; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CaUC05G088280 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC05G088280
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
Descriptionethylene-responsive transcription factor ERF027
Genome locationCiama_Chr05:8753627..8754205
RNA-Seq ExpressionCaUC05G088280
SyntenyCaUC05G088280
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR001471 - AP2/ERF domain
IPR016177 - DNA-binding domain superfamily
IPR036955 - AP2/ERF domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN57367.2 hypothetical protein Csa_010765 [Cucumis sativus]3.6e-5777.27Show/hide
Query:  MSDNNNNSPGRPGRHPLFRGIRSRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALSLKGPHASLNFPDSRNSYRIPLSTSASDIRAAAAIAAAS
        MSDNNNNSP  PGRH +FRGIRSRSGKWVSEIREPRK TRIWLGTYPTPEMAAAAYDVAAL+LKGP+ASLNFP S  SY IP STS SDIRAAAAIAAA+
Subjt:  MSDNNNNSPGRPGRHPLFRGIRSRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALSLKGPHASLNFPDSRNSYRIPLSTSASDIRAAAAIAAAS

Query:  RNLNNNNPGQASP---SAATAADSSDT---DGGGPSSHATADSSGKFVDEEELLNMPNLLVDMAEGMLVSPPRMKS
        RN       QASP   S AT  DSS T   DGGGPSSHAT D SGKFVDEEELLNMPNLLVDMA+GML+     KS
Subjt:  RNLNNNNPGQASP---SAATAADSSDT---DGGGPSSHATADSSGKFVDEEELLNMPNLLVDMAEGMLVSPPRMKS

TYK22276.1 ethylene-responsive transcription factor ERF027 [Cucumis melo var. makuwa]1.4e-7278.5Show/hide
Query:  SDNNNNSPGRPGRHPLFRGIRSRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALSLKGPHASLNFPDSRNSYRIPLSTSASDIRAAAAIAAASR
        ++NNNNSP  PGRH +FRGIRSRSGKWVSEIREPRK TRIWLGTYPTPEMAAAAYDVAAL+LKGP+ASLNFP S  SY IP STS SDIRAAAAIAAA+R
Subjt:  SDNNNNSPGRPGRHPLFRGIRSRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALSLKGPHASLNFPDSRNSYRIPLSTSASDIRAAAAIAAASR

Query:  NLNNNNPGQASPSAATAADSSDT---------DGGGPSSHATADSSGKFVDEEELLNMPNLLVDMAEGMLVSPPRMKSPSSDDSPTHSSQGDDGLWSYSK
        N NN +P QASP+AAT   ++ T         DGGGPSSHAT D SGKFVDEEELLNMPNLLVDMAEGMLVSPPRMKSPSSDD+  + SQGDDGLWSYSK
Subjt:  NLNNNNPGQASPSAATAADSSDT---------DGGGPSSHATADSSGKFVDEEELLNMPNLLVDMAEGMLVSPPRMKSPSSDDSPTHSSQGDDGLWSYSK

XP_004140856.1 ethylene-responsive transcription factor ERF025 [Cucumis sativus]1.2e-7180.3Show/hide
Query:  MSDNNNNSPGRPGRHPLFRGIRSRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALSLKGPHASLNFPDSRNSYRIPLSTSASDIRAAAAIAAAS
        MSDNNNNSP  PGRH +FRGIRSRSGKWVSEIREPRK TRIWLGTYPTPEMAAAAYDVAAL+LKGP+ASLNFP S  SY IP STS SDIRAAAAIAAA+
Subjt:  MSDNNNNSPGRPGRHPLFRGIRSRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALSLKGPHASLNFPDSRNSYRIPLSTSASDIRAAAAIAAAS

Query:  RNLNNNNPGQASP---SAATAADSSDT---DGGGPSSHATADSSGKFVDEEELLNMPNLLVDMAEGMLVSPPRMKSPSSDDSPTHSSQGDDGLWSYSK
        RN       QASP   S AT  DSS T   DGGGPSSHAT D SGKFVDEEELLNMPNLLVDMA+GMLVSPPRMKSPSSDD+  + SQGDDGLWSYSK
Subjt:  RNLNNNNPGQASP---SAATAADSSDT---DGGGPSSHATADSSGKFVDEEELLNMPNLLVDMAEGMLVSPPRMKSPSSDDSPTHSSQGDDGLWSYSK

