; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CaUC05G087200 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC05G087200
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
Descriptionchromatin structure-remodeling complex protein BSH
Genome locationCiama_Chr05:7347505..7352757
RNA-Seq ExpressionCaUC05G087200
SyntenyCaUC05G087200
Gene Ontology termsGO:0006338 - chromatin remodeling (biological process)
GO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0000228 - nuclear chromosome (cellular component)
GO:0070603 - SWI/SNF superfamily-type complex (cellular component)
GO:0003712 - transcription coregulator activity (molecular function)
InterPro domainsIPR006939 - SNF5/SMARCB1/INI1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004147636.1 chromatin structure-remodeling complex protein BSH [Cucumis sativus]5.7e-12794.05Show/hide
Query:  MKSSASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIP
        MK+SASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIP
Subjt:  MKSSASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIP

Query:  IKLEPNNAILFLSQLDLRVNNTLIKDQFLWDLNNYESDPEEFSRTLCKDLGIEDPEVGPAIAFAIREQLYEIAVQNVASARESRMSKKGRRGFEHVPVSK
        IK            LDLRVNNTLIKDQFLWDLNNYESDPEEFSRTLCKDLGI+DPEVGPAIA AIREQLYEIAVQNVASARESRMSKKGRRGFEHVPVSK
Subjt:  IKLEPNNAILFLSQLDLRVNNTLIKDQFLWDLNNYESDPEEFSRTLCKDLGIEDPEVGPAIAFAIREQLYEIAVQNVASARESRMSKKGRRGFEHVPVSK

Query:  TGGASVDLVKLFGHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR
        TGGASVDLVKLFGHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR
Subjt:  TGGASVDLVKLFGHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR

XP_008439008.1 PREDICTED: chromatin structure-remodeling complex protein BSH isoform X1 [Cucumis melo]4.8e-12693.25Show/hide
Query:  MKSSASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIP
        MK+SASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIP
Subjt:  MKSSASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIP

Query:  IKLEPNNAILFLSQLDLRVNNTLIKDQFLWDLNNYESDPEEFSRTLCKDLGIEDPEVGPAIAFAIREQLYEIAVQNVASARESRMSKKGRRGFEHVPVSK
        IK            LDLRVNNT+IKDQFLWDLNNYESDPEEFSRTLCKDLGI+DPEVGPAIA AIREQLYEIAVQNVASARESRMSKKGRRGFEHVPVSK
Subjt:  IKLEPNNAILFLSQLDLRVNNTLIKDQFLWDLNNYESDPEEFSRTLCKDLGIEDPEVGPAIAFAIREQLYEIAVQNVASARESRMSKKGRRGFEHVPVSK

Query:  TGGASVDLVKLFGHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR
        TGGASVDLVKLFGHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEER AR
Subjt:  TGGASVDLVKLFGHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR

XP_022138105.1 chromatin structure-remodeling complex protein BSH isoform X1 [Momordica charantia]8.5e-12390.87Show/hide
Query:  MKSSASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIP
        MK+SAS HSK PFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAF+TQIAQSIQSQLTEFRSFEGQDMYTGEKIIP
Subjt:  MKSSASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIP

Query:  IKLEPNNAILFLSQLDLRVNNTLIKDQFLWDLNNYESDPEEFSRTLCKDLGIEDPEVGPAIAFAIREQLYEIAVQNVASARESRMSKKGRRGFEHVPVSK
        IK            LDLRVNNTLIKDQFLWDLNNYESDPEEFSRTLCKDLGIEDPEVGPA+A AIREQLYEIA+QNVASARESRMSKKGRRGFEHVP SK
Subjt:  IKLEPNNAILFLSQLDLRVNNTLIKDQFLWDLNNYESDPEEFSRTLCKDLGIEDPEVGPAIAFAIREQLYEIAVQNVASARESRMSKKGRRGFEHVPVSK

Query:  TGGASVDLVKLFGHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR
         GGASVDLVKLFG RSSVVRKRKDWD+YEPIVDLLSNEEVDALEAKEERTAR
Subjt:  TGGASVDLVKLFGHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR

