CuGenDBv2

Gene ID	CaUC05G086000
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	nucleolar protein 58
Genome location	Ciama_Chr05:6161386..6162385
RNA-Seq Expression	CaUC05G086000
Synteny	CaUC05G086000
Gene Ontology terms	NA
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004134201.1 uncharacterized protein LOC101221899 isoform X2 [Cucumis sativus]

4.1e-58

73.94

Show/hide

Query:  MEDLTEEERRALRGSKFAPLPSQSTSSRSQPRLAHPGGPLKTNKAAALAKFLERKLHQDPNALSSINPQILDLAVRNAKASVLSSGTSGSGTTIRHVDTF
        MEDLTEEERRALRGSKFAPLPSQSTSSRS PRLAHPGGPLKTNKAAALAKFL RKL+QDPNALSSINPQILDLAVRNAKASV SSGT+     IRHVDTF
Subjt:  MEDLTEEERRALRGSKFAPLPSQSTSSRSQPRLAHPGGPLKTNKAAALAKFLERKLHQDPNALSSINPQILDLAVRNAKASVLSSGTSGSGTTIRHVDTF

Query:  DDPEVSFDEGEAMNSEPRKQKKKNKK---KNKKNKRQKVGIPSWFCFKLYSLSVASIFPRNKSVVTVLQIVDDSECGVGKKPKKKLRL
        DDPE SFDEGE+MNSEP+KQKKKNKK   KNKKNKRQK                               IV+DSECGVG KPKKKLRL
Subjt:  DDPEVSFDEGEAMNSEPRKQKKKNKK---KNKKNKRQKVGIPSWFCFKLYSLSVASIFPRNKSVVTVLQIVDDSECGVGKKPKKKLRL

XP_022956118.1 uncharacterized protein LOC111457905 isoform X1 [Cucurbita moschata]

5.9e-57

72.43

Show/hide

Query:  MEDLTEEERRALRGSKFAPLPSQSTSSRSQPRLAHPGGPLKTNKAAALAKFLERKLHQDPNALSSINPQILDLAVRNAKASVLSSGTSGSGTTIRHVDTF
        MEDL+EEERRALRGSKFAPLPSQ TSSRS PRLAHPGGPLKTNKAAALAKFL+RKLHQDPN LSSINPQIL+LAVRNAKASVLSS    SGT IRHVDTF
Subjt:  MEDLTEEERRALRGSKFAPLPSQSTSSRSQPRLAHPGGPLKTNKAAALAKFLERKLHQDPNALSSINPQILDLAVRNAKASVLSSGTSGSGTTIRHVDTF

Query:  DDPEVSFDEGEAMNSEPRKQKKKNKKKNKKNKRQKVGIPSWFCFKLYSLSVASIFPRNKSVVTVLQIVDDSECGVGKKPKKKLRL
        DDPE SFD+GEAMNSEP+KQK KN KKNKKNK +K                     +NK      +IV+DS CGVGK+PKKKL+L
Subjt:  DDPEVSFDEGEAMNSEPRKQKKKNKKKNKKNKRQKVGIPSWFCFKLYSLSVASIFPRNKSVVTVLQIVDDSECGVGKKPKKKLRL

XP_022956119.1 uncharacterized protein LOC111457905 isoform X2 [Cucurbita moschata]

4.5e-57

72.43

Show/hide

Query:  MEDLTEEERRALRGSKFAPLPSQSTSSRSQPRLAHPGGPLKTNKAAALAKFLERKLHQDPNALSSINPQILDLAVRNAKASVLSSGTSGSGTTIRHVDTF
        MEDL+EEERRALRGSKFAPLPSQ TSSRS PRLAHPGGPLKTNKAAALAKFL+RKLHQDPN LSSINPQIL+LAVRNAKASVLSS    SGT IRHVDTF
Subjt:  MEDLTEEERRALRGSKFAPLPSQSTSSRSQPRLAHPGGPLKTNKAAALAKFLERKLHQDPNALSSINPQILDLAVRNAKASVLSSGTSGSGTTIRHVDTF

Query:  DDPEVSFDEGEAMNSEPRKQKKKNKKKNKKNKRQKVGIPSWFCFKLYSLSVASIFPRNKSVVTVLQIVDDSECGVGKKPKKKLRL
        DDPE SFD+GEAMNSEP+KQK KN KKNKKNK +K                     +NK      +IV+DS CGVGK+PKKKL+L
Subjt:  DDPEVSFDEGEAMNSEPRKQKKKNKKKNKKNKRQKVGIPSWFCFKLYSLSVASIFPRNKSVVTVLQIVDDSECGVGKKPKKKLRL