XP_008439163.1 PREDICTED: ethylene-responsive transcription factor ERF027 [Cucumis melo]1.4e-7278.5Show/hide
Query:  SDNNNNSPGRPGRHPLFRGIRSRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALSLKGPHASLNFPDSRNSYRIPLSTSASDIRAAAAIAAASR
        ++NNNNSP  PGRH +FRGIRSRSGKWVSEIREPRK TRIWLGTYPTPEMAAAAYDVAAL+LKGP+ASLNFP S  SY IP STS SDIRAAAAIAAA+R
Subjt:  SDNNNNSPGRPGRHPLFRGIRSRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALSLKGPHASLNFPDSRNSYRIPLSTSASDIRAAAAIAAASR

Query:  NLNNNNPGQASPSAATAADSSDT---------DGGGPSSHATADSSGKFVDEEELLNMPNLLVDMAEGMLVSPPRMKSPSSDDSPTHSSQGDDGLWSYSK
        N NN +P QASP+AAT   ++ T         DGGGPSSHAT D SGKFVDEEELLNMPNLLVDMAEGMLVSPPRMKSPSSDD+  + SQGDDGLWSYSK
Subjt:  NLNNNNPGQASPSAATAADSSDT---------DGGGPSSHATADSSGKFVDEEELLNMPNLLVDMAEGMLVSPPRMKSPSSDDSPTHSSQGDDGLWSYSK

XP_038876501.1 LOW QUALITY PROTEIN: ethylene-responsive transcription factor ERF027 [Benincasa hispida]2.3e-6777.66Show/hide
Query:  MSDNNNNSPGRPGRHPLFRGIRSRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALSLKGPHASLNFPDSRNSYRIPLSTSASDIRAAAAIAAAS
        MSDNNNNS GRPGRHP+FRGIRSRSGKWVSEIR+PRKTTRIWLGTYPTPEM AAAYDVAAL+LKGP+ASLNFP S  SY    STS SDIR AAAIAAAS
Subjt:  MSDNNNNSPGRPGRHPLFRGIRSRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALSLKGPHASLNFPDSRNSYRIPLSTSASDIRAAAAIAAAS

Query:  RNLNNNNP--GQASPSAATAADSSDT---DGGGPSSHATADSSGKFVDEEELLNMPNLLVDMAEGMLVSPPRMKSPSS-DDSPTHSSQGDDGLWSYS
        R+     P    A+P+ A A  +S T   D GGPSSH TADSSGKF DEEELLNMPNLLVDMAEGMLVSPPRMKS SS DDSPTH S+GDD LWSYS
Subjt:  RNLNNNNP--GQASPSAATAADSSDT---DGGGPSSHATADSSGKFVDEEELLNMPNLLVDMAEGMLVSPPRMKSPSS-DDSPTHSSQGDDGLWSYS

TrEMBL top hitse value%identityAlignment
A0A0A0L6E0 AP2/ERF domain-containing protein5.6e-7280.3Show/hide
Query:  MSDNNNNSPGRPGRHPLFRGIRSRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALSLKGPHASLNFPDSRNSYRIPLSTSASDIRAAAAIAAAS
        MSDNNNNSP  PGRH +FRGIRSRSGKWVSEIREPRK TRIWLGTYPTPEMAAAAYDVAAL+LKGP+ASLNFP S  SY IP STS SDIRAAAAIAAA+
Subjt:  MSDNNNNSPGRPGRHPLFRGIRSRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALSLKGPHASLNFPDSRNSYRIPLSTSASDIRAAAAIAAAS

Query:  RNLNNNNPGQASP---SAATAADSSDT---DGGGPSSHATADSSGKFVDEEELLNMPNLLVDMAEGMLVSPPRMKSPSSDDSPTHSSQGDDGLWSYSK
        RN       QASP   S AT  DSS T   DGGGPSSHAT D SGKFVDEEELLNMPNLLVDMA+GMLVSPPRMKSPSSDD+  + SQGDDGLWSYSK
Subjt:  RNLNNNNPGQASP---SAATAADSSDT---DGGGPSSHATADSSGKFVDEEELLNMPNLLVDMAEGMLVSPPRMKSPSSDDSPTHSSQGDDGLWSYSK