XP_023538812.1 chromatin structure-remodeling complex protein BSH [Cucurbita pepo subsp. pepo]2.3e-12089.68Show/hide
Query:  MKSSASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIP
        MKSSAS +SK+PFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNP+DPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKII 
Subjt:  MKSSASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIP

Query:  IKLEPNNAILFLSQLDLRVNNTLIKDQFLWDLNNYESDPEEFSRTLCKDLGIEDPEVGPAIAFAIREQLYEIAVQNVASARESRMSKKGRRGFEHVPVSK
        IK            LDLRVNNTLI+DQFLWDLNNYESDPEEFSRT CKDLGIEDPEVGPAIA AIREQLYEIAVQNVASARESR+SKKGRRGFEHV  SK
Subjt:  IKLEPNNAILFLSQLDLRVNNTLIKDQFLWDLNNYESDPEEFSRTLCKDLGIEDPEVGPAIAFAIREQLYEIAVQNVASARESRMSKKGRRGFEHVPVSK

Query:  TGGASVDLVKLFGHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR
        TGGASVDL+KLFGHRSS VRKRKDWDIYEPIVDLLSNEEVDALEAKEER AR
Subjt:  TGGASVDLVKLFGHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR

XP_038898737.1 chromatin structure-remodeling complex protein BSH [Benincasa hispida]2.8e-12693.25Show/hide
Query:  MKSSASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIP
        MK+SASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVV+FAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMY+GEKIIP
Subjt:  MKSSASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIP

Query:  IKLEPNNAILFLSQLDLRVNNTLIKDQFLWDLNNYESDPEEFSRTLCKDLGIEDPEVGPAIAFAIREQLYEIAVQNVASARESRMSKKGRRGFEHVPVSK
        IK            LDLRVNNTLIKDQFLWDLNNYESDPEEFSRT CKDLGIEDPEVGPAIA AIREQLYEIAVQNVASARESRMSKKGRRGFEHVPVSK
Subjt:  IKLEPNNAILFLSQLDLRVNNTLIKDQFLWDLNNYESDPEEFSRTLCKDLGIEDPEVGPAIAFAIREQLYEIAVQNVASARESRMSKKGRRGFEHVPVSK

Query:  TGGASVDLVKLFGHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR
        TGGASVDLVKLFGHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR
Subjt:  TGGASVDLVKLFGHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR

TrEMBL top hitse value%identityAlignment
A0A0A0L868 Uncharacterized protein2.7e-12794.05Show/hide
Query:  MKSSASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIP
        MK+SASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIP
Subjt:  MKSSASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIP

Query:  IKLEPNNAILFLSQLDLRVNNTLIKDQFLWDLNNYESDPEEFSRTLCKDLGIEDPEVGPAIAFAIREQLYEIAVQNVASARESRMSKKGRRGFEHVPVSK
        IK            LDLRVNNTLIKDQFLWDLNNYESDPEEFSRTLCKDLGI+DPEVGPAIA AIREQLYEIAVQNVASARESRMSKKGRRGFEHVPVSK
Subjt:  IKLEPNNAILFLSQLDLRVNNTLIKDQFLWDLNNYESDPEEFSRTLCKDLGIEDPEVGPAIAFAIREQLYEIAVQNVASARESRMSKKGRRGFEHVPVSK

Query:  TGGASVDLVKLFGHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR
        TGGASVDLVKLFGHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR
Subjt:  TGGASVDLVKLFGHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR

A0A1S3AXP6 chromatin structure-remodeling complex protein BSH isoform X12.3e-12693.25Show/hide
Query:  MKSSASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIP
        MK+SASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIP
Subjt:  MKSSASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIP

Query:  IKLEPNNAILFLSQLDLRVNNTLIKDQFLWDLNNYESDPEEFSRTLCKDLGIEDPEVGPAIAFAIREQLYEIAVQNVASARESRMSKKGRRGFEHVPVSK
        IK            LDLRVNNT+IKDQFLWDLNNYESDPEEFSRTLCKDLGI+DPEVGPAIA AIREQLYEIAVQNVASARESRMSKKGRRGFEHVPVSK
Subjt:  IKLEPNNAILFLSQLDLRVNNTLIKDQFLWDLNNYESDPEEFSRTLCKDLGIEDPEVGPAIAFAIREQLYEIAVQNVASARESRMSKKGRRGFEHVPVSK

Query:  TGGASVDLVKLFGHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR
        TGGASVDLVKLFGHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEER AR
Subjt:  TGGASVDLVKLFGHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR

A0A5A7UEL5 Chromatin structure-remodeling complex protein BSH isoform X12.3e-12693.25Show/hide
Query:  MKSSASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIP
        MK+SASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIP
Subjt:  MKSSASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIP

Query:  IKLEPNNAILFLSQLDLRVNNTLIKDQFLWDLNNYESDPEEFSRTLCKDLGIEDPEVGPAIAFAIREQLYEIAVQNVASARESRMSKKGRRGFEHVPVSK
        IK            LDLRVNNT+IKDQFLWDLNNYESDPEEFSRTLCKDLGI+DPEVGPAIA AIREQLYEIAVQNVASARESRMSKKGRRGFEHVPVSK
Subjt:  IKLEPNNAILFLSQLDLRVNNTLIKDQFLWDLNNYESDPEEFSRTLCKDLGIEDPEVGPAIAFAIREQLYEIAVQNVASARESRMSKKGRRGFEHVPVSK

Query:  TGGASVDLVKLFGHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR
        TGGASVDLVKLFGHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEER AR
Subjt:  TGGASVDLVKLFGHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR

A0A6J1C8H9 chromatin structure-remodeling complex protein BSH isoform X14.1e-12390.87Show/hide
Query:  MKSSASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIP
        MK+SAS HSK PFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAF+TQIAQSIQSQLTEFRSFEGQDMYTGEKIIP
Subjt:  MKSSASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIP

Query:  IKLEPNNAILFLSQLDLRVNNTLIKDQFLWDLNNYESDPEEFSRTLCKDLGIEDPEVGPAIAFAIREQLYEIAVQNVASARESRMSKKGRRGFEHVPVSK
        IK            LDLRVNNTLIKDQFLWDLNNYESDPEEFSRTLCKDLGIEDPEVGPA+A AIREQLYEIA+QNVASARESRMSKKGRRGFEHVP SK
Subjt:  IKLEPNNAILFLSQLDLRVNNTLIKDQFLWDLNNYESDPEEFSRTLCKDLGIEDPEVGPAIAFAIREQLYEIAVQNVASARESRMSKKGRRGFEHVPVSK

Query:  TGGASVDLVKLFGHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR
         GGASVDLVKLFG RSSVVRKRKDWD+YEPIVDLLSNEEVDALEAKEERTAR
Subjt:  TGGASVDLVKLFGHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR

A0A6J1FBE7 chromatin structure-remodeling complex protein BSH2.5e-12089.29Show/hide
Query:  MKSSASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIP
        MKSSAS +SK+PFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNP+DPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKII 
Subjt:  MKSSASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIP

Query:  IKLEPNNAILFLSQLDLRVNNTLIKDQFLWDLNNYESDPEEFSRTLCKDLGIEDPEVGPAIAFAIREQLYEIAVQNVASARESRMSKKGRRGFEHVPVSK
        IK            LDLRVNNTLI+DQFLWDLNNYESDPEEFSRT CKDLGIEDPEVGPAIA AIREQLYEIA+QNVASARESR+SKKGRRGFEHV  SK
Subjt:  IKLEPNNAILFLSQLDLRVNNTLIKDQFLWDLNNYESDPEEFSRTLCKDLGIEDPEVGPAIAFAIREQLYEIAVQNVASARESRMSKKGRRGFEHVPVSK

Query:  TGGASVDLVKLFGHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR
        TGGASVDL+KLFGHRSS VRKRKDWDIYEPIVDLLSNEEVDALEAKEER AR
Subjt:  TGGASVDLVKLFGHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR

