; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CaUC05G089010 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC05G089010
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
Descriptionprotein REVEILLE 6-like isoform X1
Genome locationCiama_Chr05:9463729..9467736
RNA-Seq ExpressionCaUC05G089010
SyntenyCaUC05G089010
Gene Ontology termsGO:0003677 - DNA binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033691.1 protein REVEILLE 6-like isoform X4 [Cucumis melo var. makuwa]4.1e-4576.09Show/hide
Query:  PSPSAERAGLSHSTINSSKLFNSLALVPGPFQPSSVEPKYNIKPDSSSTPASFIFAAAMSSRADNSIQTVNFSQGARGQVTENNCSSSTDRTTRTRFPTK
        P P  +R         +SK  N +ALV  PFQ SSVEPKYNIKPDSSS PASFI A AMSSRADNSIQTVNFSQGARGQV ENNCSSSTDRTTRTRFPTK
Subjt:  PSPSAERAGLSHSTINSSKLFNSLALVPGPFQPSSVEPKYNIKPDSSSTPASFIFAAAMSSRADNSIQTVNFSQGARGQVTENNCSSSTDRTTRTRFPTK

Query:  SSIKEHNNFQLRVLPYFGQVYNYIGSVFDPKTLGHLQR
        SSI+EHNN QLRVLP FGQVYN+IGSVFDPK   HL+R
Subjt:  SSIKEHNNFQLRVLPYFGQVYNYIGSVFDPKTLGHLQR

XP_008439276.1 PREDICTED: protein REVEILLE 6-like isoform X1 [Cucumis melo]1.3e-4371.72Show/hide
Query:  PSPSAERAGLSHSTINSSKLFNSLALVPGPFQPSSVEPKYNIKPDSSSTPASFIFAAAMSSRADNSIQTVNFSQGARG-------QVTENNCSSSTDRTT
        P P  +R         +SK  + +ALV  PFQ SSVEPKYNIKPDSSS PASFI A AMSSRADNSIQTVNFSQGARG       QV ENNCSSSTDRTT
Subjt:  PSPSAERAGLSHSTINSSKLFNSLALVPGPFQPSSVEPKYNIKPDSSSTPASFIFAAAMSSRADNSIQTVNFSQGARG-------QVTENNCSSSTDRTT

Query:  RTRFPTKSSIKEHNNFQLRVLPYFGQVYNYIGSVFDPKTLGHLQR
        RTRFPTKSSI+EHNN QLRVLP FGQVYN+IGSVFDPK   HL+R
Subjt:  RTRFPTKSSIKEHNNFQLRVLPYFGQVYNYIGSVFDPKTLGHLQR

XP_008439277.1 PREDICTED: protein REVEILLE 6-like isoform X2 [Cucumis melo]5.0e-4372.41Show/hide
Query:  PSPSAERAGLSHSTINSSKLFNSLALVPGPFQPSSVEPKYNIKPDSSSTPASFIFAAAMSSRADNSIQTVNFSQGARG-------QVTENNCSSSTDRTT
        P P  +R         +SK  N +ALV  PFQ SSVEPKYNIKPDSSS PASFI A AMSSRADNSIQTVNFSQGARG       QV ENNCSSSTDRTT
Subjt:  PSPSAERAGLSHSTINSSKLFNSLALVPGPFQPSSVEPKYNIKPDSSSTPASFIFAAAMSSRADNSIQTVNFSQGARG-------QVTENNCSSSTDRTT

Query:  RTRFPTKSSIKEHNNFQLRVLPYFGQVYNYIGSVFDPKTLGHLQR
        RTRFPTKSSI+EHNN QLRVLP FGQVYN+IGSVFDPK   HL+R
Subjt:  RTRFPTKSSIKEHNNFQLRVLPYFGQVYNYIGSVFDPKTLGHLQR

XP_008439278.1 PREDICTED: protein REVEILLE 6-like isoform X3 [Cucumis melo]1.1e-4575.36Show/hide
Query:  PSPSAERAGLSHSTINSSKLFNSLALVPGPFQPSSVEPKYNIKPDSSSTPASFIFAAAMSSRADNSIQTVNFSQGARGQVTENNCSSSTDRTTRTRFPTK
        P P  +R         +SK  + +ALV  PFQ SSVEPKYNIKPDSSS PASFI A AMSSRADNSIQTVNFSQGARGQV ENNCSSSTDRTTRTRFPTK
Subjt:  PSPSAERAGLSHSTINSSKLFNSLALVPGPFQPSSVEPKYNIKPDSSSTPASFIFAAAMSSRADNSIQTVNFSQGARGQVTENNCSSSTDRTTRTRFPTK

