; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CaUC05G079960 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC05G079960
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
Descriptionnon-specific lipid-transfer protein-like
Genome locationCiama_Chr05:934673..936366
RNA-Seq ExpressionCaUC05G079960
SyntenyCaUC05G079960
Gene Ontology termsGO:0006869 - lipid transport (biological process)
GO:0008289 - lipid binding (molecular function)
InterPro domainsIPR000528 - Plant non-specific lipid-transfer protein/Par allergen
IPR016140 - Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain
IPR036312 - Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7019070.1 Thioredoxin-like 2-2, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]1.8e-5975Show/hide
Query:  GTFNRRSTMGGVAFVAVLICSLMVGLSQNEDVESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKKLVGDAKTKKDKVALCECIKKSLSMIGPYD
        G F+ RST+G +AFVA+  CS MV LSQ+ DVE+C+PV QELSPCLGFIKGSDSAFGGENPSPSCC+GV KLV DAKTKK +V LCECIK SLSMIGPYD
Subjt:  GTFNRRSTMGGVAFVAVLICSLMVGLSQNEDVESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKKLVGDAKTKKDKVALCECIKKSLSMIGPYD

Query:  PSRIPLIPKECGIPIQIPPIDNSTDCSTVEGFQFGTAFLYDIGDNHHH
        PSRIPLIP++CGIP QIPPID+STDCS  E +QFG+AF Y++ DNH+H
Subjt:  PSRIPLIPKECGIPIQIPPIDNSTDCSTVEGFQFGTAFLYDIGDNHHH

XP_022924453.1 non-specific lipid-transfer protein-like [Cucurbita moschata]2.5e-6176Show/hide
Query:  MSGTFNRRSTMGGVAFVAVLICSLMVGLSQNEDVESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKKLVGDAKTKKDKVALCECIKKSLSMIGP
        MSG F+ RST+G +AFVA+  CS MV LSQ+ DVE+C+PV QELSPCLGFIKGSDSAFGGENPSPSCC+GV KLV DAKTKKD+V LCECIK SLSMIGP
Subjt:  MSGTFNRRSTMGGVAFVAVLICSLMVGLSQNEDVESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKKLVGDAKTKKDKVALCECIKKSLSMIGP

Query:  YDPSRIPLIPKECGIPIQIPPIDNSTDCSTVEGFQFGTAFLYDIGDNHHH
        YDPSRIPLIP++CGIP QIPPID+STDCS  E +QFG+AF Y++ DNH+H
Subjt:  YDPSRIPLIPKECGIPIQIPPIDNSTDCSTVEGFQFGTAFLYDIGDNHHH

XP_022980045.1 non-specific lipid-transfer protein-like [Cucurbita maxima]1.2e-6075.33Show/hide
Query:  MSGTFNRRSTMGGVAFVAVLICSLMVGLSQNEDVESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKKLVGDAKTKKDKVALCECIKKSLSMIGP
        MSG F+ RST+G +AFVA+ IC  MV LSQ+ DVE+C+PV QELSPCLGFIKGSDS FGGENPSPSCC+GV KLV DAKTKKD+V LCECIK SLSMIGP
Subjt:  MSGTFNRRSTMGGVAFVAVLICSLMVGLSQNEDVESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKKLVGDAKTKKDKVALCECIKKSLSMIGP

Query:  YDPSRIPLIPKECGIPIQIPPIDNSTDCSTVEGFQFGTAFLYDIGDNHHH
        YDPSRIPLIP++CGIP QIPPID+STDCS  EG+QFG+AF  ++ DNH+H
Subjt:  YDPSRIPLIPKECGIPIQIPPIDNSTDCSTVEGFQFGTAFLYDIGDNHHH

