; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CaUC05G089090 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC05G089090
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionPentatricopeptide repeat-containing protein
Genome locationCiama_Chr05:9519391..9522172
RNA-Seq ExpressionCaUC05G089090
SyntenyCaUC05G089090
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily
IPR044646 - Pentatricopeptide repeat-containing protein EMB1417-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK23004.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]7.0e-15589.14Show/hide
Query:  MLTLIYSFPVISKRIESVKFSWCASSSVVCAAKGPRPRYPRVWKTKKRIGTISKAAKLVDCIKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLEN
        MLTL+Y+FPV SKRIESV FSWC SSSVVCAAKGPRPRYPRVWKT+KRIGTISKAAKLVDC+KGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLEN
Subjt:  MLTLIYSFPVISKRIESVKFSWCASSSVVCAAKGPRPRYPRVWKTKKRIGTISKAAKLVDCIKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLEN

Query:  QREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQHLESMPRLFFHKMISLYYDRAMHNKLFEVFADMEELGVQPNMAIVTMV
        QREWKRIIQLTKWMLSKGQGRTMGSYFTLLNAL EDGRLDEAEELWNKLFSQ+LESMPR+FFHKMISLYYDRAMH+KLFEVFADMEELGVQPNMAIVT V
Subjt:  QREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQHLESMPRLFFHKMISLYYDRAMHNKLFEVFADMEELGVQPNMAIVTMV

Query:  GNVFHELGMLDKYEKLMKKYPPPKWEYRYVKGKRVRIRSKYLYENGNSNNGSSELDKMEHSSTKPLEEAEITSEDSSLEDDEEMSEDPDEILDDECMSKE
        GN+F ELGMLDKYEKLMKKYPPPKWEYRY+KGKRV+IR+KYL ENGNS NG SE +KMEHSST  L+EAEITSEDSSLEDDEE+ +DPDEIL+DE M  +
Subjt:  GNVFHELGMLDKYEKLMKKYPPPKWEYRYVKGKRVRIRSKYLYENGNSNNGSSELDKMEHSSTKPLEEAEITSEDSSLEDDEEMSEDPDEILDDECMSKE

Query:  SNFEHDFMGFGQL
        SNFEHDFMG GQL
Subjt:  SNFEHDFMGFGQL

XP_004140747.2 pentatricopeptide repeat-containing protein At4g21190 [Cucumis sativus]8.3e-15688.85Show/hide
Query:  LSIFLNACVWMLTLIYSFPVISKRIESVKFSWCASSSVVCAAKGPRPRYPRVWKTKKRIGTISKAAKLVDCIKGLSNVKEEVYGALDSFIAWELEFPLIT
        LS FL A   MLTL+Y+FPV SKRIESV FSWC SSSVVCAAKGPRPRYPRVWKTKKRIGTISKAAKLVDC+KGLSNVKEEVYGALDSFIAWELEFPLIT
Subjt:  LSIFLNACVWMLTLIYSFPVISKRIESVKFSWCASSSVVCAAKGPRPRYPRVWKTKKRIGTISKAAKLVDCIKGLSNVKEEVYGALDSFIAWELEFPLIT

Query:  VKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQHLESMPRLFFHKMISLYYDRAMHNKLFEVFADMEELGV
        VKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQHLES+PR+FFHKMISLYYD+AMH+KLFEVFADMEELGV
Subjt:  VKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQHLESMPRLFFHKMISLYYDRAMHNKLFEVFADMEELGV

Query:  QPNMAIVTMVGNVFHELGMLDKYEKLMKKYPPPKWEYRYVKGKRVRIRSKYLYENGNSNNGSSELDKMEHSSTKPLEEAEITSEDSSLEDDEEMSEDPDE
        QPNMAIVT VGNVF ELGMLDKY+KLMKKYPPPKWEYRY+KGKRV+IR+KYL ENGNSNNG SE  KMEHSST  ++EAEITSEDSSLEDDE+MSEDPDE
Subjt:  QPNMAIVTMVGNVFHELGMLDKYEKLMKKYPPPKWEYRYVKGKRVRIRSKYLYENGNSNNGSSELDKMEHSSTKPLEEAEITSEDSSLEDDEEMSEDPDE

Query:  ILDDECMSKESNFEHDFMGFGQL
        IL+DE M  +SNFEHDFMG GQL
Subjt:  ILDDECMSKESNFEHDFMGFGQL

XP_008439301.1 PREDICTED: pentatricopeptide repeat-containing protein At4g21190 isoform X2 [Cucumis melo]1.2e-15489.14Show/hide
Query:  MLTLIYSFPVISKRIESVKFSWCASSSVVCAAKGPRPRYPRVWKTKKRIGTISKAAKLVDCIKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLEN
        MLTL+Y+FPV SKRIESV FSWC SSSVVCAAKGPRPRYPRVWKT+KRIGTISKAAKLVDC+KGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLEN
Subjt:  MLTLIYSFPVISKRIESVKFSWCASSSVVCAAKGPRPRYPRVWKTKKRIGTISKAAKLVDCIKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLEN

Query:  QREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQHLESMPRLFFHKMISLYYDRAMHNKLFEVFADMEELGVQPNMAIVTMV
        QREWKRIIQLTKWMLSKGQGRTMGSYFTLLNAL EDGRLDEAEELWNKLFSQ+LESMPR+FFHKMISLYYDRAMH+KLFEVFADMEELGVQPNMAIVT V
Subjt:  QREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQHLESMPRLFFHKMISLYYDRAMHNKLFEVFADMEELGVQPNMAIVTMV