A0A1S3AYS1 ethylene-responsive transcription factor ERF0276.6e-7378.5Show/hide
Query:  SDNNNNSPGRPGRHPLFRGIRSRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALSLKGPHASLNFPDSRNSYRIPLSTSASDIRAAAAIAAASR
        ++NNNNSP  PGRH +FRGIRSRSGKWVSEIREPRK TRIWLGTYPTPEMAAAAYDVAAL+LKGP+ASLNFP S  SY IP STS SDIRAAAAIAAA+R
Subjt:  SDNNNNSPGRPGRHPLFRGIRSRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALSLKGPHASLNFPDSRNSYRIPLSTSASDIRAAAAIAAASR

Query:  NLNNNNPGQASPSAATAADSSDT---------DGGGPSSHATADSSGKFVDEEELLNMPNLLVDMAEGMLVSPPRMKSPSSDDSPTHSSQGDDGLWSYSK
        N NN +P QASP+AAT   ++ T         DGGGPSSHAT D SGKFVDEEELLNMPNLLVDMAEGMLVSPPRMKSPSSDD+  + SQGDDGLWSYSK
Subjt:  NLNNNNPGQASPSAATAADSSDT---------DGGGPSSHATADSSGKFVDEEELLNMPNLLVDMAEGMLVSPPRMKSPSSDDSPTHSSQGDDGLWSYSK

A0A5A7SRR8 Ethylene-responsive transcription factor ERF0276.6e-7378.5Show/hide
Query:  SDNNNNSPGRPGRHPLFRGIRSRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALSLKGPHASLNFPDSRNSYRIPLSTSASDIRAAAAIAAASR
        ++NNNNSP  PGRH +FRGIRSRSGKWVSEIREPRK TRIWLGTYPTPEMAAAAYDVAAL+LKGP+ASLNFP S  SY IP STS SDIRAAAAIAAA+R
Subjt:  SDNNNNSPGRPGRHPLFRGIRSRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALSLKGPHASLNFPDSRNSYRIPLSTSASDIRAAAAIAAASR

Query:  NLNNNNPGQASPSAATAADSSDT---------DGGGPSSHATADSSGKFVDEEELLNMPNLLVDMAEGMLVSPPRMKSPSSDDSPTHSSQGDDGLWSYSK
        N NN +P QASP+AAT   ++ T         DGGGPSSHAT D SGKFVDEEELLNMPNLLVDMAEGMLVSPPRMKSPSSDD+  + SQGDDGLWSYSK
Subjt:  NLNNNNPGQASPSAATAADSSDT---------DGGGPSSHATADSSGKFVDEEELLNMPNLLVDMAEGMLVSPPRMKSPSSDDSPTHSSQGDDGLWSYSK

A0A5D3DFB2 Ethylene-responsive transcription factor ERF0276.6e-7378.5Show/hide
Query:  SDNNNNSPGRPGRHPLFRGIRSRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALSLKGPHASLNFPDSRNSYRIPLSTSASDIRAAAAIAAASR
        ++NNNNSP  PGRH +FRGIRSRSGKWVSEIREPRK TRIWLGTYPTPEMAAAAYDVAAL+LKGP+ASLNFP S  SY IP STS SDIRAAAAIAAA+R
Subjt:  SDNNNNSPGRPGRHPLFRGIRSRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALSLKGPHASLNFPDSRNSYRIPLSTSASDIRAAAAIAAASR

Query:  NLNNNNPGQASPSAATAADSSDT---------DGGGPSSHATADSSGKFVDEEELLNMPNLLVDMAEGMLVSPPRMKSPSSDDSPTHSSQGDDGLWSYSK
        N NN +P QASP+AAT   ++ T         DGGGPSSHAT D SGKFVDEEELLNMPNLLVDMAEGMLVSPPRMKSPSSDD+  + SQGDDGLWSYSK
Subjt:  NLNNNNPGQASPSAATAADSSDT---------DGGGPSSHATADSSGKFVDEEELLNMPNLLVDMAEGMLVSPPRMKSPSSDDSPTHSSQGDDGLWSYSK