Query:  SSIKEHNNFQLRVLPYFGQVYNYIGSVFDPKTLGHLQR
        SSI+EHNN QLRVLP FGQVYN+IGSVFDPK   HL+R
Subjt:  SSIKEHNNFQLRVLPYFGQVYNYIGSVFDPKTLGHLQR

XP_008439279.1 PREDICTED: protein REVEILLE 6-like isoform X4 [Cucumis melo]4.1e-4576.09Show/hide
Query:  PSPSAERAGLSHSTINSSKLFNSLALVPGPFQPSSVEPKYNIKPDSSSTPASFIFAAAMSSRADNSIQTVNFSQGARGQVTENNCSSSTDRTTRTRFPTK
        P P  +R         +SK  N +ALV  PFQ SSVEPKYNIKPDSSS PASFI A AMSSRADNSIQTVNFSQGARGQV ENNCSSSTDRTTRTRFPTK
Subjt:  PSPSAERAGLSHSTINSSKLFNSLALVPGPFQPSSVEPKYNIKPDSSSTPASFIFAAAMSSRADNSIQTVNFSQGARGQVTENNCSSSTDRTTRTRFPTK

Query:  SSIKEHNNFQLRVLPYFGQVYNYIGSVFDPKTLGHLQR
        SSI+EHNN QLRVLP FGQVYN+IGSVFDPK   HL+R
Subjt:  SSIKEHNNFQLRVLPYFGQVYNYIGSVFDPKTLGHLQR

TrEMBL top hitse value%identityAlignment
A0A1S3AY10 protein REVEILLE 6-like isoform X16.3e-4471.72Show/hide
Query:  PSPSAERAGLSHSTINSSKLFNSLALVPGPFQPSSVEPKYNIKPDSSSTPASFIFAAAMSSRADNSIQTVNFSQGARG-------QVTENNCSSSTDRTT
        P P  +R         +SK  + +ALV  PFQ SSVEPKYNIKPDSSS PASFI A AMSSRADNSIQTVNFSQGARG       QV ENNCSSSTDRTT
Subjt:  PSPSAERAGLSHSTINSSKLFNSLALVPGPFQPSSVEPKYNIKPDSSSTPASFIFAAAMSSRADNSIQTVNFSQGARG-------QVTENNCSSSTDRTT

Query:  RTRFPTKSSIKEHNNFQLRVLPYFGQVYNYIGSVFDPKTLGHLQR
        RTRFPTKSSI+EHNN QLRVLP FGQVYN+IGSVFDPK   HL+R
Subjt:  RTRFPTKSSIKEHNNFQLRVLPYFGQVYNYIGSVFDPKTLGHLQR

A0A1S3AYE0 protein REVEILLE 6-like isoform X35.2e-4675.36Show/hide
Query:  PSPSAERAGLSHSTINSSKLFNSLALVPGPFQPSSVEPKYNIKPDSSSTPASFIFAAAMSSRADNSIQTVNFSQGARGQVTENNCSSSTDRTTRTRFPTK
        P P  +R         +SK  + +ALV  PFQ SSVEPKYNIKPDSSS PASFI A AMSSRADNSIQTVNFSQGARGQV ENNCSSSTDRTTRTRFPTK
Subjt:  PSPSAERAGLSHSTINSSKLFNSLALVPGPFQPSSVEPKYNIKPDSSSTPASFIFAAAMSSRADNSIQTVNFSQGARGQVTENNCSSSTDRTTRTRFPTK

Query:  SSIKEHNNFQLRVLPYFGQVYNYIGSVFDPKTLGHLQR
        SSI+EHNN QLRVLP FGQVYN+IGSVFDPK   HL+R
Subjt:  SSIKEHNNFQLRVLPYFGQVYNYIGSVFDPKTLGHLQR

A0A1S3AYG1 protein REVEILLE 6-like isoform X22.4e-4372.41Show/hide
Query:  PSPSAERAGLSHSTINSSKLFNSLALVPGPFQPSSVEPKYNIKPDSSSTPASFIFAAAMSSRADNSIQTVNFSQGARG-------QVTENNCSSSTDRTT
        P P  +R         +SK  N +ALV  PFQ SSVEPKYNIKPDSSS PASFI A AMSSRADNSIQTVNFSQGARG       QV ENNCSSSTDRTT
Subjt:  PSPSAERAGLSHSTINSSKLFNSLALVPGPFQPSSVEPKYNIKPDSSSTPASFIFAAAMSSRADNSIQTVNFSQGARG-------QVTENNCSSSTDRTT

