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CaUC05G080260 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC05G080260
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionUnknown protein
Genome locationCiama_Chr05:1229546..1232796
RNA-Seq ExpressionCaUC05G080260
SyntenyCaUC05G080260
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6597110.1 hypothetical protein SDJN03_10290, partial [Cucurbita argyrosperma subsp. sororia]2.7e-2156.8Show/hide
Query:  MMMEATGNENNSKEEQDLRE----------GNGEAMESSSSSSFLQDLNLLFVLLSLISPDSNEDSNGGNGESMRMKELEVSTTYNIARSSVRKKDVIEA
        MM E   NE++ KEEQ++R+          G+G      SSSSFL ++NL+FVLLSL+   S+EDSNG  GE  + KE+E  TTYNIARSSV+KKDVIEA
Subjt:  MMMEATGNENNSKEEQDLRE----------GNGEAMESSSSSSFLQDLNLLFVLLSLISPDSNEDSNGGNGESMRMKELEVSTTYNIARSSVRKKDVIEA

Query:  NHESRRRLPQKSYTTIKDHRHGRKM
          E RRR+ Q+ +TTIKDHRHGRKM
Subjt:  NHESRRRLPQKSYTTIKDHRHGRKM

KAG7028573.1 hypothetical protein SDJN02_09754, partial [Cucurbita argyrosperma subsp. argyrosperma]1.9e-1954.84Show/hide
Query:  MMEATGNENNSKEEQDLRE----------GNGEAMESSSSSSFLQDLNLLFVLLSLISPDSNEDSNGGNGESMRMKELEVSTTYNIARSSVRKKDVIEAN
        M E   NE++ KEEQ++R+          G+G      SSSSFL ++NL+FVLLSL+   S+E+SNG  GE  + KE+E  TTYNIARSSV+KKDVIEA 
Subjt:  MMEATGNENNSKEEQDLRE----------GNGEAMESSSSSSFLQDLNLLFVLLSLISPDSNEDSNGGNGESMRMKELEVSTTYNIARSSVRKKDVIEAN

Query:  HESRRRLPQKSYTTIKDHRHGRKM
         E R R+ Q+ +TTIKDHRHGRKM
Subjt:  HESRRRLPQKSYTTIKDHRHGRKM

KGN56466.1 hypothetical protein Csa_011060 [Cucumis sativus]4.8e-3472.65Show/hide
Query:  MMEATGNENNSKEEQDLRE--GNGE-AMESSSSSSFLQDLNLLFVLLSLISPDSNEDSNGGNGESMRMKELEVSTTYNIARSSVRKKDVIEANHESRRRL
        M+E  GNEN+ K++Q++RE   NGE  +ESSSSSSFL DLNLLFV LSLISP++NEDSN GNG SM+MKE+E STTYNIA+SS+RKKDVIEA HESRR++
Subjt:  MMEATGNENNSKEEQDLRE--GNGE-AMESSSSSSFLQDLNLLFVLLSLISPDSNEDSNGGNGESMRMKELEVSTTYNIARSSVRKKDVIEANHESRRRL

Query:  PQKSYTTIKDHRHGRKM
        PQ+ +TTIKDHRHGRKM
Subjt:  PQKSYTTIKDHRHGRKM

TrEMBL top hitse value%identityAlignment
A0A0A0L8Q3 Uncharacterized protein2.3e-3472.65Show/hide
Query:  MMEATGNENNSKEEQDLRE--GNGE-AMESSSSSSFLQDLNLLFVLLSLISPDSNEDSNGGNGESMRMKELEVSTTYNIARSSVRKKDVIEANHESRRRL
        M+E  GNEN+ K++Q++RE   NGE  +ESSSSSSFL DLNLLFV LSLISP++NEDSN GNG SM+MKE+E STTYNIA+SS+RKKDVIEA HESRR++
Subjt:  MMEATGNENNSKEEQDLRE--GNGE-AMESSSSSSFLQDLNLLFVLLSLISPDSNEDSNGGNGESMRMKELEVSTTYNIARSSVRKKDVIEANHESRRRL

Query:  PQKSYTTIKDHRHGRKM
        PQ+ +TTIKDHRHGRKM
Subjt:  PQKSYTTIKDHRHGRKM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGAATGACCAAAAAATCAACTAGTAAAATGATGATGGAAGCTACTGGAAATGAAAACAATTCTAAAGAAGAGCAAGATTTGAGAGAAGGAAATGGAGAAGCCATGGA
ATCGAGTTCAAGTTCGTCATTTCTACAAGATTTGAACCTTCTATTTGTGCTTCTTTCATTGATTTCTCCAGATTCAAATGAAGATTCAAATGGTGGCAATGGTGAATCAA
TGAGAATGAAAGAACTTGAAGTTAGTACAACTTACAATATTGCACGATCAAGTGTAAGAAAGAAAGATGTTATTGAAGCCAATCATGAAAGTCGTCGACGATTACCTCAA
AAATCTTATACAACAATAAAGGATCACAGGCATGGGAGAAAAATGTGA
mRNA sequenceShow/hide mRNA sequence
ATAAAGGCAAGGACATGCGAATGACCAAAAAATCAACTAGTAAAATGATGATGGAAGCTACTGGAAATGAAAACAATTCTAAAGAAGAGCAAGATTTGAGAGAAGGAAAT
GGAGAAGCCATGGAATCGAGTTCAAGTTCGTCATTTCTACAAGATTTGAACCTTCTATTTGTGCTTCTTTCATTGATTTCTCCAGATTCAAATGAAGATTCAAATGGTGG
CAATGGTGAATCAATGAGAATGAAAGAACTTGAAGTTAGTACAACTTACAATATTGCACGATCAAGTGTAAGAAAGAAAGATGTTATTGAAGCCAATCATGAAAGTCGTC
GACGATTACCTCAAAAATCTTATACAACAATAAAGGATCACAGGCATGGGAGAAAAATGTGAAGCAATAATCAATGAAGAAAGACGAATGGACATTAAGAAGAGATGGGA
ATATATGTTGCGACTAATATAGATAACCACTTATTTAAAAGTTTTGGCATCATCAACACATGAAGAAGATGCTCGAGTGATGTTTTGAAATTCTTCCTGTTAAATGAAAT
ATATTTTATCATTAACTAAAAGTTAATATGGCAATATTTTAAAATACAACGGTATGGAACTTGAATCTCCATCCTCAAAAATAGAATACATGTTAATTGTCATTTATATG
GCAAGTTAATATCAACAAGG
Protein sequenceShow/hide protein sequence
MRMTKKSTSKMMMEATGNENNSKEEQDLREGNGEAMESSSSSSFLQDLNLLFVLLSLISPDSNEDSNGGNGESMRMKELEVSTTYNIARSSVRKKDVIEANHESRRRLPQ
KSYTTIKDHRHGRKM