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CaUC05G088480 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC05G088480
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionUnknown protein
Genome locationCiama_Chr05:8960038..8961598
RNA-Seq ExpressionCaUC05G088480
SyntenyCaUC05G088480
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PNR41211.1 hypothetical protein PHYPA_018614, partial [Physcomitrium patens]3.0e-0633.33Show/hide
Query:  QNHSEAVNVAFRSRPPTLPVLRWDVTKGSSNLSRDMSLTSTDQSCQSKVSNFWFKVLVEEYIACFNISVNDMGNNFSIRQS
        +NH+ A+N+A     P L +LR +VTK + N+  +M +   D+ CQS++ +   +V V++ +AC N++VND+ N   + ++
Subjt:  QNHSEAVNVAFRSRPPTLPVLRWDVTKGSSNLSRDMSLTSTDQSCQSKVSNFWFKVLVEEYIACFNISVNDMGNNFSIRQS
TrEMBL top hitse value%identityAlignment
A0A2K1JI29 Uncharacterized protein (Fragment)1.5e-0633.33Show/hide
Query:  QNHSEAVNVAFRSRPPTLPVLRWDVTKGSSNLSRDMSLTSTDQSCQSKVSNFWFKVLVEEYIACFNISVNDMGNNFSIRQS
        +NH+ A+N+A     P L +LR +VTK + N+  +M +   D+ CQS++ +   +V V++ +AC N++VND+ N   + ++
Subjt:  QNHSEAVNVAFRSRPPTLPVLRWDVTKGSSNLSRDMSLTSTDQSCQSKVSNFWFKVLVEEYIACFNISVNDMGNNFSIRQS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAAATCACTCCGAAGCTGTAAACGTCGCCTTTCGTAGTCGACCGCCCACTCTGCCCGTACTCCGGTGGGATGTAACCAAAGGTTCCAGCAATCTCAGTCGTGACAT
GAGTCTCACAAGCACTGATCAATCTTGCCAATCCAAAGTCAGCAACTTTTGGTTCAAAGTCTTGGTTGAGGAGTATATTGCTTGCTTTAACATCTCTGTGAATGATATGG
GCAACAACTTTTCCATCAGGCAAAGTGGCCTTGTAGACGGTCCCGAATCCTCCATCTCCAATAATAGATTGGGGTCTATGAAACTGTTTAATTTGCTTTCCTCCATTTCC
TCTGGATCATTATCTCTCTGTCTTCTAATAATCCGTCTTCTCATGGCAAACGCCACAGTTAGAACAATAAGAACGCTAACAATGATAATCCCAGCAACACTCCAAGCATT
CAAGACTGCAGATCTTTCTAAGCTTTTGATCCGGCAATTGAAACCCAGGATTCTCCCACAAAGGTCCTTGTTACCGGCAAGTGAACTTTTGGATAGATTCTGGCAAATGC
CACTTCTCGGAATTGGCCCTTCAAGACTGTTTTCTGCTAAATTCAGATAA
mRNA sequenceShow/hide mRNA sequence
ATGCAAAATCACTCCGAAGCTGTAAACGTCGCCTTTCGTAGTCGACCGCCCACTCTGCCCGTACTCCGGTGGGATGTAACCAAAGGTTCCAGCAATCTCAGTCGTGACAT
GAGTCTCACAAGCACTGATCAATCTTGCCAATCCAAAGTCAGCAACTTTTGGTTCAAAGTCTTGGTTGAGGAGTATATTGCTTGCTTTAACATCTCTGTGAATGATATGG
GCAACAACTTTTCCATCAGGCAAAGTGGCCTTGTAGACGGTCCCGAATCCTCCATCTCCAATAATAGATTGGGGTCTATGAAACTGTTTAATTTGCTTTCCTCCATTTCC
TCTGGATCATTATCTCTCTGTCTTCTAATAATCCGTCTTCTCATGGCAAACGCCACAGTTAGAACAATAAGAACGCTAACAATGATAATCCCAGCAACACTCCAAGCATT
CAAGACTGCAGATCTTTCTAAGCTTTTGATCCGGCAATTGAAACCCAGGATTCTCCCACAAAGGTCCTTGTTACCGGCAAGTGAACTTTTGGATAGATTCTGGCAAATGC
CACTTCTCGGAATTGGCCCTTCAAGACTGTTTTCTGCTAAATTCAGATAA
Protein sequenceShow/hide protein sequence
MQNHSEAVNVAFRSRPPTLPVLRWDVTKGSSNLSRDMSLTSTDQSCQSKVSNFWFKVLVEEYIACFNISVNDMGNNFSIRQSGLVDGPESSISNNRLGSMKLFNLLSSIS
SGSLSLCLLIIRLLMANATVRTIRTLTMIIPATLQAFKTADLSKLLIRQLKPRILPQRSLLPASELLDRFWQMPLLGIGPSRLFSAKFR