; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CaUC05G082500 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC05G082500
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionRING-type domain-containing protein
Genome locationCiama_Chr05:3164884..3168941
RNA-Seq ExpressionCaUC05G082500
SyntenyCaUC05G082500
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type
IPR017907 - Zinc finger, RING-type, conserved site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004133986.1 uncharacterized protein LOC101211386 [Cucumis sativus]5.7e-11890.91Show/hide
Query:  MSIQSSNDLRDWSERVVERRTVLDFDLNCPPPDECIDPTGPRDEAAQYYNHYQGQAMDAIDEDIAIISPRKFAEARKNFRRNHFDSSCGVVIRRNGNTEV
        MSIQSSNDL DWS RV+ERRTVLDFDLNCPPPDECIDPTG  DEAAQYYNHYQGQA DAIDEDIAIISPRKFAEARKNFRRNHF+S CG VIRRNGNTEV
Subjt:  MSIQSSNDLRDWSERVVERRTVLDFDLNCPPPDECIDPTGPRDEAAQYYNHYQGQAMDAIDEDIAIISPRKFAEARKNFRRNHFDSSCGVVIRRNGNTEV

Query:  YGALSDVTSWPPFTIWSPRTINNNVSIQE-QTLHNLDLRLSCESSSRATKATIDTDIPSALALSSSIQPTDRTLRCAICIEPLVEETTTKCGHVFCRNCI
        YGALSDVT+WPPFTIWSP TI+NNVS+QE QT+HNLDLRLSCESSSRATKA  DTDIPS LALSSSI PTDRTLRCAICIEPLVEETTTKCGHVFCRNCI
Subjt:  YGALSDVTSWPPFTIWSPRTINNNVSIQE-QTLHNLDLRLSCESSSRATKATIDTDIPSALALSSSIQPTDRTLRCAICIEPLVEETTTKCGHVFCRNCI

Query:  ETAIATQHRCPICRRKLRKRDIIRIYLPFSS
        ETAIATQHRCPICRRKLR+RDIIRIYLPF+S
Subjt:  ETAIATQHRCPICRRKLRKRDIIRIYLPFSS

XP_008438340.1 PREDICTED: uncharacterized protein LOC103483470 [Cucumis melo]6.8e-11991.77Show/hide
Query:  MSIQSSNDLRDWSERVVERRTVLDFDLNCPPPDECIDPTGPRDEAAQYYNHYQGQAMDAIDEDIAIISPRKFAEARKNFRRNHFDSSCGVVIRRNGNTEV
        MSIQSSNDL DWS RV+ERRTVLDFDLNCPPPDECIDPTGPRDEAAQYYNHYQGQA DAIDEDIAIISPRKFAEARKNFRRNHF+S  G VIRRNGNTEV
Subjt:  MSIQSSNDLRDWSERVVERRTVLDFDLNCPPPDECIDPTGPRDEAAQYYNHYQGQAMDAIDEDIAIISPRKFAEARKNFRRNHFDSSCGVVIRRNGNTEV

Query:  YGALSDVTSWPPFTIWSPRTINNNVSIQE-QTLHNLDLRLSCESSSRATKATIDTDIPSALALSSSIQPTDRTLRCAICIEPLVEETTTKCGHVFCRNCI
        YGALSDVT+WPPFTIWSP TI+NNVS+QE QT+HNLDLRLSCESSSRATKA  DTDIPS LALSSSI PTDRTLRCAICIEPLVEETTTKCGHVFCRNCI
Subjt:  YGALSDVTSWPPFTIWSPRTINNNVSIQE-QTLHNLDLRLSCESSSRATKATIDTDIPSALALSSSIQPTDRTLRCAICIEPLVEETTTKCGHVFCRNCI

