Query:  PKKPRWTRGMPMVLTYAFFKDNLISNLSLKDVRAVFRNASLKWAHVIPVSF
        P +PRWTR +P+ LTYAF ++NL   L+  D+R VFR A  KWA VIPVSF
Subjt:  PKKPRWTRGMPMVLTYAFFKDNLISNLSLKDVRAVFRNASLKWAHVIPVSF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACTCAGCCGAGGAGCAGACAGCCCAAGTTAATGTAATGGGCCGAATAAAGCGCCTCAATATCATTTTGCATCTTTCCTATAATGCCCCTATCAGATGTCCA
AAAAAGCCACGTTGGACGCGGGGAATGCCGATGGTGCTGACGTACGCATTTTTCAAGGACAATTTGATAAGCAACTTGAGTTTAAAAGACGTGAGAGCCGTATTT
CGTAACGCATCATTGAAATGGGCCCACGTGATTCCGGTGAGTTTCAGGAGACCGACGACTATGGGTACGCCGATATTAAAATCGGGTTTACAGAGGCGATCACAG
CGAGGGGCAGGCGTTCAATGGCGCGTTGGGTGTTTTGGCGCATTCTTTTTCCCTGAGATTGGGATGCGGCGGAGACGTGGGCGATGGCGACGCACGAGAATGGTC
ATTTGTTGGGGCTGGGTCACAGCACAAGACATCCTTGAGGAGCTTGTAGCGGCGTGGAGCAGGGCGAGGGGAGGGGAATCCGGCGCCGGAGCTTCTTCTTTGCGT
GATCTGATCCTTGTGGGAGGTAGTACCGGTATTATTAGTCGTAGTTGTAGAGGCAGGGCGGCGGGTTATCTGTTGGCTTCGACACCAATCGCATATTTGAAGTAT
GGATTGATCCCCACAGTAGTAGTTGCTGCAGTAACTGAAGTAATTACAAAATGTAAGTTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGACTCAGCCGAGGAGCAGACAGCCCAAGTTAATGTAATGGGCCGAATAAAGCGCCTCAATATCATTTTGCATCTTTCCTATAATGCCCCTATCAGATGTCCA
AAAAAGCCACGTTGGACGCGGGGAATGCCGATGGTGCTGACGTACGCATTTTTCAAGGACAATTTGATAAGCAACTTGAGTTTAAAAGACGTGAGAGCCGTATTT
CGTAACGCATCATTGAAATGGGCCCACGTGATTCCGGTGAGTTTCAGGAGACCGACGACTATGGGTACGCCGATATTAAAATCGGGTTTACAGAGGCGATCACAG
CGAGGGGCAGGCGTTCAATGGCGCGTTGGGTGTTTTGGCGCATTCTTTTTCCCTGAGATTGGGATGCGGCGGAGACGTGGGCGATGGCGACGCACGAGAATGGTC
ATTTGTTGGGGCTGGGTCACAGCACAAGACATCCTTGAGGAGCTTGTAGCGGCGTGGAGCAGGGCGAGGGGAGGGGAATCCGGCGCCGGAGCTTCTTCTTTGCGT
GATCTGATCCTTGTGGGAGGTAGTACCGGTATTATTAGTCGTAGTTGTAGAGGCAGGGCGGCGGGTTATCTGTTGGCTTCGACACCAATCGCATATTTGAAGTAT
GGATTGATCCCCACAGTAGTAGTTGCTGCAGTAACTGAAGTAATTACAAAATGTAAGTTTTAA
Protein sequenceShow/hide protein sequence
MDSAEEQTAQVNVMGRIKRLNIILHLSYNAPIRCPKKPRWTRGMPMVLTYAFFKDNLISNLSLKDVRAVFRNASLKWAHVIPVSFRRPTTMGTPILKSGLQRRSQ
RGAGVQWRVGCFGAFFFPEIGMRRRRGRWRRTRMVICWGWVTAQDILEELVAAWSRARGGESGAGASSLRDLILVGGSTGIISRSCRGRAAGYLLASTPIAYLKY
GLIPTVVVAAVTEVITKCKF