XP_031739377.1 uncharacterized protein LOC101221899 isoform X1 [Cucumis sativus]

2.7e-57

74.59

Show/hide

Query:  MEDLTEEERRALRGSKFAPLPSQSTSSRSQPRLAHPGGPLKTNKAAALAKFLERKLHQDPNALSSINPQILDLAVRNAKASVLSSGTSGSGTTIRHVDTF
        MEDLTEEERRALRGSKFAPLPSQSTSSRS PRLAHPGGPLKTNKAAALAKFL RKL+QDPNALSSINPQILDLAVRNAKASV SSGT+     IRHVDTF
Subjt:  MEDLTEEERRALRGSKFAPLPSQSTSSRSQPRLAHPGGPLKTNKAAALAKFLERKLHQDPNALSSINPQILDLAVRNAKASVLSSGTSGSGTTIRHVDTF

Query:  DDPEVSFDEGEAMNSEPRKQKKKNKK---KNKKNKRQKVGIPSWFCFKLYSL-SVASIFPRNKSVVTVLQIVDDSECGVGKKPKK
        DDPE SFDEGE+MNSEP+KQKKKNKK   KNKKNKRQKV IP      LY+L SVASIFP  +  +   +++      +G+ PK+
Subjt:  DDPEVSFDEGEAMNSEPRKQKKKNKK---KNKKNKRQKVGIPSWFCFKLYSL-SVASIFPRNKSVVTVLQIVDDSECGVGKKPKK

XP_038890855.1 uncharacterized protein LOC120080295 [Benincasa hispida]

4.7e-62

76.34

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Query:  MEDLTEEERRALRGSKFAPLPSQSTSSRSQPRLAHPGGPLKTNKAAALAKFLERKLHQDPNALSSINPQILDLAVRNAKASVLSSGTSGSGTTIRHVDTF
        MEDLTEEERRALRGSKFAPLPSQSTSSRSQPRLAHPGGPLKTNKAAALAKFL+RKLHQDPNALSSI+PQILDLAVRNAKASVLS G+SGSGT IRHVDTF
Subjt:  MEDLTEEERRALRGSKFAPLPSQSTSSRSQPRLAHPGGPLKTNKAAALAKFLERKLHQDPNALSSINPQILDLAVRNAKASVLSSGTSGSGTTIRHVDTF

Query:  DDPEVSFDEGEAMNSEPRKQ-KKKNKKKNKKNKRQKVGIPSWFCFKLYSLSVASIFPRNKSVVTVLQIVDDSECGVGKKPKKKLRL
        DDPE S D+GEAMNSEPR+Q KKK KKKNKKNKRQK                               IV+DS CGVGKKPKKKLRL
Subjt:  DDPEVSFDEGEAMNSEPRKQ-KKKNKKKNKKNKRQKVGIPSWFCFKLYSLSVASIFPRNKSVVTVLQIVDDSECGVGKKPKKKLRL

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LAK0 Uncharacterized protein

2.0e-58

73.94

Show/hide

Query:  MEDLTEEERRALRGSKFAPLPSQSTSSRSQPRLAHPGGPLKTNKAAALAKFLERKLHQDPNALSSINPQILDLAVRNAKASVLSSGTSGSGTTIRHVDTF
        MEDLTEEERRALRGSKFAPLPSQSTSSRS PRLAHPGGPLKTNKAAALAKFL RKL+QDPNALSSINPQILDLAVRNAKASV SSGT+     IRHVDTF
Subjt:  MEDLTEEERRALRGSKFAPLPSQSTSSRSQPRLAHPGGPLKTNKAAALAKFLERKLHQDPNALSSINPQILDLAVRNAKASVLSSGTSGSGTTIRHVDTF

Query:  DDPEVSFDEGEAMNSEPRKQKKKNKK---KNKKNKRQKVGIPSWFCFKLYSLSVASIFPRNKSVVTVLQIVDDSECGVGKKPKKKLRL
        DDPE SFDEGE+MNSEP+KQKKKNKK   KNKKNKRQK                               IV+DSECGVG KPKKKLRL
Subjt:  DDPEVSFDEGEAMNSEPRKQKKKNKK---KNKKNKRQKVGIPSWFCFKLYSLSVASIFPRNKSVVTVLQIVDDSECGVGKKPKKKLRL