Query:  ETAIATQHRCPICRRKLRKRDIIRIYLPFSS
        ETAIATQHRCPICRRKLRKRDIIRIYLPF+S
Subjt:  ETAIATQHRCPICRRKLRKRDIIRIYLPFSS

XP_022147116.1 E3 ubiquitin-protein ligase complex slx8-rfp subunit slx8-like [Momordica charantia]3.3e-10582.48Show/hide
Query:  MSIQSSNDLRDWSERVVERRTVLDFDLNCPPPDECIDPTGPRDEAAQYYNHYQGQAM---DAIDEDIAIISPRKFAEARKNFRRNHFDSSCGVVIRRNGN
        MSIQ  NDL +W+ RVVERRTV+DFDLNCPPPDECI+PTGPR+EAAQ++NH+Q QA    D +DEDIAIISPRKFAEARKNFRRNHFDSSCGV +R N N
Subjt:  MSIQSSNDLRDWSERVVERRTVLDFDLNCPPPDECIDPTGPRDEAAQYYNHYQGQAM---DAIDEDIAIISPRKFAEARKNFRRNHFDSSCGVVIRRNGN

Query:  TEVYGALSDVTSWPPFTIWSPRTINNNVSIQEQTLHNLDLRLSCESSSRATKATIDTDIPSALALSSS-IQPTDRTLRCAICIEPLVEETTTKCGHVFCR
        TEVYGALSDVTSWPPFTIW P TINNNVSI+EQT+HNLDL LS ESSSRA     DTDIPSALA SSS I P   +LRCAICIEPLVEETTTKCGHVFCR
Subjt:  TEVYGALSDVTSWPPFTIWSPRTINNNVSIQEQTLHNLDLRLSCESSSRATKATIDTDIPSALALSSS-IQPTDRTLRCAICIEPLVEETTTKCGHVFCR

Query:  NCIETAIATQHRCPICRRKLRKRDIIRIYLPFSS
        NCIETAIATQHRCPICRRKLRKRDIIRIYLPFSS
Subjt:  NCIETAIATQHRCPICRRKLRKRDIIRIYLPFSS

XP_022980395.1 E3 ubiquitin-protein ligase complex slx8-rfp subunit slx8-like [Cucurbita maxima]7.3e-10582.68Show/hide
Query:  MSIQSSNDLRDWSERVVERRTVLDFDLNCPPPDECIDPTGPRDEAAQYYNHYQGQAMDAIDEDIAIISPRKFAEARKNFRRNHFDSSCGVVIRRNGNTEV
        MSIQS+NDL +   RVVERRT LD DLNCPPPDECIDPTGP DEAAQY NH++ QA DA+DEDIAIISPRKFAEARKNFRRNHF+SS GVV+RRNG+TEV
Subjt:  MSIQSSNDLRDWSERVVERRTVLDFDLNCPPPDECIDPTGPRDEAAQYYNHYQGQAMDAIDEDIAIISPRKFAEARKNFRRNHFDSSCGVVIRRNGNTEV

Query:  YGALSDVTSWPPFTIWSPRTINNNVSIQE-QTLHNLDLRLSCESSSRATKATIDTDIPSALALSSSIQPTDRTLRCAICIEPLVEETTTKCGHVFCRNCI
        Y AL+DV+SWPPFTIWSPRT  N+VSIQE QT HNLDLRLSCE+SSRATK   D DIPSA ALSSS+ P DR LRCAICIEPLVEETTTKCGH+FCRNCI
Subjt:  YGALSDVTSWPPFTIWSPRTINNNVSIQE-QTLHNLDLRLSCESSSRATKATIDTDIPSALALSSSIQPTDRTLRCAICIEPLVEETTTKCGHVFCRNCI

Query:  ETAIATQHRCPICRRKLRKRDIIRIYLPFSS
        E AIATQH+CPICRRKLRKRDIIRIYLPFSS
Subjt:  ETAIATQHRCPICRRKLRKRDIIRIYLPFSS

XP_038874295.1 uncharacterized protein LOC120067004 [Benincasa hispida]5.7e-11892.61Show/hide
Query:  MSIQSSNDLRDWSERVVERRTVLDFDLNCPPPDECIDPTGPRDEAAQYYNHYQGQAMDAIDEDIAIISPRKFAEARKNFRRNHFDSSCGVVIRRNGNTEV
        MSIQSSNDL DWS RVVERRTVLDFDLNCPPPDECIDPTGPRDEAAQYYNHYQGQA DAIDEDIAIISPRKFAEARKNFRRNHF+S CGVV+RRNGNTEV
Subjt:  MSIQSSNDLRDWSERVVERRTVLDFDLNCPPPDECIDPTGPRDEAAQYYNHYQGQAMDAIDEDIAIISPRKFAEARKNFRRNHFDSSCGVVIRRNGNTEV