A0A6J1HW14 ethylene-responsive transcription factor ERF027-like1.6e-5568.75Show/hide
Query:  NNNNSPGRPGRHPLFRGIRSRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALSLKGPHASLNFPDSRNSYRIPLSTSASDIRAAAAIAAASRNL
        ++++S     RHP FRG+RSRSGKWVSEIR+PR+TTRIWLGTYPTP+MAAAAYDVAAL+LKGP ASLNFPDS  SY IP STS SDIRAAAA+AAA+R+ 
Subjt:  NNNNSPGRPGRHPLFRGIRSRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALSLKGPHASLNFPDSRNSYRIPLSTSASDIRAAAAIAAASRNL

Query:  NNNNPGQASPSAATAADSSDTDGGGPSSHAT----ADSSGKFVDEEELLNMPNLLVDMAEGMLVSPPRMKSPSSDDSPTHSSQGDDGLWSYS
                +P+ A AA +    G G SS AT    A S+G+FVDEEELLNMPNLLVDMAEGMLVSPPR+KS SSDDSPT+S    DGLWSYS
Subjt:  NNNNPGQASPSAATAADSSDTDGGGPSSHAT----ADSSGKFVDEEELLNMPNLLVDMAEGMLVSPPRMKSPSSDDSPTHSSQGDDGLWSYS

SwissProt top hitse value%identityAlignment
Q38Q39 Ethylene-responsive transcription factor ERF0272.9e-4155.56Show/hide
Query:  GRPGRHPLFRGIRSRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALSLKGPHASLNFPDSRNSYRIPLSTSASDIRAAAAIAAASRNLNNNNPG
        G   + P++RGIR RSGKWVSEIREPRKTTRIWLGTYP  EMAAAAYDVAA++LKG  A LNFP S  SY +P STSA+DIRAAAA AAA +        
Subjt:  GRPGRHPLFRGIRSRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALSLKGPHASLNFPDSRNSYRIPLSTSASDIRAAAAIAAASRNLNNNNPG

Query:  QASPSAATAADSS-------DTDGGGPSSHATADSSGKFVDEEELLNMPNLLVDMAEGMLVSPPR-MKSPSSDDSPTHSSQGDDGLWSY
        + +    +++  S       D D G  S   T     +F+DEEE+LNMPNLL +MAEGM+V+PP  M S  SDDSP +S+  D+ LW Y
Subjt:  QASPSAATAADSS-------DTDGGGPSSHATADSSGKFVDEEELLNMPNLLVDMAEGMLVSPPR-MKSPSSDDSPTHSSQGDDGLWSY

Q9CAN9 Ethylene-responsive transcription factor ERF0267.3e-4560.22Show/hide
Query:  RPGRHPLFRGIRSRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALSLKGPHASLNFPDSRNSYRIPLSTSASDIRAAAAIAAASRNLNNNNPGQ
        R  ++P++RGIR RSGKWVSEIREP+KTTR+WLGTYPTPEMAAAAYDVAAL+LKG    LNFPDS  SY IPLS+SA+ IR AAA AAA+R       G 
Subjt:  RPGRHPLFRGIRSRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALSLKGPHASLNFPDSRNSYRIPLSTSASDIRAAAAIAAASRNLNNNNPGQ

Query:  ASPSAATAADSSDTDGGGPSSHATADSSGK-FVDEEELLNMPNLLVDMAEGMLVSPPRMKSPSSDDSPTHSSQGDDGLWSY
        A  +        D        + TA+SS   FVDEEELLNMP LL DMA+GM+V+PP M SP SDDSP +S    + LWSY
Subjt:  ASPSAATAADSSDTDGGGPSSHATADSSGK-FVDEEELLNMPNLLVDMAEGMLVSPPRMKSPSSDDSPTHSSQGDDGLWSY