A0A1S3AY37 uncharacterized protein LOC103483832

3.2e-56

72.43

Show/hide

Query:  MEDLTEEERRALRGSKFAPLPSQSTSSRSQPRLAHPGGPLKTNKAAALAKFLERKLHQDPNALSSINPQILDLAVRNAKASVLSSGTSGSGTTIRHVDTF
        MEDLTEEERRALRGSKFAPLPSQSTSSRS PRLAHPGGPLKTNKAAALAKFL RKLHQDPNA SSINPQILDLAVRNAKASV SSGT+     IRHVDTF
Subjt:  MEDLTEEERRALRGSKFAPLPSQSTSSRSQPRLAHPGGPLKTNKAAALAKFLERKLHQDPNALSSINPQILDLAVRNAKASVLSSGTSGSGTTIRHVDTF

Query:  DDPEVSFDEGEAMNSEPRKQKKKNKK---KNKKNKRQKVGIPSWFCFKLYSLSVASIFPRNKSVVTVLQIVDDSECGVGKKPKKK
        DDPE SFDEGE+MNSEP+KQKKKNKK   KNKKNKRQK                               IV+DSECGVGK P  K
Subjt:  DDPEVSFDEGEAMNSEPRKQKKKNKK---KNKKNKRQKVGIPSWFCFKLYSLSVASIFPRNKSVVTVLQIVDDSECGVGKKPKKK

A0A6J1GVW4 uncharacterized protein LOC111457905 isoform X1

2.9e-57

72.43

Show/hide

Query:  MEDLTEEERRALRGSKFAPLPSQSTSSRSQPRLAHPGGPLKTNKAAALAKFLERKLHQDPNALSSINPQILDLAVRNAKASVLSSGTSGSGTTIRHVDTF
        MEDL+EEERRALRGSKFAPLPSQ TSSRS PRLAHPGGPLKTNKAAALAKFL+RKLHQDPN LSSINPQIL+LAVRNAKASVLSS    SGT IRHVDTF
Subjt:  MEDLTEEERRALRGSKFAPLPSQSTSSRSQPRLAHPGGPLKTNKAAALAKFLERKLHQDPNALSSINPQILDLAVRNAKASVLSSGTSGSGTTIRHVDTF

Query:  DDPEVSFDEGEAMNSEPRKQKKKNKKKNKKNKRQKVGIPSWFCFKLYSLSVASIFPRNKSVVTVLQIVDDSECGVGKKPKKKLRL
        DDPE SFD+GEAMNSEP+KQK KN KKNKKNK +K                     +NK      +IV+DS CGVGK+PKKKL+L
Subjt:  DDPEVSFDEGEAMNSEPRKQKKKNKKKNKKNKRQKVGIPSWFCFKLYSLSVASIFPRNKSVVTVLQIVDDSECGVGKKPKKKLRL

A0A6J1GY51 uncharacterized protein LOC111457905 isoform X2

2.2e-57

72.43

Show/hide

Query:  MEDLTEEERRALRGSKFAPLPSQSTSSRSQPRLAHPGGPLKTNKAAALAKFLERKLHQDPNALSSINPQILDLAVRNAKASVLSSGTSGSGTTIRHVDTF
        MEDL+EEERRALRGSKFAPLPSQ TSSRS PRLAHPGGPLKTNKAAALAKFL+RKLHQDPN LSSINPQIL+LAVRNAKASVLSS    SGT IRHVDTF
Subjt:  MEDLTEEERRALRGSKFAPLPSQSTSSRSQPRLAHPGGPLKTNKAAALAKFLERKLHQDPNALSSINPQILDLAVRNAKASVLSSGTSGSGTTIRHVDTF

Query:  DDPEVSFDEGEAMNSEPRKQKKKNKKKNKKNKRQKVGIPSWFCFKLYSLSVASIFPRNKSVVTVLQIVDDSECGVGKKPKKKLRL
        DDPE SFD+GEAMNSEP+KQK KN KKNKKNK +K                     +NK      +IV+DS CGVGK+PKKKL+L
Subjt:  DDPEVSFDEGEAMNSEPRKQKKKNKKKNKKNKRQKVGIPSWFCFKLYSLSVASIFPRNKSVVTVLQIVDDSECGVGKKPKKKLRL

A0A6J1IUT6 uncharacterized protein LOC111479494

3.8e-57

72.43

Show/hide

Query:  MEDLTEEERRALRGSKFAPLPSQSTSSRSQPRLAHPGGPLKTNKAAALAKFLERKLHQDPNALSSINPQILDLAVRNAKASVLSSGTSGSGTTIRHVDTF
        MEDL+EEERRALRGSKFAPLPSQ TSSRS PRLAHPGGPLKTNKAAALAKFL+RKLHQDPN LSSINPQIL+LAVRNAKASVLSS    SGT IRHVDTF
Subjt:  MEDLTEEERRALRGSKFAPLPSQSTSSRSQPRLAHPGGPLKTNKAAALAKFLERKLHQDPNALSSINPQILDLAVRNAKASVLSSGTSGSGTTIRHVDTF