Query:  YGALSDVTSWPPFTIWSPRTINNNVSIQEQTLHNLDLRLSCESSSRATKATIDTDIPSALALSSSIQPTDRTLRCAICIEPLVEETTTKCGHVFCRNCIE
        YGALSD TSWPPFTI SP TI+NNVSIQE+TLH+LDLRLSCESSSRATKAT DTDIPS +ALSSSI  TDRTLRCAICIEPLVEETTTKCGHVFCRNCIE
Subjt:  YGALSDVTSWPPFTIWSPRTINNNVSIQEQTLHNLDLRLSCESSSRATKATIDTDIPSALALSSSIQPTDRTLRCAICIEPLVEETTTKCGHVFCRNCIE

Query:  TAIATQHRCPICRRKLRKRDIIRIYLPFSS
        TAIATQHRCPICRRKLRKRDIIRIYLPFSS
Subjt:  TAIATQHRCPICRRKLRKRDIIRIYLPFSS

TrEMBL top hitse value%identityAlignment
A0A0A0L424 RING-type domain-containing protein2.8e-11890.91Show/hide
Query:  MSIQSSNDLRDWSERVVERRTVLDFDLNCPPPDECIDPTGPRDEAAQYYNHYQGQAMDAIDEDIAIISPRKFAEARKNFRRNHFDSSCGVVIRRNGNTEV
        MSIQSSNDL DWS RV+ERRTVLDFDLNCPPPDECIDPTG  DEAAQYYNHYQGQA DAIDEDIAIISPRKFAEARKNFRRNHF+S CG VIRRNGNTEV
Subjt:  MSIQSSNDLRDWSERVVERRTVLDFDLNCPPPDECIDPTGPRDEAAQYYNHYQGQAMDAIDEDIAIISPRKFAEARKNFRRNHFDSSCGVVIRRNGNTEV

Query:  YGALSDVTSWPPFTIWSPRTINNNVSIQE-QTLHNLDLRLSCESSSRATKATIDTDIPSALALSSSIQPTDRTLRCAICIEPLVEETTTKCGHVFCRNCI
        YGALSDVT+WPPFTIWSP TI+NNVS+QE QT+HNLDLRLSCESSSRATKA  DTDIPS LALSSSI PTDRTLRCAICIEPLVEETTTKCGHVFCRNCI
Subjt:  YGALSDVTSWPPFTIWSPRTINNNVSIQE-QTLHNLDLRLSCESSSRATKATIDTDIPSALALSSSIQPTDRTLRCAICIEPLVEETTTKCGHVFCRNCI

Query:  ETAIATQHRCPICRRKLRKRDIIRIYLPFSS
        ETAIATQHRCPICRRKLR+RDIIRIYLPF+S
Subjt:  ETAIATQHRCPICRRKLRKRDIIRIYLPFSS

A0A1S3AW86 uncharacterized protein LOC1034834703.3e-11991.77Show/hide
Query:  MSIQSSNDLRDWSERVVERRTVLDFDLNCPPPDECIDPTGPRDEAAQYYNHYQGQAMDAIDEDIAIISPRKFAEARKNFRRNHFDSSCGVVIRRNGNTEV
        MSIQSSNDL DWS RV+ERRTVLDFDLNCPPPDECIDPTGPRDEAAQYYNHYQGQA DAIDEDIAIISPRKFAEARKNFRRNHF+S  G VIRRNGNTEV
Subjt:  MSIQSSNDLRDWSERVVERRTVLDFDLNCPPPDECIDPTGPRDEAAQYYNHYQGQAMDAIDEDIAIISPRKFAEARKNFRRNHFDSSCGVVIRRNGNTEV

