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CaUC05G083680 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC05G083680
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionUnknown protein
Genome locationCiama_Chr05:4129854..4130232
RNA-Seq ExpressionCaUC05G083680
SyntenyCaUC05G083680
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7018792.1 Pre-mRNA-splicing factor SLU7 [Cucurbita argyrosperma subsp. argyrosperma]4.8e-1065.52Show/hide
Query:  NCVRRHVVHVTDNPLHDRRYFFSGPYNRSPSQKLLWFFVWVPQKIQERHIARNSIEIH
        N VRRHVVH TDNPL +  +FF GPY RSPSQKLL FFV +PQKIQE +    + EIH
Subjt:  NCVRRHVVHVTDNPLHDRRYFFSGPYNRSPSQKLLWFFVWVPQKIQERHIARNSIEIH
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCCTTCTTAAAATTTCATCGGCCCAACTCATAGGAGTTCCTTTGAACAGCCCATTACCGTCAACGGGATCTCAAAAATGGTCAAGGAAGAAGATTAACTGCGTAAG
ACGACATGTCGTTCACGTGACTGATAATCCACTTCATGATCGACGATATTTTTTTTCGGGCCCCTACAATCGGTCTCCGTCACAGAAGCTTCTTTGGTTTTTCGTATGGG
TTCCTCAGAAAATCCAGGAACGACATATCGCACGAAACTCCATTGAAATTCATTTCTCAGAAACAGGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGCCTTCTTAAAATTTCATCGGCCCAACTCATAGGAGTTCCTTTGAACAGCCCATTACCGTCAACGGGATCTCAAAAATGGTCAAGGAAGAAGATTAACTGCGTAAG
ACGACATGTCGTTCACGTGACTGATAATCCACTTCATGATCGACGATATTTTTTTTCGGGCCCCTACAATCGGTCTCCGTCACAGAAGCTTCTTTGGTTTTTCGTATGGG
TTCCTCAGAAAATCCAGGAACGACATATCGCACGAAACTCCATTGAAATTCATTTCTCAGAAACAGGGTAG
Protein sequenceShow/hide protein sequence
MGLLKISSAQLIGVPLNSPLPSTGSQKWSRKKINCVRRHVVHVTDNPLHDRRYFFSGPYNRSPSQKLLWFFVWVPQKIQERHIARNSIEIHFSETG