Query:  DDPEVSFDEGEAMNSEPRKQKKKNKKKNKKNKRQKVGIPSWFCFKLYSLSVASIFPRNKSVVTVLQIVDDSECGVGKKPKKKLRL
        DDPE SFD+GEAMNSEP+KQK KN KKNKKNK+ K                     +NK      +IV+DS CGVGK+PKKKL+L
Subjt:  DDPEVSFDEGEAMNSEPRKQKKKNKKKNKKNKRQKVGIPSWFCFKLYSLSVASIFPRNKSVVTVLQIVDDSECGVGKKPKKKLRL

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G18540.1 unknown protein

1.2e-36

64.71

Show/hide

Query:  EDLTEEERRALRGSKFAPLPSQSTSSRSQ-PRLAHPGGPLKTNKAAALAKFLERKLHQDPNALSSINPQILDLAVRNAKASVLSSGTSGSGTTIRHVDTF
        E+LTE+E+RALRGSKFAPL S  +SSRS+ PRLAHPGGPLKTNKAAALAKFLERKL QDPN L+SI+P +++LAV+NAK +V+SSG S SG  I+HV +F
Subjt:  EDLTEEERRALRGSKFAPLPSQSTSSRSQ-PRLAHPGGPLKTNKAAALAKFLERKLHQDPNALSSINPQILDLAVRNAKASVLSSGTSGSGTTIRHVDTF

Query:  DDPEVSFDEGEAMNSE-PRKQKKKNKKKNKKNKRQK
        +D EVS D+ +  N++  +K+KKKN KK K+ K++K
Subjt:  DDPEVSFDEGEAMNSE-PRKQKKKNKKKNKKNKRQK

AT5G18540.2 unknown protein

1.2e-36

64.71

Show/hide

Query:  EDLTEEERRALRGSKFAPLPSQSTSSRSQ-PRLAHPGGPLKTNKAAALAKFLERKLHQDPNALSSINPQILDLAVRNAKASVLSSGTSGSGTTIRHVDTF
        E+LTE+E+RALRGSKFAPL S  +SSRS+ PRLAHPGGPLKTNKAAALAKFLERKL QDPN L+SI+P +++LAV+NAK +V+SSG S SG  I+HV +F
Subjt:  EDLTEEERRALRGSKFAPLPSQSTSSRSQ-PRLAHPGGPLKTNKAAALAKFLERKLHQDPNALSSINPQILDLAVRNAKASVLSSGTSGSGTTIRHVDTF

Query:  DDPEVSFDEGEAMNSE-PRKQKKKNKKKNKKNKRQK
        +D EVS D+ +  N++  +K+KKKN KK K+ K++K
Subjt:  DDPEVSFDEGEAMNSE-PRKQKKKNKKKNKKNKRQK

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGAGGATCTTACCGAAGAAGAAAGACGTGCTTTACGGGGAAGCAAATTTGCGCCTCTCCCATCCCAATCCACTTCCTCTCGATCTCAACCAAGGTTGGCTCATCCAGG
TGGACCATTGAAGACCAACAAAGCGGCGGCTCTCGCCAAATTTCTCGAAAGGAAATTGCACCAAGATCCTAATGCTTTGTCTTCTATCAATCCCCAGATTTTGGACCTCG
CTGTTCGGAATGCCAAAGCCTCTGTTCTATCCAGTGGCACGTCAGGTTCTGGCACAACTATTCGCCACGTGGATACATTCGATGATCCTGAGGTCTCTTTTGACGAAGGG
GAAGCCATGAATTCTGAGCCTAGAAAGCAAAAGAAGAAGAACAAGAAGAAAAATAAGAAGAATAAAAGGCAAAAGGTTGGAATCCCTTCATGGTTTTGTTTCAAGCTCTA
TAGTCTTAGTGTTGCCTCTATATTTCCTCGTAATAAATCTGTTGTGACTGTACTGCAGATTGTTGATGACTCGGAGTGTGGCGTTGGGAAAAAACCTAAAAAGAAGTTGA
GATTGTGA

mRNA sequence

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Protein sequence

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MEDLTEEERRALRGSKFAPLPSQSTSSRSQPRLAHPGGPLKTNKAAALAKFLERKLHQDPNALSSINPQILDLAVRNAKASVLSSGTSGSGTTIRHVDTFDDPEVSFDEG
EAMNSEPRKQKKKNKKKNKKNKRQKVGIPSWFCFKLYSLSVASIFPRNKSVVTVLQIVDDSECGVGKKPKKKLRL

CaUC05G086000 (gene) of Watermelon (USVL246-FR2) v1 genome