Query:  YGALSDVTSWPPFTIWSPRTINNNVSIQE-QTLHNLDLRLSCESSSRATKATIDTDIPSALALSSSIQPTDRTLRCAICIEPLVEETTTKCGHVFCRNCI
        YGALSDVT+WPPFTIWSP TI+NNVS+QE QT+HNLDLRLSCESSSRATKA  DTDIPS LALSSSI PTDRTLRCAICIEPLVEETTTKCGHVFCRNCI
Subjt:  YGALSDVTSWPPFTIWSPRTINNNVSIQE-QTLHNLDLRLSCESSSRATKATIDTDIPSALALSSSIQPTDRTLRCAICIEPLVEETTTKCGHVFCRNCI

Query:  ETAIATQHRCPICRRKLRKRDIIRIYLPFSS
        ETAIATQHRCPICRRKLRKRDIIRIYLPF+S
Subjt:  ETAIATQHRCPICRRKLRKRDIIRIYLPFSS

A0A5A7U158 E3 ubiquitin-protein ligase RNF4-like3.3e-11991.77Show/hide
Query:  MSIQSSNDLRDWSERVVERRTVLDFDLNCPPPDECIDPTGPRDEAAQYYNHYQGQAMDAIDEDIAIISPRKFAEARKNFRRNHFDSSCGVVIRRNGNTEV
        MSIQSSNDL DWS RV+ERRTVLDFDLNCPPPDECIDPTGPRDEAAQYYNHYQGQA DAIDEDIAIISPRKFAEARKNFRRNHF+S  G VIRRNGNTEV
Subjt:  MSIQSSNDLRDWSERVVERRTVLDFDLNCPPPDECIDPTGPRDEAAQYYNHYQGQAMDAIDEDIAIISPRKFAEARKNFRRNHFDSSCGVVIRRNGNTEV

Query:  YGALSDVTSWPPFTIWSPRTINNNVSIQE-QTLHNLDLRLSCESSSRATKATIDTDIPSALALSSSIQPTDRTLRCAICIEPLVEETTTKCGHVFCRNCI
        YGALSDVT+WPPFTIWSP TI+NNVS+QE QT+HNLDLRLSCESSSRATKA  DTDIPS LALSSSI PTDRTLRCAICIEPLVEETTTKCGHVFCRNCI
Subjt:  YGALSDVTSWPPFTIWSPRTINNNVSIQE-QTLHNLDLRLSCESSSRATKATIDTDIPSALALSSSIQPTDRTLRCAICIEPLVEETTTKCGHVFCRNCI

Query:  ETAIATQHRCPICRRKLRKRDIIRIYLPFSS
        ETAIATQHRCPICRRKLRKRDIIRIYLPF+S
Subjt:  ETAIATQHRCPICRRKLRKRDIIRIYLPFSS

A0A6J1D1D9 E3 ubiquitin-protein ligase complex slx8-rfp subunit slx8-like1.6e-10582.48Show/hide
Query:  MSIQSSNDLRDWSERVVERRTVLDFDLNCPPPDECIDPTGPRDEAAQYYNHYQGQAM---DAIDEDIAIISPRKFAEARKNFRRNHFDSSCGVVIRRNGN
        MSIQ  NDL +W+ RVVERRTV+DFDLNCPPPDECI+PTGPR+EAAQ++NH+Q QA    D +DEDIAIISPRKFAEARKNFRRNHFDSSCGV +R N N
Subjt:  MSIQSSNDLRDWSERVVERRTVLDFDLNCPPPDECIDPTGPRDEAAQYYNHYQGQAM---DAIDEDIAIISPRKFAEARKNFRRNHFDSSCGVVIRRNGN