Q9FJ90 Ethylene-responsive transcription factor ERF0256.6e-3851.58Show/hide
Query:  SDNNNNSPGRPGRHPLFRGIRSRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALSLKGPHASLNFPDSRNSYRIPLSTSASDIRAAAAIAAASR
        S     + G  G+H +FRGIR R+GKWVSEIREPRKTTRIWLGTYP PEMAAAAYDVAAL+LKGP A LNFP    +Y  P+S SA+DIRAAA+ AA  +
Subjt:  SDNNNNSPGRPGRHPLFRGIRSRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALSLKGPHASLNFPDSRNSYRIPLSTSASDIRAAAAIAAASR

Query:  NLNNNNPGQASPSAATAADSSDTDGGGPSSHATADSSGKFVDEEELLNMPNLLVDMAEGMLVSPPRMK-SPSSDDSPTHSSQGDDGLWSY
          +     +         +    +    S       S +F+DEE +LNMP LL +MAEGML+SPPRM   P+ +D    + +GD+ LWSY
Subjt:  NLNNNNPGQASPSAATAADSSDTDGGGPSSHATADSSGKFVDEEELLNMPNLLVDMAEGMLVSPPRMK-SPSSDDSPTHSSQGDDGLWSY

Q9FJ93 Dehydration-responsive element-binding protein 1D1.8e-2744.57Show/hide
Query:  RPGRHPLFRGIRSR-SGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALSLKGPHASLNFPDSRNSYRIPLSTSASDIRAAAAIAAASRNLNNNNPG
        R  RHP++RG+R R SGKWV E+REP K +RIWLGT+PT EMAA A+DVAAL+L+G  A LNF DS    RIP +T   +I+ AA+ AA +    N    
Subjt:  RPGRHPLFRGIRSR-SGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALSLKGPHASLNFPDSRNSYRIPLSTSASDIRAAAAIAAASRNLNNNNPG

Query:  QASPSAATAADSSDTDGGGPSSHATADSSGKF-VDEEELLNMPNLLVDMAEGMLVSPPRMKSPSSDDSPTHSSQGDDGLWSYSK
        + S +AA A +++          A   + G F +D+E LL MPN   +MAEGML+ PP +    +D        GD  LWS+ +
Subjt:  QASPSAATAADSSDTDGGGPSSHATADSSGKF-VDEEELLNMPNLLVDMAEGMLVSPPRMKSPSSDDSPTHSSQGDDGLWSYSK

Q9SJR0 Ethylene-responsive transcription factor ERF0242.9e-3351.1Show/hide
Query:  GRHPLFRGIRSR--SGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALSLKGPHASLNFPDSRNSYRIPLSTSASDIRAAAAIAAASRNLNNNNPGQ
        GRHPL+RG+R R  S KWVSEIREPRK  RIWLGT+ TPEMAA AYDVAAL+LKG  A LNFP+S +S   P S S +DI+AAAA AAA+        G 
Subjt:  GRHPLFRGIRSR--SGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALSLKGPHASLNFPDSRNSYRIPLSTSASDIRAAAAIAAASRNLNNNNPGQ

Query:  ASPSAATAADSSDTDGGG--PSSHATADSSGKFVDEEELLNMPNLLVDMAEGMLVSPPRMKSPSSDDSPTHSSQGDDGLWSY
        A  +   A ++S T G     SS+   + +G F+DE+ + +MPN+L++MAEGML+SPPR     +         GDD LW++
Subjt:  ASPSAATAADSSDTDGGG--PSSHATADSSGKFVDEEELLNMPNLLVDMAEGMLVSPPRMKSPSSDDSPTHSSQGDDGLWSY

Arabidopsis top hitse value%identityAlignment
AT1G12630.1 Integrase-type DNA-binding superfamily protein2.0e-4255.56Show/hide
Query:  GRPGRHPLFRGIRSRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALSLKGPHASLNFPDSRNSYRIPLSTSASDIRAAAAIAAASRNLNNNNPG
        G   + P++RGIR RSGKWVSEIREPRKTTRIWLGTYP  EMAAAAYDVAA++LKG  A LNFP S  SY +P STSA+DIRAAAA AAA +        
Subjt:  GRPGRHPLFRGIRSRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALSLKGPHASLNFPDSRNSYRIPLSTSASDIRAAAAIAAASRNLNNNNPG