Query:  RTRFPTKSSIKEHNNFQLRVLPYFGQVYNYIGSVFDPKTLGHLQR
        RTRFPTKSSI+EHNN QLRVLP FGQVYN+IGSVFDPK   HL+R
Subjt:  RTRFPTKSSIKEHNNFQLRVLPYFGQVYNYIGSVFDPKTLGHLQR

A0A1S3AZ30 protein REVEILLE 6-like isoform X42.0e-4576.09Show/hide
Query:  PSPSAERAGLSHSTINSSKLFNSLALVPGPFQPSSVEPKYNIKPDSSSTPASFIFAAAMSSRADNSIQTVNFSQGARGQVTENNCSSSTDRTTRTRFPTK
        P P  +R         +SK  N +ALV  PFQ SSVEPKYNIKPDSSS PASFI A AMSSRADNSIQTVNFSQGARGQV ENNCSSSTDRTTRTRFPTK
Subjt:  PSPSAERAGLSHSTINSSKLFNSLALVPGPFQPSSVEPKYNIKPDSSSTPASFIFAAAMSSRADNSIQTVNFSQGARGQVTENNCSSSTDRTTRTRFPTK

Query:  SSIKEHNNFQLRVLPYFGQVYNYIGSVFDPKTLGHLQR
        SSI+EHNN QLRVLP FGQVYN+IGSVFDPK   HL+R
Subjt:  SSIKEHNNFQLRVLPYFGQVYNYIGSVFDPKTLGHLQR

A0A5A7SW78 Protein REVEILLE 6-like isoform X42.0e-4576.09Show/hide
Query:  PSPSAERAGLSHSTINSSKLFNSLALVPGPFQPSSVEPKYNIKPDSSSTPASFIFAAAMSSRADNSIQTVNFSQGARGQVTENNCSSSTDRTTRTRFPTK
        P P  +R         +SK  N +ALV  PFQ SSVEPKYNIKPDSSS PASFI A AMSSRADNSIQTVNFSQGARGQV ENNCSSSTDRTTRTRFPTK
Subjt:  PSPSAERAGLSHSTINSSKLFNSLALVPGPFQPSSVEPKYNIKPDSSSTPASFIFAAAMSSRADNSIQTVNFSQGARGQVTENNCSSSTDRTTRTRFPTK

Query:  SSIKEHNNFQLRVLPYFGQVYNYIGSVFDPKTLGHLQR
        SSI+EHNN QLRVLP FGQVYN+IGSVFDPK   HL+R
Subjt:  SSIKEHNNFQLRVLPYFGQVYNYIGSVFDPKTLGHLQR

SwissProt top hitse value%identityAlignment
C0SVG5 Protein REVEILLE 57.3e-0534.23Show/hide
Query:  VEPKYNIKPDSSSTPASFIFAAAMSSRADNS--------IQTVNFSQGARGQVTENNCSSSTDRTTRTRFPTKSSIKEHNNFQLRVLPYFGQVYNYIGSV
        +EP Y    DS S   +    A+ SS  ++         I+       A   +  N C    + T R R  TK + +E      RV+P F +VY++IGSV
Subjt:  VEPKYNIKPDSSSTPASFIFAAAMSSRADNS--------IQTVNFSQGARGQVTENNCSSSTDRTTRTRFPTKSSIKEHNNFQLRVLPYFGQVYNYIGSV

Query:  FDPKTLGHLQR
        FDP T GHLQR
Subjt:  FDPKTLGHLQR

Q6R0H0 Protein REVEILLE 32.0e-0751.67Show/hide
Query:  VTENNCSSSTDR-TTRTRFPTKSSIKEHNNFQLRVLPYFGQVYNYIGSVFDPKTLGHLQR
        V+EN CS+S+ R   RTR  T+++ +E      RV P F +VYN+IGSVFDPKT GH++R
Subjt:  VTENNCSSSTDR-TTRTRFPTKSSIKEHNNFQLRVLPYFGQVYNYIGSVFDPKTLGHLQR