SwissProt top hitse value%identityAlignment
O42467 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 11.0e-1734.36Show/hide
Query:  HSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPP-AFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIPIKLEPN
        H  A        +E LVPIRLD+EI+GQ+ +DAFTWN ++      +FA+    DL L P AF+  I  +I+ Q+  + +    +  T +++I       
Subjt:  HSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPP-AFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIPIKLEPN

Query:  NAILFLSQLDLRVNNTLIKDQFLWDLNNYESDPEEFSRTLCKDLGIEDPEVGPAIAFAIREQL
               +L++ V N  + DQF WD++  E+ PE+F+  LC +LG +  E    IA++IR QL
Subjt:  NAILFLSQLDLRVNNTLIKDQFLWDLNNYESDPEEFSRTLCKDLGIEDPEVGPAIAFAIREQL

P93045 Chromatin structure-remodeling complex protein BSH9.8e-10675.79Show/hide
Query:  MKSSASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIP
        MK   S   K P KFR+PTAENLVPIRLDI+ +GQR+KDAFTWNPSDPD+EVV+FAKRTVKDLKLP AF+TQIAQSIQSQL++FR++EGQDMYTGEKIIP
Subjt:  MKSSASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIP

Query:  IKLEPNNAILFLSQLDLRVNNTLIKDQFLWDLNNYESDPEEFSRTLCKDLGIEDPEVGPAIAFAIREQLYEIAVQNVASARESRMSKKGRRGFEHVPVSK
        IK            LDLRVN+TLIKDQFLWDLNN+ESDPEEF+RTLCKDLG+EDPEVGPA+AFAIREQLYEIA+Q+VASARESR+SKKGRRG +H   SK
Subjt:  IKLEPNNAILFLSQLDLRVNNTLIKDQFLWDLNNYESDPEEFSRTLCKDLGIEDPEVGPAIAFAIREQLYEIAVQNVASARESRMSKKGRRGFEHVPVSK

Query:  TGGASVDLVKLFGHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR
          G S+DL+KLF  +SSVVRKRKD D+YEP+VDLL++EEVDALEA+EER AR
Subjt:  TGGASVDLVKLFGHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR

Q5U379 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-A3.4e-1834.97Show/hide
Query:  HSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPP-AFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIPIKLEPN
        H  A         E LVPIRLD+EIDGQ+ +DAFTWN ++      +FA+    DL L P  F+  IA +I+ Q+  + +    D    +++I       
Subjt:  HSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPP-AFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIPIKLEPN

Query:  NAILFLSQLDLRVNNTLIKDQFLWDLNNYESDPEEFSRTLCKDLGIEDPEVGPAIAFAIREQL
               +L++ V N  + DQF WD++  E+ PE+F+  LC +LG+   E    IA++IR QL
Subjt:  NAILFLSQLDLRVNNTLIKDQFLWDLNNYESDPEEFSRTLCKDLGIEDPEVGPAIAFAIREQL

Q6DFM1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 11.5e-1836.81Show/hide
Query:  HSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPP-AFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIPIKLEPN
        H  A        +E LVPIRLD+EIDGQ+ +DAFTWN ++      +FA+    DL L P AF+  IA +I+ Q+         + Y  + I    LE  
Subjt:  HSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPP-AFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIPIKLEPN

Query:  NAILFLSQLDLRVNNTLIKDQFLWDLNNYESDPEEFSRTLCKDLGIEDPEVGPAIAFAIREQL
        +    + +L++ V N  + DQF WD++  E+ PE+F+  LC +LG+   E    IA++IR QL
Subjt:  NAILFLSQLDLRVNNTLIKDQFLWDLNNYESDPEEFSRTLCKDLGIEDPEVGPAIAFAIREQL

Q6GQ82 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 12.6e-1836.81Show/hide
Query:  HSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPP-AFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIPIKLEPN
        H  A         E LVPIRLD+EIDGQ+ +DAFTWN ++      +FA+    DL L P AF+  IA +I+ Q+         + Y  + I    LE  
Subjt:  HSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPP-AFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIPIKLEPN

Query:  NAILFLSQLDLRVNNTLIKDQFLWDLNNYESDPEEFSRTLCKDLGIEDPEVGPAIAFAIREQL
        +    + +L++ V N  + DQF WD++  E+ PE+F+  LC +LG+   E    IA++IR QL
Subjt:  NAILFLSQLDLRVNNTLIKDQFLWDLNNYESDPEEFSRTLCKDLGIEDPEVGPAIAFAIREQL

Arabidopsis top hitse value%identityAlignment
AT3G17590.1 transcription regulatory protein SNF5, putative (BSH)6.9e-10775.79Show/hide
Query:  MKSSASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIP
        MK   S   K P KFR+PTAENLVPIRLDI+ +GQR+KDAFTWNPSDPD+EVV+FAKRTVKDLKLP AF+TQIAQSIQSQL++FR++EGQDMYTGEKIIP
Subjt:  MKSSASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIP

Query:  IKLEPNNAILFLSQLDLRVNNTLIKDQFLWDLNNYESDPEEFSRTLCKDLGIEDPEVGPAIAFAIREQLYEIAVQNVASARESRMSKKGRRGFEHVPVSK
        IK            LDLRVN+TLIKDQFLWDLNN+ESDPEEF+RTLCKDLG+EDPEVGPA+AFAIREQLYEIA+Q+VASARESR+SKKGRRG +H   SK
Subjt:  IKLEPNNAILFLSQLDLRVNNTLIKDQFLWDLNNYESDPEEFSRTLCKDLGIEDPEVGPAIAFAIREQLYEIAVQNVASARESRMSKKGRRGFEHVPVSK

Query:  TGGASVDLVKLFGHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR
          G S+DL+KLF  +SSVVRKRKD D+YEP+VDLL++EEVDALEA+EER AR
Subjt:  TGGASVDLVKLFGHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR

AT3G17590.2 transcription regulatory protein SNF5, putative (BSH)1.0e-10575.59Show/hide
Query:  MKSSASPHSKAPFKFRI--PTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKI
        MK   S   K P KFRI  PTAENLVPIRLDI+ +GQR+KDAFTWNPSDPD+EVV+FAKRTVKDLKLP AF+TQIAQSIQSQL++FR++EGQDMYTGEKI
Subjt:  MKSSASPHSKAPFKFRI--PTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKI

Query:  IPIKLEPNNAILFLSQLDLRVNNTLIKDQFLWDLNNYESDPEEFSRTLCKDLGIEDPEVGPAIAFAIREQLYEIAVQNVASARESRMSKKGRRGFEHVPV
        IPIK            LDLRVN+TLIKDQFLWDLNN+ESDPEEF+RTLCKDLG+EDPEVGPA+AFAIREQLYEIA+Q+VASARESR+SKKGRRG +H   
Subjt:  IPIKLEPNNAILFLSQLDLRVNNTLIKDQFLWDLNNYESDPEEFSRTLCKDLGIEDPEVGPAIAFAIREQLYEIAVQNVASARESRMSKKGRRGFEHVPV

Query:  SKTGGASVDLVKLFGHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR
        SK  G S+DL+KLF  +SSVVRKRKD D+YEP+VDLL++EEVDALEA+EER AR
Subjt:  SKTGGASVDLVKLFGHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAATCTTCGGCCTCACCTCACTCAAAAGCTCCGTTCAAGTTCAGGATTCCGACGGCGGAGAATCTAGTGCCAATTCGTTTGGACATTGAAATCGACGGTCAGAGGTT
CAAAGATGCCTTCACTTGGAACCCTTCTGATCCCGATTCAGAGGTGGTGGTCTTTGCAAAGAGGACGGTGAAAGATTTAAAGCTTCCTCCAGCATTTATAACACAAATTG
CACAATCCATTCAATCACAACTTACAGAATTTCGATCCTTTGAAGGTCAAGATATGTATACTGGTGAAAAGATTATTCCAATCAAGCTTGAGCCAAATAATGCAATTCTG
TTTCTTTCTCAGCTTGATCTCCGAGTGAACAATACGCTTATAAAGGATCAGTTTCTGTGGGACTTGAACAACTATGAGAGTGACCCTGAAGAGTTCTCCAGGACATTATG
CAAAGATTTGGGTATTGAAGACCCTGAAGTTGGACCTGCAATTGCTTTTGCGATTAGAGAACAGCTCTATGAGATAGCAGTGCAGAATGTTGCTTCAGCAAGAGAAAGCA
GAATGAGCAAGAAGGGCCGCCGAGGGTTCGAGCATGTTCCAGTAAGTAAAACTGGAGGTGCTTCGGTGGACTTGGTGAAGTTATTTGGTCATAGATCAAGTGTTGTTCGG
AAAAGAAAGGACTGGGACATTTACGAACCAATTGTCGATCTTCTATCCAATGAGGAAGTAGATGCCCTTGAAGCAAAAGAAGAGAGAACTGCTCGATAA
mRNA sequenceShow/hide mRNA sequence
GAATATCCGTCGATGTCGATGTCGATGTTCATCTATCTTTGAAACCTCATATCCACCACATCAACGTTTCTAAATCCAATCGCGAACGATCCAATTGCAATCCCTCTAAG
CTAAAAAAATTAAAACTCCCTAAATATAGAGAGTCGATTACAGATTCACCATGAAATCTTCGGCCTCACCTCACTCAAAAGCTCCGTTCAAGTTCAGGATTCCGACGGCG
GAGAATCTAGTGCCAATTCGTTTGGACATTGAAATCGACGGTCAGAGGTTCAAAGATGCCTTCACTTGGAACCCTTCTGATCCCGATTCAGAGGTGGTGGTCTTTGCAAA
GAGGACGGTGAAAGATTTAAAGCTTCCTCCAGCATTTATAACACAAATTGCACAATCCATTCAATCACAACTTACAGAATTTCGATCCTTTGAAGGTCAAGATATGTATA
CTGGTGAAAAGATTATTCCAATCAAGCTTGAGCCAAATAATGCAATTCTGTTTCTTTCTCAGCTTGATCTCCGAGTGAACAATACGCTTATAAAGGATCAGTTTCTGTGG
GACTTGAACAACTATGAGAGTGACCCTGAAGAGTTCTCCAGGACATTATGCAAAGATTTGGGTATTGAAGACCCTGAAGTTGGACCTGCAATTGCTTTTGCGATTAGAGA
ACAGCTCTATGAGATAGCAGTGCAGAATGTTGCTTCAGCAAGAGAAAGCAGAATGAGCAAGAAGGGCCGCCGAGGGTTCGAGCATGTTCCAGTAAGTAAAACTGGAGGTG
CTTCGGTGGACTTGGTGAAGTTATTTGGTCATAGATCAAGTGTTGTTCGGAAAAGAAAGGACTGGGACATTTACGAACCAATTGTCGATCTTCTATCCAATGAGGAAGTA
GATGCCCTTGAAGCAAAAGAAGAGAGAACTGCTCGATAATATATTCTCACTTACTGTTGTTGATCATATTGCTTCTATCGTCAAACAGCGTCGGCTTCCCAATGGAGGAG
ATGCATGGAGATGGGTGTAACAGCTCCTCGCAAATAGATTAAGAAGATTGAAAATGCTAATATAAGATAAGGGTATGCAACATAAATTAAACATGATCGAGAACGAAAGT
GCGTGAATGACATATCATTGTATATTGAAATCAATTGAAAATGACTAATAAAAGCACTTGATTCTAATAAATATAACACAAACACAATCTACTCTAATAATCACACTTTT
AATCAAAATTTCTAAAAGTTTAGATGATAATTCGATGAATT
Protein sequenceShow/hide protein sequence
MKSSASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSFEGQDMYTGEKIIPIKLEPNNAIL
FLSQLDLRVNNTLIKDQFLWDLNNYESDPEEFSRTLCKDLGIEDPEVGPAIAFAIREQLYEIAVQNVASARESRMSKKGRRGFEHVPVSKTGGASVDLVKLFGHRSSVVR
KRKDWDIYEPIVDLLSNEEVDALEAKEERTAR