XP_023526882.1 non-specific lipid-transfer protein-like [Cucurbita pepo subsp. pepo]7.9e-6074.67Show/hide
Query:  MSGTFNRRSTMGGVAFVAVLICSLMVGLSQNEDVESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKKLVGDAKTKKDKVALCECIKKSLSMIGP
        MSG F+ RST+G +AFVA+ IC  MV LSQ+ DVE+C+PV QELSPCLGFIKGSDS FGGENPS SCC+GV KLV DAKTKKD+V LCECIK SLSMIGP
Subjt:  MSGTFNRRSTMGGVAFVAVLICSLMVGLSQNEDVESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKKLVGDAKTKKDKVALCECIKKSLSMIGP

Query:  YDPSRIPLIPKECGIPIQIPPIDNSTDCSTVEGFQFGTAFLYDIGDNHHH
        YDPSRIPLIP++CGIP QIPPID+STDCS  E +QFG+AF Y++ DNH+H
Subjt:  YDPSRIPLIPKECGIPIQIPPIDNSTDCSTVEGFQFGTAFLYDIGDNHHH

XP_038891281.1 non-specific lipid-transfer protein Cw18-like [Benincasa hispida]2.4e-7290Show/hide
Query:  MSGTFNRRSTMGGVAFVAVLICSLMVGLSQNEDVESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKKLVGDAKTKKDKVALCECIKKSLSMIGP
        MSG FN RSTMG +AFVAVL CSLMV LSQNEDVESCVPVAQELSPCLGFIKGSDSAFGGE+PSPSCCSGVKKLVGDAKTKKDKV LCECIKKSLSMIGP
Subjt:  MSGTFNRRSTMGGVAFVAVLICSLMVGLSQNEDVESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKKLVGDAKTKKDKVALCECIKKSLSMIGP

Query:  YDPSRIPLIPKECGIPIQIPPIDNSTDCSTVEGFQFGTAFLYDIGDNHHH
        YDPSRIPLIPKECGIP+QIPPIDNSTDCS VEG QFG+AFLY +GD HHH
Subjt:  YDPSRIPLIPKECGIPIQIPPIDNSTDCSTVEGFQFGTAFLYDIGDNHHH

TrEMBL top hitse value%identityAlignment
A0A5A7U0R4 Non-specific lipid-transfer protein2.4e-5473.33Show/hide
Query:  MSGTFNRRSTMGGVAFVAVLICSLMVGLSQNEDVESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKKLVGDAKTKKDKVALCECIKKSLSMIGP
        MSG FN RS    +AFVAVL CSLMV LSQ EDVESCVPVAQ LSPCLGFIKGS        PS SCCSGVK+L G+ KTKKDKVALCECIKKSL+MIGP
Subjt:  MSGTFNRRSTMGGVAFVAVLICSLMVGLSQNEDVESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKKLVGDAKTKKDKVALCECIKKSLSMIGP

Query:  YDPSRIPLIPKECGIPIQIPPIDNSTDCSTVEGFQFGTAFLYDIGDNHHH
        YDP+RIPLIPK+CGI +QIPPI+NST+CS V+GFQFG+A +Y+ G  HHH
Subjt:  YDPSRIPLIPKECGIPIQIPPIDNSTDCSTVEGFQFGTAFLYDIGDNHHH

A0A6J1ECH4 non-specific lipid-transfer protein-like1.2e-6176Show/hide
Query:  MSGTFNRRSTMGGVAFVAVLICSLMVGLSQNEDVESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKKLVGDAKTKKDKVALCECIKKSLSMIGP
        MSG F+ RST+G +AFVA+  CS MV LSQ+ DVE+C+PV QELSPCLGFIKGSDSAFGGENPSPSCC+GV KLV DAKTKKD+V LCECIK SLSMIGP
Subjt:  MSGTFNRRSTMGGVAFVAVLICSLMVGLSQNEDVESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKKLVGDAKTKKDKVALCECIKKSLSMIGP

Query:  YDPSRIPLIPKECGIPIQIPPIDNSTDCSTVEGFQFGTAFLYDIGDNHHH
        YDPSRIPLIP++CGIP QIPPID+STDCS  E +QFG+AF Y++ DNH+H
Subjt:  YDPSRIPLIPKECGIPIQIPPIDNSTDCSTVEGFQFGTAFLYDIGDNHHH