Q8H0W3 Protein REVEILLE 67.5e-1040.17Show/hide
Query:  VPGPFQPSSV--EPKYNIKPDSSSTPASFIFAAAMSSRADNSIQTVNFSQGAR-GQVTENNCSSSTDRTTRTRFPTKSSIKEHNN--FQLRVLPYFGQVY
        VPG F+ +S   +P +  +P+SSS   +    AA +   +N+ QT++F+   + G    NNCSSS++ T R R  +    ++H N    LRVLP F QVY
Subjt:  VPGPFQPSSV--EPKYNIKPDSSSTPASFIFAAAMSSRADNSIQTVNFSQGAR-GQVTENNCSSSTDRTTRTRFPTKSSIKEHNN--FQLRVLPYFGQVY

Query:  NYIGSVFDPKTLGHLQR
         +IGSVFDP    HLQ+
Subjt:  NYIGSVFDPKTLGHLQR

Arabidopsis top hitse value%identityAlignment
AT1G01520.1 Homeodomain-like superfamily protein1.5e-0851.67Show/hide
Query:  VTENNCSSSTDR-TTRTRFPTKSSIKEHNNFQLRVLPYFGQVYNYIGSVFDPKTLGHLQR
        V+EN CS+S+ R   RTR  T+++ +E      RV P F +VYN+IGSVFDPKT GH++R
Subjt:  VTENNCSSSTDR-TTRTRFPTKSSIKEHNNFQLRVLPYFGQVYNYIGSVFDPKTLGHLQR

AT4G01280.1 Homeodomain-like superfamily protein8.8e-0633.93Show/hide
Query:  VEPKYNIKPDSSSTPASFIFAAAMSSRADNSIQTVNFSQ---------GARGQVTENNCSSSTDRTTRTRFPTKSSIKEHNNFQLRVLPYFGQVYNYIGS
        +EP Y    DS S   +    A+ SS  ++  ++ N  +          A   +  N C    + T R R  TK + +E      RV+P F +VY++IGS
Subjt:  VEPKYNIKPDSSSTPASFIFAAAMSSRADNSIQTVNFSQ---------GARGQVTENNCSSSTDRTTRTRFPTKSSIKEHNNFQLRVLPYFGQVYNYIGS

Query:  VFDPKTLGHLQR
        VFDP T GHLQR
Subjt:  VFDPKTLGHLQR

AT4G01280.2 Homeodomain-like superfamily protein5.2e-0634.23Show/hide
Query:  VEPKYNIKPDSSSTPASFIFAAAMSSRADNS--------IQTVNFSQGARGQVTENNCSSSTDRTTRTRFPTKSSIKEHNNFQLRVLPYFGQVYNYIGSV
        +EP Y    DS S   +    A+ SS  ++         I+       A   +  N C    + T R R  TK + +E      RV+P F +VY++IGSV
Subjt:  VEPKYNIKPDSSSTPASFIFAAAMSSRADNS--------IQTVNFSQGARGQVTENNCSSSTDRTTRTRFPTKSSIKEHNNFQLRVLPYFGQVYNYIGSV

Query:  FDPKTLGHLQR
        FDP T GHLQR
Subjt:  FDPKTLGHLQR

AT5G52660.1 Homeodomain-like superfamily protein2.2e-1240.52Show/hide
Query:  VPGPFQPSSV--EPKYNIKPDSSSTPASFIFAAAMSSRADNSIQTVNFSQGARGQVTENNCSSSTDRTTRTRFPTKSSIKEHNN--FQLRVLPYFGQVYN
        VPG F+ +S   +P +  +P+SSS   +    AA +   +N+ QT++F+   +G    NNCSSS++ T R R  +    ++H N    LRVLP F QVY 
Subjt:  VPGPFQPSSV--EPKYNIKPDSSSTPASFIFAAAMSSRADNSIQTVNFSQGARGQVTENNCSSSTDRTTRTRFPTKSSIKEHNN--FQLRVLPYFGQVYN

Query:  YIGSVFDPKTLGHLQR
        +IGSVFDP    HLQ+
Subjt:  YIGSVFDPKTLGHLQR

AT5G52660.2 Homeodomain-like superfamily protein5.3e-1140.17Show/hide
Query:  VPGPFQPSSV--EPKYNIKPDSSSTPASFIFAAAMSSRADNSIQTVNFSQGAR-GQVTENNCSSSTDRTTRTRFPTKSSIKEHNN--FQLRVLPYFGQVY
        VPG F+ +S   +P +  +P+SSS   +    AA +   +N+ QT++F+   + G    NNCSSS++ T R R  +    ++H N    LRVLP F QVY
Subjt:  VPGPFQPSSV--EPKYNIKPDSSSTPASFIFAAAMSSRADNSIQTVNFSQGAR-GQVTENNCSSSTDRTTRTRFPTKSSIKEHNN--FQLRVLPYFGQVY