Query:  TEVYGALSDVTSWPPFTIWSPRTINNNVSIQEQTLHNLDLRLSCESSSRATKATIDTDIPSALALSSS-IQPTDRTLRCAICIEPLVEETTTKCGHVFCR
        TEVYGALSDVTSWPPFTIW P TINNNVSI+EQT+HNLDL LS ESSSRA     DTDIPSALA SSS I P   +LRCAICIEPLVEETTTKCGHVFCR
Subjt:  TEVYGALSDVTSWPPFTIWSPRTINNNVSIQEQTLHNLDLRLSCESSSRATKATIDTDIPSALALSSS-IQPTDRTLRCAICIEPLVEETTTKCGHVFCR

Query:  NCIETAIATQHRCPICRRKLRKRDIIRIYLPFSS
        NCIETAIATQHRCPICRRKLRKRDIIRIYLPFSS
Subjt:  NCIETAIATQHRCPICRRKLRKRDIIRIYLPFSS

A0A6J1IW57 E3 ubiquitin-protein ligase complex slx8-rfp subunit slx8-like3.5e-10582.68Show/hide
Query:  MSIQSSNDLRDWSERVVERRTVLDFDLNCPPPDECIDPTGPRDEAAQYYNHYQGQAMDAIDEDIAIISPRKFAEARKNFRRNHFDSSCGVVIRRNGNTEV
        MSIQS+NDL +   RVVERRT LD DLNCPPPDECIDPTGP DEAAQY NH++ QA DA+DEDIAIISPRKFAEARKNFRRNHF+SS GVV+RRNG+TEV
Subjt:  MSIQSSNDLRDWSERVVERRTVLDFDLNCPPPDECIDPTGPRDEAAQYYNHYQGQAMDAIDEDIAIISPRKFAEARKNFRRNHFDSSCGVVIRRNGNTEV

Query:  YGALSDVTSWPPFTIWSPRTINNNVSIQE-QTLHNLDLRLSCESSSRATKATIDTDIPSALALSSSIQPTDRTLRCAICIEPLVEETTTKCGHVFCRNCI
        Y AL+DV+SWPPFTIWSPRT  N+VSIQE QT HNLDLRLSCE+SSRATK   D DIPSA ALSSS+ P DR LRCAICIEPLVEETTTKCGH+FCRNCI
Subjt:  YGALSDVTSWPPFTIWSPRTINNNVSIQE-QTLHNLDLRLSCESSSRATKATIDTDIPSALALSSSIQPTDRTLRCAICIEPLVEETTTKCGHVFCRNCI

Query:  ETAIATQHRCPICRRKLRKRDIIRIYLPFSS
        E AIATQH+CPICRRKLRKRDIIRIYLPFSS
Subjt:  ETAIATQHRCPICRRKLRKRDIIRIYLPFSS

SwissProt top hitse value%identityAlignment
P87176 E3 ubiquitin-protein ligase complex slx8-rfp subunit slx88.1e-0626.67Show/hide
Query:  PRTINNNVSIQEQTLHN-LDLRLSCESSSRATKATIDTDIPSALALSSSIQPTDRTL---RCAICIEPLVEETTTKCGHVFCRNCIETAIAT---QHRCP
        P TI++ + + ++T ++    +     +   T A I+ + PS       + P+ + L   +C IC++     + T CGH+FC  CI +A+ T     +CP
Subjt:  PRTINNNVSIQEQTLHN-LDLRLSCESSSRATKATIDTDIPSALALSSSIQPTDRTL---RCAICIEPLVEETTTKCGHVFCRNCIETAIAT---QHRCP

Query:  ICRRKLRKRDIIRIYLPFSS
        +CRRK+    +I + +   S
Subjt:  ICRRKLRKRDIIRIYLPFSS

Q1L5Z9 LON peptidase N-terminal domain and RING finger protein 26.8e-0542.31Show/hide
Query:  SIQPTDRTLRCAICIEPLVEETTTKCGHVFCRNCIETAIATQHRCPICRRKL
        S+  TD    CA+C+  L E  TT CGH FC  C+E  +     CP+C+ KL
Subjt:  SIQPTDRTLRCAICIEPLVEETTTKCGHVFCRNCIETAIATQHRCPICRRKL