Query:  QASPSAATAADSS-------DTDGGGPSSHATADSSGKFVDEEELLNMPNLLVDMAEGMLVSPPR-MKSPSSDDSPTHSSQGDDGLWSY
        + +    +++  S       D D G  S   T     +F+DEEE+LNMPNLL +MAEGM+V+PP  M S  SDDSP +S+  D+ LW Y
Subjt:  QASPSAATAADSS-------DTDGGGPSSHATADSSGKFVDEEELLNMPNLLVDMAEGMLVSPPR-MKSPSSDDSPTHSSQGDDGLWSY

AT2G36450.1 Integrase-type DNA-binding superfamily protein2.1e-3451.1Show/hide
Query:  GRHPLFRGIRSR--SGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALSLKGPHASLNFPDSRNSYRIPLSTSASDIRAAAAIAAASRNLNNNNPGQ
        GRHPL+RG+R R  S KWVSEIREPRK  RIWLGT+ TPEMAA AYDVAAL+LKG  A LNFP+S +S   P S S +DI+AAAA AAA+        G 
Subjt:  GRHPLFRGIRSR--SGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALSLKGPHASLNFPDSRNSYRIPLSTSASDIRAAAAIAAASRNLNNNNPGQ

Query:  ASPSAATAADSSDTDGGG--PSSHATADSSGKFVDEEELLNMPNLLVDMAEGMLVSPPRMKSPSSDDSPTHSSQGDDGLWSY
        A  +   A ++S T G     SS+   + +G F+DE+ + +MPN+L++MAEGML+SPPR     +         GDD LW++
Subjt:  ASPSAATAADSSDTDGGG--PSSHATADSSGKFVDEEELLNMPNLLVDMAEGMLVSPPRMKSPSSDDSPTHSSQGDDGLWSY

AT4G25490.1 C-repeat/DRE binding factor 16.4e-2846.15Show/hide
Query:  RPGRHPLFRGIRSR-SGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALSLKGPHASLNFPDSRNSYRIPLSTSASDIRAAAAIAAASRNLNNNNPG
        R  RHP++RG+R R SGKWVSE+REP K TRIWLGT+ T EMAA A+DVAAL+L+G  A LNF DS    RIP ST A DI+ AAA AA +         
Subjt:  RPGRHPLFRGIRSR-SGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALSLKGPHASLNFPDSRNSYRIPLSTSASDIRAAAAIAAASRNLNNNNPG

Query:  QASPSAATAADSSDTDGGGPSSHATADSSGKF-VDEEELLNMPNLLVDMAEGMLVSPPRMKSPSSDDSPTHSSQGDDGLWSY
        +   +  T       +    + +    S G F +DEE +  MP LL +MAEGML+ PP ++   + D       GD  LWSY
Subjt:  QASPSAATAADSSDTDGGGPSSHATADSSGKF-VDEEELLNMPNLLVDMAEGMLVSPPRMKSPSSDDSPTHSSQGDDGLWSY

AT5G51990.1 C-repeat-binding factor 41.3e-2844.57Show/hide
Query:  RPGRHPLFRGIRSR-SGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALSLKGPHASLNFPDSRNSYRIPLSTSASDIRAAAAIAAASRNLNNNNPG
        R  RHP++RG+R R SGKWV E+REP K +RIWLGT+PT EMAA A+DVAAL+L+G  A LNF DS    RIP +T   +I+ AA+ AA +    N    
Subjt:  RPGRHPLFRGIRSR-SGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALSLKGPHASLNFPDSRNSYRIPLSTSASDIRAAAAIAAASRNLNNNNPG

Query:  QASPSAATAADSSDTDGGGPSSHATADSSGKF-VDEEELLNMPNLLVDMAEGMLVSPPRMKSPSSDDSPTHSSQGDDGLWSYSK
        + S +AA A +++          A   + G F +D+E LL MPN   +MAEGML+ PP +    +D        GD  LWS+ +
Subjt:  QASPSAATAADSSDTDGGGPSSHATADSSGKF-VDEEELLNMPNLLVDMAEGMLVSPPRMKSPSSDDSPTHSSQGDDGLWSYSK