Query:  NYIGSVFDPKTLGHLQR
         +IGSVFDP    HLQ+
Subjt:  NYIGSVFDPKTLGHLQR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCACTGGCAACTGCAAACTGCCATTTCTCGAACCTCGCGTTCGGGCTGAGCCCGGCTGGTGTTTCCAAATTGGATTCGTACAAATGGCGTTACCGTTTGACACTGCA
ACGACGTCGTCGAGAGATGATCTATCGAAGAGAGCTCAGAAGCTTTACACCATCACCAAGTGCAGAGAGAGCGGGACTGAGCCATAGCACGATAAATTCTTCGAAGCTAT
TCAACTCTCTTGCACTAGTGCCAGGGCCATTTCAACCTTCTTCTGTTGAACCAAAATATAATATAAAGCCAGATTCCTCTTCTACTCCAGCGAGTTTCATTTTTGCTGCC
GCGATGTCATCCAGGGCGGATAACTCTATCCAGACAGTCAATTTCTCGCAAGGTGCAAGAGGGCAAGTTACAGAAAACAATTGTAGCAGTAGCACAGACCGCACAACAAG
AACACGCTTTCCAACTAAATCAAGCATCAAGGAACACAACAACTTTCAGTTGAGAGTACTGCCATATTTTGGTCAAGTCTACAACTACATTGGCAGCGTGTTCGACCCAA
AAACCTTAGGTCATTTGCAGAGAAAAGGATACTCTCATCATATGACGCCTTCATGGAACATGGTTAGTAATAACAAGAAAGCTGGAGAATTTCGCTCTTGTAGATGGGAA
TGGCAGCTGGCAACTACTAGCTACTACTTCACCGAATTGTACCTAATTGAGCCTTCCTCAATGCACTACTGTACTAGATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCACTGGCAACTGCAAACTGCCATTTCTCGAACCTCGCGTTCGGGCTGAGCCCGGCTGGTGTTTCCAAATTGGATTCGTACAAATGGCGTTACCGTTTGACACTGCA
ACGACGTCGTCGAGAGATGATCTATCGAAGAGAGCTCAGAAGCTTTACACCATCACCAAGTGCAGAGAGAGCGGGACTGAGCCATAGCACGATAAATTCTTCGAAGCTAT
TCAACTCTCTTGCACTAGTGCCAGGGCCATTTCAACCTTCTTCTGTTGAACCAAAATATAATATAAAGCCAGATTCCTCTTCTACTCCAGCGAGTTTCATTTTTGCTGCC
GCGATGTCATCCAGGGCGGATAACTCTATCCAGACAGTCAATTTCTCGCAAGGTGCAAGAGGGCAAGTTACAGAAAACAATTGTAGCAGTAGCACAGACCGCACAACAAG
AACACGCTTTCCAACTAAATCAAGCATCAAGGAACACAACAACTTTCAGTTGAGAGTACTGCCATATTTTGGTCAAGTCTACAACTACATTGGCAGCGTGTTCGACCCAA
AAACCTTAGGTCATTTGCAGAGAAAAGGATACTCTCATCATATGACGCCTTCATGGAACATGGTTAGTAATAACAAGAAAGCTGGAGAATTTCGCTCTTGTAGATGGGAA
TGGCAGCTGGCAACTACTAGCTACTACTTCACCGAATTGTACCTAATTGAGCCTTCCTCAATGCACTACTGTACTAGATAACCAGTCTTGTATTATTGTATATTCGCCCA
CTATCATTTCTTAGAGCAAGAAAAATTGAGGAACATTCTCTATATACCTCTATTTCGAAAATGAACCTGACATCCGCTTTTCAATGAACATAAAGGAATCTTGGGAAATT
TTCCTAAAAGTTAGAGCCAAATATGAATAAGAAAATCAAAGGATGGAAATTTTCAAATTCGACGAAGCGGTTCTTG
Protein sequenceShow/hide protein sequence
MALATANCHFSNLAFGLSPAGVSKLDSYKWRYRLTLQRRRREMIYRRELRSFTPSPSAERAGLSHSTINSSKLFNSLALVPGPFQPSSVEPKYNIKPDSSSTPASFIFAA
AMSSRADNSIQTVNFSQGARGQVTENNCSSSTDRTTRTRFPTKSSIKEHNNFQLRVLPYFGQVYNYIGSVFDPKTLGHLQRKGYSHHMTPSWNMVSNNKKAGEFRSCRWE
WQLATTSYYFTELYLIEPSSMHYCTR