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CaUC05G087690 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC05G087690
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionUnknown protein
Genome locationCiama_Chr05:8018061..8018814
RNA-Seq ExpressionCaUC05G087690
SyntenyCaUC05G087690
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6576804.1 hypothetical protein SDJN03_24378, partial [Cucurbita argyrosperma subsp. sororia]7.6e-0857.5Show/hide
Query:  MAS-TTLVAWEKVIFFALLLLAFNVSAREF-----VACTARESS---NGVM-GRRLIVRQLDIPRKGNYSPPPPRRHPPP
        MAS T LVAW+KV F   LL+A +VSARE      V  TARE +   NGV+ G RLI RQLD   +G+YSPPPPR  PPP
Subjt:  MAS-TTLVAWEKVIFFALLLLAFNVSAREF-----VACTARESS---NGVM-GRRLIVRQLDIPRKGNYSPPPPRRHPPP

KAG6600178.1 hypothetical protein SDJN03_05411, partial [Cucurbita argyrosperma subsp. sororia]1.1e-0961.04Show/hide
Query:  MAS-TTLVAWEKVIFFALLLLAFNVSARE-----FVACTARESS-NGVMGRRLIVRQLDIPRKGNYSPPPPRRHPPP
        MAS +  V W++V+FFALLLLAFNVSARE      VA T  E +    +GRRLI RQLD    GNYSPPPPRR PPP
Subjt:  MAS-TTLVAWEKVIFFALLLLAFNVSARE-----FVACTARESS-NGVMGRRLIVRQLDIPRKGNYSPPPPRRHPPP

KAG7014831.1 hypothetical protein SDJN02_22460, partial [Cucurbita argyrosperma subsp. argyrosperma]7.6e-0857.5Show/hide
Query:  MAS-TTLVAWEKVIFFALLLLAFNVSAREF-----VACTARESS---NGV-MGRRLIVRQLDIPRKGNYSPPPPRRHPPP
        MAS T LVAW+KV F   LL+A +VSARE      V  TARE +   NGV +G RLI RQLD   +G+YSPPPPR  PPP
Subjt:  MAS-TTLVAWEKVIFFALLLLAFNVSAREF-----VACTARESS---NGV-MGRRLIVRQLDIPRKGNYSPPPPRRHPPP

KAG7030841.1 hypothetical protein SDJN02_04878 [Cucurbita argyrosperma subsp. argyrosperma]6.2e-1061.04Show/hide
Query:  MAS-TTLVAWEKVIFFALLLLAFNVSARE-----FVACTARESS-NGVMGRRLIVRQLDIPRKGNYSPPPPRRHPPP
        MAS +  V W++V+FFALLLLAFNVSARE      VA T  E +    +GRRLI RQLD    GNYSPPPPRR PPP
Subjt:  MAS-TTLVAWEKVIFFALLLLAFNVSARE-----FVACTARESS-NGVMGRRLIVRQLDIPRKGNYSPPPPRRHPPP

KGN57260.1 hypothetical protein Csa_011296 [Cucumis sativus]1.7e-0759.15Show/hide
Query:  MASTTL--VAWEKV-IFFALLLLAFNVSAREFVACTARESS-----NGVMGRRLIVRQLDIPRKGNYSPPP
        MA+ T+  VAW+KV IFF LLLLA+N+SARE VA T  E S     N V+ RRL VRQLD   +GNY PPP
Subjt:  MASTTL--VAWEKV-IFFALLLLAFNVSAREFVACTARESS-----NGVMGRRLIVRQLDIPRKGNYSPPP

TrEMBL top hitse value%identityAlignment
A0A0A0L5K7 Uncharacterized protein8.2e-0859.15Show/hide
Query:  MASTTL--VAWEKV-IFFALLLLAFNVSAREFVACTARESS-----NGVMGRRLIVRQLDIPRKGNYSPPP
        MA+ T+  VAW+KV IFF LLLLA+N+SARE VA T  E S     N V+ RRL VRQLD   +GNY PPP
Subjt:  MASTTL--VAWEKV-IFFALLLLAFNVSAREFVACTARESS-----NGVMGRRLIVRQLDIPRKGNYSPPP

A0A0A0LB11 Uncharacterized protein2.6e-0655.07Show/hide
Query:  VIFFALLLLAFNVS-------AREFVACTARESSNGVMGRRLIVRQLDIPRKGNYSPPPPRRHPPPYSY
        ++FF+LLLLAFN S       ARE VA      +N  MGR+L  RQLD   KGNYSPPPP R PPP  Y
Subjt:  VIFFALLLLAFNVS-------AREFVACTARESSNGVMGRRLIVRQLDIPRKGNYSPPPPRRHPPPYSY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCAACAACTTTGGTTGCTTGGGAGAAGGTTATCTTCTTTGCTTTGCTTCTTCTTGCTTTCAATGTTTCGGCGAGAGAATTCGTCGCTTGCACAGCCCGTGAGTC
GTCCAATGGTGTGATGGGCAGAAGATTAATTGTTCGACAGTTGGATATCCCTAGGAAAGGAAATTATTCTCCTCCTCCTCCTCGTCGTCATCCTCCTCCCTACTCCTACT
AA
mRNA sequenceShow/hide mRNA sequence
AGTGGAGGTACTTTATTTTCAACGACCAAATTCATTGACTGCACTAACCTACCACTAAAATTTTCTAATTTGTAATTTCGTTGAAAGTGAGGCCCTCCCCATCAGGTTAT
TGTGTTAATTAGTTAATATTATACACACAAACACCAAATTAAAGTCCCTCTAATTCCACACATTCCTTTCTGAGCTTTCTACAATCACAAACTAATGGCTTCAACAACTT
TGGTTGCTTGGGAGAAGGTTATCTTCTTTGCTTTGCTTCTTCTTGCTTTCAATGTTTCGGCGAGAGAATTCGTCGCTTGCACAGCCCGTGAGTCGTCCAATGGTGTGATG
GGCAGAAGATTAATTGTTCGACAGTTGGATATCCCTAGGAAAGGAAATTATTCTCCTCCTCCTCCTCGTCGTCATCCTCCTCCCTACTCCTACTAAAGGCCAATTTCCTT
TGGCCTTGGTTGGGTTTGGATTAATAATTAAGGATCTCCACAAGTTGTATGAATCTCTTTTCCTTTTAAGGATGTATCTCTTCTAATGGTGTTGTGTGTGATTTTGGTGG
AGTTTAACGGTACAACTACAAATACTTTTTTTTTATGTTAAATTCAGTCTTAAATAATAATCAAAGTTGAATTAGTACCCTACTTTTGTTGAGCTTTATGA
Protein sequenceShow/hide protein sequence
MASTTLVAWEKVIFFALLLLAFNVSAREFVACTARESSNGVMGRRLIVRQLDIPRKGNYSPPPPRRHPPPYSY