Q2TBT8 RING finger protein 1515.2e-0533.33Show/hide
Query:  LSSSIQPTDRTLRCAICIEPLVEETTTKCGHVFCRNCIETAIATQHRCPICRRKLRKRDIIRI
        L+  I P D    C++C   L       C H+FC+ CI   +A Q  CP CR+++R R ++ +
Subjt:  LSSSIQPTDRTLRCAICIEPLVEETTTKCGHVFCRNCIETAIATQHRCPICRRKLRKRDIIRI

Q6LFN2 RING finger protein PFF0165c3.1e-0538.6Show/hide
Query:  RTLRCAICIEPLVEETTTKCGHVFCRNCIETAIATQHR-CPICRRKLRKRDIIRIYL
        R L C++C+E        KCGH++C NCI   + T++R CP C+    K+D+ +I+L
Subjt:  RTLRCAICIEPLVEETTTKCGHVFCRNCIETAIATQHR-CPICRRKLRKRDIIRIYL

Q9D9R0 E3 ubiquitin-protein ligase RNF1251.4e-0536Show/hide
Query:  SSRATKATIDTDIPSALALSSSIQPTDRTLRCAICIEPLVEETTTKCGHVFCRNCIETAIATQHR--CPICRRKL
        SS ++K+   +  P  L  S   +    +  C++C+E L +   T+CGHVFCR+CI T+I   ++  CP CR  L
Subjt:  SSRATKATIDTDIPSALALSSSIQPTDRTLRCAICIEPLVEETTTKCGHVFCRNCIETAIATQHR--CPICRRKL

Arabidopsis top hitse value%identityAlignment
AT3G07200.1 RING/U-box superfamily protein3.1e-1349.06Show/hide
Query:  CAICIEPLVEETTTKCGHVFCRNCIETAIATQHRCPICRRKLRKRDIIRIYLP
        C IC+ P  +E +TKCGH+FC+ CI+ A++ Q +CP CR+K+  +D+IR++LP
Subjt:  CAICIEPLVEETTTKCGHVFCRNCIETAIATQHRCPICRRKLRKRDIIRIYLP

AT3G07200.2 RING/U-box superfamily protein3.1e-1349.06Show/hide
Query:  CAICIEPLVEETTTKCGHVFCRNCIETAIATQHRCPICRRKLRKRDIIRIYLP
        C IC+ P  +E +TKCGH+FC+ CI+ A++ Q +CP CR+K+  +D+IR++LP
Subjt:  CAICIEPLVEETTTKCGHVFCRNCIETAIATQHRCPICRRKLRKRDIIRIYLP

AT5G48655.1 RING/U-box superfamily protein5.7e-1528.74Show/hide
Query:  MDAIDEDIAIISPRKFAEAR---KNFRRNHFDSSCGVVIRRNGNTEVYGALSDVTSWPPFTIWSPRTINNNVSIQEQTLHNLDLRLSCESSSRATKATID
        +DAI++D+   S   FAEA+   +N RR        +V   +G T  + A                    N+S + + + + +  + CE +S   +  + 
Subjt:  MDAIDEDIAIISPRKFAEAR---KNFRRNHFDSSCGVVIRRNGNTEVYGALSDVTSWPPFTIWSPRTINNNVSIQEQTLHNLDLRLSCESSSRATKATID

Query:  TDIPSALALSSSIQPTDRTLRCAICIEPLVEETTTKCGHVFCRNCIETAIATQHRCPICRRKLRKRDIIRIYLP
        + +  + A   +  P +    C IC+ P  EE +TKCGH+FC+ CI+ AI+ Q +CP CR+K+  +++IR++LP
Subjt:  TDIPSALALSSSIQPTDRTLRCAICIEPLVEETTTKCGHVFCRNCIETAIATQHRCPICRRKLRKRDIIRIYLP