A0A6J1FDZ9 non-specific lipid-transfer protein 3-like2.3e-5267.33Show/hide
Query:  MSGTFNRRSTMGGVAFVAVLICSLMVGLSQNEDVESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKKLVGDAKTKKDKVALCECIKKSLSMIGP
        MSG +N R  +  + F+A+L  S+MV LSQN D+ SC+ VAQELSPCL FIKGSD  F GENP PSCCSGV KL  DAKTK DKV LCECIKKSLSMIG 
Subjt:  MSGTFNRRSTMGGVAFVAVLICSLMVGLSQNEDVESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKKLVGDAKTKKDKVALCECIKKSLSMIGP

Query:  YDPSRIPLIPKECGIPIQIPPIDNSTDCSTVEGFQFGTAFLYDIGDNHHH
        YDP+RIP IP+ CGIP+QIPPIDNST+CS VEGF+FG+    ++G+ HHH
Subjt:  YDPSRIPLIPKECGIPIQIPPIDNSTDCSTVEGFQFGTAFLYDIGDNHHH

A0A6J1IBN9 non-specific lipid-transfer protein 3-like2.9e-5267.79Show/hide
Query:  MSGTFNRRSTMGGVAFVAVLICSLMVGLSQNEDVESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKKLVGDAKTKKDKVALCECIKKSLSMIGP
        MSG +N R  +  + F+A+L  S+MV LSQN D+ SC+ VAQELSPCL FIKGSD  F GENP PSCCSGV KL  DAKTK DKV LCECIKKSLSMIG 
Subjt:  MSGTFNRRSTMGGVAFVAVLICSLMVGLSQNEDVESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKKLVGDAKTKKDKVALCECIKKSLSMIGP

Query:  YDPSRIPLIPKECGIPIQIPPIDNSTDCSTVEGFQFGTAFLYDIGDNHH
        YDP+RIP IP+ CGIP+QIPPIDNSTDCS VEGF+FG+    ++G+ HH
Subjt:  YDPSRIPLIPKECGIPIQIPPIDNSTDCSTVEGFQFGTAFLYDIGDNHH

A0A6J1IV21 non-specific lipid-transfer protein-like5.9e-6175.33Show/hide
Query:  MSGTFNRRSTMGGVAFVAVLICSLMVGLSQNEDVESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKKLVGDAKTKKDKVALCECIKKSLSMIGP
        MSG F+ RST+G +AFVA+ IC  MV LSQ+ DVE+C+PV QELSPCLGFIKGSDS FGGENPSPSCC+GV KLV DAKTKKD+V LCECIK SLSMIGP
Subjt:  MSGTFNRRSTMGGVAFVAVLICSLMVGLSQNEDVESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKKLVGDAKTKKDKVALCECIKKSLSMIGP

Query:  YDPSRIPLIPKECGIPIQIPPIDNSTDCSTVEGFQFGTAFLYDIGDNHHH
        YDPSRIPLIP++CGIP QIPPID+STDCS  EG+QFG+AF  ++ DNH+H
Subjt:  YDPSRIPLIPKECGIPIQIPPIDNSTDCSTVEGFQFGTAFLYDIGDNHHH

SwissProt top hitse value%identityAlignment
A0AT28 Non-specific lipid-transfer protein 13.6e-1535.59Show/hide
Query:  VAFVAVLICSLMVGLSQNEDVESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKKLVGDAKTKKDKVALCECIKKSLSMIGPYDPSRIPLIPKEC
        V+ +  L+C +++     E   SC  V+  L PCL ++K      GG  PSP CC GVK+L G A+T  D+ A C C+K S   I    P  +  +P +C
Subjt:  VAFVAVLICSLMVGLSQNEDVESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKKLVGDAKTKKDKVALCECIKKSLSMIGPYDPSRIPLIPKEC