AT5G52020.1 Integrase-type DNA-binding superfamily protein4.7e-3951.58Show/hide
Query:  SDNNNNSPGRPGRHPLFRGIRSRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALSLKGPHASLNFPDSRNSYRIPLSTSASDIRAAAAIAAASR
        S     + G  G+H +FRGIR R+GKWVSEIREPRKTTRIWLGTYP PEMAAAAYDVAAL+LKGP A LNFP    +Y  P+S SA+DIRAAA+ AA  +
Subjt:  SDNNNNSPGRPGRHPLFRGIRSRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALSLKGPHASLNFPDSRNSYRIPLSTSASDIRAAAAIAAASR

Query:  NLNNNNPGQASPSAATAADSSDTDGGGPSSHATADSSGKFVDEEELLNMPNLLVDMAEGMLVSPPRMK-SPSSDDSPTHSSQGDDGLWSY
          +     +         +    +    S       S +F+DEE +LNMP LL +MAEGML+SPPRM   P+ +D    + +GD+ LWSY
Subjt:  NLNNNNPGQASPSAATAADSSDTDGGGPSSHATADSSGKFVDEEELLNMPNLLVDMAEGMLVSPPRMK-SPSSDDSPTHSSQGDDGLWSY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGATAATAATAATAATTCTCCCGGCCGCCCTGGTCGCCACCCCCTTTTCCGGGGTATCCGTTCCCGAAGTGGCAAATGGGTCTCTGAAATTCGCGAGCCA
CGTAAGACCACTCGCATTTGGCTCGGTACATACCCCACTCCCGAAATGGCCGCCGCCGCCTACGACGTCGCCGCCCTCTCTCTCAAAGGCCCTCATGCCTCCCTT
AATTTCCCCGACTCTCGTAATTCCTATCGCATTCCTCTTTCCACTTCCGCTTCTGACATTCGCGCCGCCGCCGCCATTGCCGCCGCCTCCAGAAACCTCAATAAC
AATAACCCCGGCCAGGCTTCTCCTTCTGCTGCTACTGCTGCTGATTCTTCAGATACCGACGGCGGTGGGCCCTCCTCCCATGCCACGGCGGATTCTTCCGGCAAG
TTTGTGGACGAGGAAGAGTTACTGAACATGCCCAATTTACTGGTGGACATGGCGGAGGGAATGCTGGTGAGTCCCCCTCGGATGAAATCGCCGTCGTCCGATGAC
TCTCCCACCCATTCTTCTCAAGGAGATGATGGATTATGGAGTTACTCCAAATAA
mRNA sequenceShow/hide mRNA sequence
ATGTCTGATAATAATAATAATTCTCCCGGCCGCCCTGGTCGCCACCCCCTTTTCCGGGGTATCCGTTCCCGAAGTGGCAAATGGGTCTCTGAAATTCGCGAGCCA
CGTAAGACCACTCGCATTTGGCTCGGTACATACCCCACTCCCGAAATGGCCGCCGCCGCCTACGACGTCGCCGCCCTCTCTCTCAAAGGCCCTCATGCCTCCCTT
AATTTCCCCGACTCTCGTAATTCCTATCGCATTCCTCTTTCCACTTCCGCTTCTGACATTCGCGCCGCCGCCGCCATTGCCGCCGCCTCCAGAAACCTCAATAAC
AATAACCCCGGCCAGGCTTCTCCTTCTGCTGCTACTGCTGCTGATTCTTCAGATACCGACGGCGGTGGGCCCTCCTCCCATGCCACGGCGGATTCTTCCGGCAAG
TTTGTGGACGAGGAAGAGTTACTGAACATGCCCAATTTACTGGTGGACATGGCGGAGGGAATGCTGGTGAGTCCCCCTCGGATGAAATCGCCGTCGTCCGATGAC
TCTCCCACCCATTCTTCTCAAGGAGATGATGGATTATGGAGTTACTCCAAATAA
Protein sequenceShow/hide protein sequence
MSDNNNNSPGRPGRHPLFRGIRSRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALSLKGPHASLNFPDSRNSYRIPLSTSASDIRAAAAIAAASRNLNN
NNPGQASPSAATAADSSDTDGGGPSSHATADSSGKFVDEEELLNMPNLLVDMAEGMLVSPPRMKSPSSDDSPTHSSQGDDGLWSYSK