AT5G48655.2 RING/U-box superfamily protein5.7e-1528.74Show/hide
Query:  MDAIDEDIAIISPRKFAEAR---KNFRRNHFDSSCGVVIRRNGNTEVYGALSDVTSWPPFTIWSPRTINNNVSIQEQTLHNLDLRLSCESSSRATKATID
        +DAI++D+   S   FAEA+   +N RR        +V   +G T  + A                    N+S + + + + +  + CE +S   +  + 
Subjt:  MDAIDEDIAIISPRKFAEAR---KNFRRNHFDSSCGVVIRRNGNTEVYGALSDVTSWPPFTIWSPRTINNNVSIQEQTLHNLDLRLSCESSSRATKATID

Query:  TDIPSALALSSSIQPTDRTLRCAICIEPLVEETTTKCGHVFCRNCIETAIATQHRCPICRRKLRKRDIIRIYLP
        + +  + A   +  P +    C IC+ P  EE +TKCGH+FC+ CI+ AI+ Q +CP CR+K+  +++IR++LP
Subjt:  TDIPSALALSSSIQPTDRTLRCAICIEPLVEETTTKCGHVFCRNCIETAIATQHRCPICRRKLRKRDIIRIYLP

AT5G48655.3 RING/U-box superfamily protein5.7e-1528.74Show/hide
Query:  MDAIDEDIAIISPRKFAEAR---KNFRRNHFDSSCGVVIRRNGNTEVYGALSDVTSWPPFTIWSPRTINNNVSIQEQTLHNLDLRLSCESSSRATKATID
        +DAI++D+   S   FAEA+   +N RR        +V   +G T  + A                    N+S + + + + +  + CE +S   +  + 
Subjt:  MDAIDEDIAIISPRKFAEAR---KNFRRNHFDSSCGVVIRRNGNTEVYGALSDVTSWPPFTIWSPRTINNNVSIQEQTLHNLDLRLSCESSSRATKATID