Query:  GIPIQIPPIDNSTDCSTV
        G+ +    I  ST+C+T+
Subjt:  GIPIQIPPIDNSTDCSTV

A0AT32 Non-specific lipid-transfer protein 65.2e-1436.84Show/hide
Query:  VLICSLMVGLSQNEDVESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKKLVGDAKTKKDKVALCECIKKSLSMIGPYDPSRIPLIPKECGIPIQ
        VL+  ++V     E   SC  V  +LSPCL ++       GG  PSP CC GVKKL+  A T  D+ A C C+K +   I   + +    +P +CG+ I 
Subjt:  VLICSLMVGLSQNEDVESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKKLVGDAKTKKDKVALCECIKKSLSMIGPYDPSRIPLIPKECGIPIQ

Query:  IPPIDNSTDCSTVE
           I  ST+C+TV+
Subjt:  IPPIDNSTDCSTVE

O04004 Non-specific lipid-transfer protein4.7e-1541.49Show/hide
Query:  SCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKKLVGDAKTKKDKVALCECIKKSLSMIGPYDPSRIPLIPKECGIPIQIPPIDNSTDCS
        +C  V   L+PC GF+        G+ PS +CC+GV  L    KTK D+VA+C CIK+    I  YDP R+PL+  +CG+    P +D + DCS
Subjt:  SCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKKLVGDAKTKKDKVALCECIKKSLSMIGPYDPSRIPLIPKECGIPIQIPPIDNSTDCS

O04404 Probable non-specific lipid-transfer protein 15.2e-1438.78Show/hide
Query:  ESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKKLVGDAKTKKDKVALCECIKKSLSMIGPYDPSRIPLIPKECGI-PIQIPPIDNSTDCSTV
        E+C  V + L PCL F++G +     + PS  CCSG K+L G+ KT   +V  CECI+ ++      D   +  +PK CGI   ++PPID + DC T+
Subjt:  ESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKKLVGDAKTKKDKVALCECIKKSLSMIGPYDPSRIPLIPKECGI-PIQIPPIDNSTDCSTV

P43217 Probable non-specific lipid-transfer protein (Fragment)4.0e-1438.78Show/hide
Query:  ESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKKLVGDAKTKKDKVALCECIKKSLSMIGPYDPSRIPLIPKECGI-PIQIPPIDNSTDCSTV
        E+C  + + L PCL F++G +     + PS  CCSG K+L G+ KT   +V  CECI+ ++      D   +  +PK CGI   ++PPID + DC TV
Subjt:  ESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKKLVGDAKTKKDKVALCECIKKSLSMIGPYDPSRIPLIPKECGI-PIQIPPIDNSTDCSTV

Arabidopsis top hitse value%identityAlignment
AT3G08770.1 lipid transfer protein 69.8e-0829.66Show/hide
Query:  VLICSLMVGLSQNEDVESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKKLVGDAKTKKDKVALCECIKKSLS--MIGPYDPSRIPLIPKECGI-
        +L   L++ L   E   SC  V  +L PCL ++       GG  P+  CC+G+  L   A+T  D+  +C CIK ++    + P        +P +CG+ 
Subjt:  VLICSLMVGLSQNEDVESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKKLVGDAKTKKDKVALCECIKKSLS--MIGPYDPSRIPLIPKECGI-

Query:  -PIQIPPIDNSTDCSTVE
         P +  P   STDC +++
Subjt:  -PIQIPPIDNSTDCSTVE

AT3G08770.2 lipid transfer protein 64.9e-0730.17Show/hide
Query:  VLICSLMVGLSQNEDVESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKKLVGDAKTKKDKVALCECIKKSLS--MIGPYDPSRIPLIPKECGI-
        +L   L++ L   E   SC  V  +L PCL ++       GG  P+  CC+G+  L   A+T  D+  +C CIK ++    + P        +P +CG+ 
Subjt:  VLICSLMVGLSQNEDVESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKKLVGDAKTKKDKVALCECIKKSLS--MIGPYDPSRIPLIPKECGI-