Query:  TDIPSALALSSSIQPTDRTLRCAICIEPLVEETTTKCGHVFCRNCIETAIATQHRCPICRRKLRKRDIIRIYLP
        + +  + A   +  P +    C IC+ P  EE +TKCGH+FC+ CI+ AI+ Q +CP CR+K+  +++IR++LP
Subjt:  TDIPSALALSSSIQPTDRTLRCAICIEPLVEETTTKCGHVFCRNCIETAIATQHRCPICRRKLRKRDIIRIYLP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGCCAAGATTGCTTTTATATCGATTGCCGCCCCCTCTTTCTCTTCCCCTTTCTCCCTTTTTTTCCCCTCATTTCTTCTTCCTCCGCTTCCTCTCTGCAAATTTCT
TGCGTTTCCTCTTTCGATCGCTCTCCTCAACCCGCAGTTCGCCGTTTCGTTTTCCATCAGATTCAAGGAGCTGATTCGTGGAATAACAGAAAGGGCTGCCGGAATGAGCA
TCCAAAGTTCAAATGATCTACGTGATTGGAGTGAAAGAGTTGTTGAGAGAAGAACAGTATTGGACTTTGACTTAAATTGTCCACCCCCAGATGAGTGCATTGATCCAACT
GGCCCTCGTGACGAAGCAGCACAGTACTATAATCATTACCAAGGACAGGCTATGGACGCTATCGATGAGGACATTGCTATAATCTCCCCTAGGAAGTTTGCTGAAGCCAG
GAAGAATTTTCGAAGAAACCACTTTGACAGTAGCTGTGGTGTAGTCATCAGACGTAATGGCAACACAGAAGTTTATGGTGCTCTCTCAGATGTAACAAGTTGGCCCCCTT
TTACAATTTGGTCACCTCGTACAATAAACAATAATGTATCCATACAGGAACAAACACTTCACAACTTGGACCTTCGCCTAAGCTGTGAAAGCAGTAGTAGGGCCACTAAG
GCGACAATTGACACTGACATTCCTTCTGCACTTGCACTAAGTAGTAGCATCCAACCTACGGATCGGACTTTGCGGTGTGCGATCTGCATAGAACCACTGGTTGAAGAAAC
GACAACAAAATGTGGGCACGTTTTCTGCAGGAATTGCATCGAAACGGCCATAGCTACCCAGCATAGATGTCCCATATGTCGGCGTAAGCTTAGAAAACGAGATATTATCC
GGATTTACCTTCCTTTTTCAAGTTAA
mRNA sequenceShow/hide mRNA sequence
TGAGGAGAGCCCACGGCGGGGAAGAGCGGGGAAGAATAAGGGAAGCGCCGAAGAGGACAAAGAGCAACGAAGATGGCAAATAAAGAATAATTTCGAGGAAAGGAGGATCG
GAAGGATGTAAAGTTTTTCAAAGAAAACACCTCTACATATATGGAATGGAAGCCAAGATTGCTTTTATATCGATTGCCGCCCCCTCTTTCTCTTCCCCTTTCTCCCTTTT
TTTCCCCTCATTTCTTCTTCCTCCGCTTCCTCTCTGCAAATTTCTTGCGTTTCCTCTTTCGATCGCTCTCCTCAACCCGCAGTTCGCCGTTTCGTTTTCCATCAGATTCA
AGGAGCTGATTCGTGGAATAACAGAAAGGGCTGCCGGAATGAGCATCCAAAGTTCAAATGATCTACGTGATTGGAGTGAAAGAGTTGTTGAGAGAAGAACAGTATTGGAC
TTTGACTTAAATTGTCCACCCCCAGATGAGTGCATTGATCCAACTGGCCCTCGTGACGAAGCAGCACAGTACTATAATCATTACCAAGGACAGGCTATGGACGCTATCGA
TGAGGACATTGCTATAATCTCCCCTAGGAAGTTTGCTGAAGCCAGGAAGAATTTTCGAAGAAACCACTTTGACAGTAGCTGTGGTGTAGTCATCAGACGTAATGGCAACA
CAGAAGTTTATGGTGCTCTCTCAGATGTAACAAGTTGGCCCCCTTTTACAATTTGGTCACCTCGTACAATAAACAATAATGTATCCATACAGGAACAAACACTTCACAAC
TTGGACCTTCGCCTAAGCTGTGAAAGCAGTAGTAGGGCCACTAAGGCGACAATTGACACTGACATTCCTTCTGCACTTGCACTAAGTAGTAGCATCCAACCTACGGATCG
GACTTTGCGGTGTGCGATCTGCATAGAACCACTGGTTGAAGAAACGACAACAAAATGTGGGCACGTTTTCTGCAGGAATTGCATCGAAACGGCCATAGCTACCCAGCATA
GATGTCCCATATGTCGGCGTAAGCTTAGAAAACGAGATATTATCCGGATTTACCTTCCTTTTTCAAGTTAAAAACAAAAAATGGATACAACACAAGAATATTGTATTCTT
TTTCTGATGATTATGACGACCATTAGGTTTGTACTTGCACACAGTTGCATTAACAAATATAGATTTCTTGATTTCTTCTTCTTCTTCTTCTTCTTCATTTGTATTGAATG
AAACTATATAAACAAAAACTAAAATCTCTTTGATATGAGGTGTTTGTATTTGACTGAAAAGACAGGCGGTTGATTCATTAAAAATAGTTTATTGATCGGTGAATTAATTA
GAAGAGGGAATGAACTGTATGGCTTTTGAACA
Protein sequenceShow/hide protein sequence
MEAKIAFISIAAPSFSSPFSLFFPSFLLPPLPLCKFLAFPLSIALLNPQFAVSFSIRFKELIRGITERAAGMSIQSSNDLRDWSERVVERRTVLDFDLNCPPPDECIDPT
GPRDEAAQYYNHYQGQAMDAIDEDIAIISPRKFAEARKNFRRNHFDSSCGVVIRRNGNTEVYGALSDVTSWPPFTIWSPRTINNNVSIQEQTLHNLDLRLSCESSSRATK
ATIDTDIPSALALSSSIQPTDRTLRCAICIEPLVEETTTKCGHVFCRNCIETAIATQHRCPICRRKLRKRDIIRIYLPFSS