Query:  -PIQIPPIDNSTDCST
         P +  P   STDC +
Subjt:  -PIQIPPIDNSTDCST

AT3G51600.1 lipid transfer protein 52.2e-0730.7Show/hide
Query:  VLICSLMVGLSQNEDVESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKKLVGDAKTKKDKVALCECIKKSLSMIGP-YDPSRIPLIPKECGIPI
        V++C L+     +E   SC  V   L  C  ++       GG  P   CCSGV++L   A+T +D+   C CI+ +   +G   +  R   +P  C + I
Subjt:  VLICSLMVGLSQNEDVESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKKLVGDAKTKKDKVALCECIKKSLSMIGP-YDPSRIPLIPKECGIPI

Query:  QIPPIDNSTDCSTV
           PI   T+C+TV
Subjt:  QIPPIDNSTDCSTV

AT5G01870.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein4.9e-0730.89Show/hide
Query:  VAVLICSLMVGLSQ--NEDVESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKKLVGDAKTKKDKVALCECIKKSLSMIGPYDPSRIPL-----I
        V + +C L+  +    +E   SC  V   L PC+ ++       GG  P  SCC+G++ L   A +  DK  +C CIK   S++G    S I L     +
Subjt:  VAVLICSLMVGLSQ--NEDVESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKKLVGDAKTKKDKVALCECIKKSLSMIGPYDPSRIPL-----I

Query:  PKECGIPIQIPPIDNSTDCSTVE
        P +CG+ +    ID ST+C++++
Subjt:  PKECGIPIQIPPIDNSTDCSTVE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAGGAACCTTCAATCGCCGGTCGACGATGGGGGGCGTAGCCTTCGTCGCCGTGTTGATATGCTCCCTGATGGTCGGTCTGTCTCAGAATGAGGATGTGGAA
AGTTGTGTACCGGTGGCGCAGGAGCTATCACCATGCTTGGGCTTCATTAAAGGCAGCGACAGCGCCTTTGGTGGTGAAAATCCGTCGCCGTCGTGCTGCAGCGGC
GTTAAAAAGTTGGTGGGCGATGCTAAAACGAAGAAAGATAAGGTTGCTCTGTGCGAATGCATCAAGAAGAGTTTGTCAATGATCGGACCTTATGATCCGAGTCGC
ATCCCTTTGATTCCAAAAGAATGCGGAATTCCCATCCAAATTCCTCCCATCGACAATTCCACCGACTGCTCAACGGTTGAGGGCTTTCAATTTGGAACAGCTTTC
TTATATGATATTGGGGATAACCATCATCATTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCAGGAACCTTCAATCGCCGGTCGACGATGGGGGGCGTAGCCTTCGTCGCCGTGTTGATATGCTCCCTGATGGTCGGTCTGTCTCAGAATGAGGATGTGGAA
AGTTGTGTACCGGTGGCGCAGGAGCTATCACCATGCTTGGGCTTCATTAAAGGCAGCGACAGCGCCTTTGGTGGTGAAAATCCGTCGCCGTCGTGCTGCAGCGGC
GTTAAAAAGTTGGTGGGCGATGCTAAAACGAAGAAAGATAAGGTTGCTCTGTGCGAATGCATCAAGAAGAGTTTGTCAATGATCGGACCTTATGATCCGAGTCGC
ATCCCTTTGATTCCAAAAGAATGCGGAATTCCCATCCAAATTCCTCCCATCGACAATTCCACCGACTGCTCAACGGTTGAGGGCTTTCAATTTGGAACAGCTTTC
TTATATGATATTGGGGATAACCATCATCATTGA
Protein sequenceShow/hide protein sequence
MSGTFNRRSTMGGVAFVAVLICSLMVGLSQNEDVESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKKLVGDAKTKKDKVALCECIKKSLSMIGPYDPSR
IPLIPKECGIPIQIPPIDNSTDCSTVEGFQFGTAFLYDIGDNHHH