Query:  GNVFHELGMLDKYEKLMKKYPPPKWEYRYVKGKRVRIRSKYLYENGNSNNGSSELDKMEHSSTKPLEEAEITSEDSSLEDDEEMSEDPDEILDDECMSKE
        GN+F ELGMLDKYEKLMKKYPPPKWEYRY+KGKRV+IR+KYL ENGNS NG SE +KMEHSST  L+EAEITSEDSSLEDDEE+ +DPDEIL+DE M  +
Subjt:  GNVFHELGMLDKYEKLMKKYPPPKWEYRYVKGKRVRIRSKYLYENGNSNNGSSELDKMEHSSTKPLEEAEITSEDSSLEDDEEMSEDPDEILDDECMSKE

Query:  SNFEHDFMGFGQL
        SNFEHDFMG GQL
Subjt:  SNFEHDFMGFGQL

XP_038888232.1 pentatricopeptide repeat-containing protein At4g21190 isoform X1 [Benincasa hispida]5.9e-16293.29Show/hide
Query:  MLTLIYSFPVISKRIESVKFSWCASSSVVCAAKGPRPRYPRVWKTKKRIGTISKAAKLVDCIKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLEN
        MLTLIYSFPVISKRIESV FSWCASSSVVCAAKGPRPRYPRVWKTKKRIGT+SKAAKLVDC+KGLSNVKEEVYGALDSFIAWELEFPLITVKKAL+TLEN
Subjt:  MLTLIYSFPVISKRIESVKFSWCASSSVVCAAKGPRPRYPRVWKTKKRIGTISKAAKLVDCIKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLEN

Query:  QREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQHLESMPRLFFHKMISLYYDRAMHNKLFEVFADMEELGVQPNMAIVTMV
        QREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQHLESMPR+FFHKMISLYYDRAMH+KLFEVFADMEELGVQPNM IVTMV
Subjt:  QREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQHLESMPRLFFHKMISLYYDRAMHNKLFEVFADMEELGVQPNMAIVTMV

Query:  GNVFHELGMLDKYEKLMKKYPPPKWEYRYVKGKRVRIRSKYLYENGNSNNGSSELDKMEHSSTKPLEEAEITSEDSSLEDDEEMSEDPDEILDDECMSKE
        GNVFHELGMLDKYEKLMKKYPPPKWEYRY+KGKRVRIRSKYLYENGN NN  S+ DKMEHSSTK LEEAEITSED++LEDD EMSEDP+EI  DECMSKE
Subjt:  GNVFHELGMLDKYEKLMKKYPPPKWEYRYVKGKRVRIRSKYLYENGNSNNGSSELDKMEHSSTKPLEEAEITSEDSSLEDDEEMSEDPDEILDDECMSKE

Query:  SNFEHDFMGFGQL
         NFEHDFMGFGQL
Subjt:  SNFEHDFMGFGQL

XP_038888233.1 pentatricopeptide repeat-containing protein At4g21190 isoform X2 [Benincasa hispida]5.9e-16293.29Show/hide
Query:  MLTLIYSFPVISKRIESVKFSWCASSSVVCAAKGPRPRYPRVWKTKKRIGTISKAAKLVDCIKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLEN
        MLTLIYSFPVISKRIESV FSWCASSSVVCAAKGPRPRYPRVWKTKKRIGT+SKAAKLVDC+KGLSNVKEEVYGALDSFIAWELEFPLITVKKAL+TLEN
Subjt:  MLTLIYSFPVISKRIESVKFSWCASSSVVCAAKGPRPRYPRVWKTKKRIGTISKAAKLVDCIKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLEN

Query:  QREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQHLESMPRLFFHKMISLYYDRAMHNKLFEVFADMEELGVQPNMAIVTMV
        QREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQHLESMPR+FFHKMISLYYDRAMH+KLFEVFADMEELGVQPNM IVTMV
Subjt:  QREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQHLESMPRLFFHKMISLYYDRAMHNKLFEVFADMEELGVQPNMAIVTMV

Query:  GNVFHELGMLDKYEKLMKKYPPPKWEYRYVKGKRVRIRSKYLYENGNSNNGSSELDKMEHSSTKPLEEAEITSEDSSLEDDEEMSEDPDEILDDECMSKE
        GNVFHELGMLDKYEKLMKKYPPPKWEYRY+KGKRVRIRSKYLYENGN NN  S+ DKMEHSSTK LEEAEITSED++LEDD EMSEDP+EI  DECMSKE
Subjt:  GNVFHELGMLDKYEKLMKKYPPPKWEYRYVKGKRVRIRSKYLYENGNSNNGSSELDKMEHSSTKPLEEAEITSEDSSLEDDEEMSEDPDEILDDECMSKE

Query:  SNFEHDFMGFGQL
         NFEHDFMGFGQL
Subjt:  SNFEHDFMGFGQL

TrEMBL top hitse value%identityAlignment
A0A0A0L6Q9 Uncharacterized protein4.0e-15688.85Show/hide
Query:  LSIFLNACVWMLTLIYSFPVISKRIESVKFSWCASSSVVCAAKGPRPRYPRVWKTKKRIGTISKAAKLVDCIKGLSNVKEEVYGALDSFIAWELEFPLIT
        LS FL A   MLTL+Y+FPV SKRIESV FSWC SSSVVCAAKGPRPRYPRVWKTKKRIGTISKAAKLVDC+KGLSNVKEEVYGALDSFIAWELEFPLIT
Subjt:  LSIFLNACVWMLTLIYSFPVISKRIESVKFSWCASSSVVCAAKGPRPRYPRVWKTKKRIGTISKAAKLVDCIKGLSNVKEEVYGALDSFIAWELEFPLIT

Query:  VKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQHLESMPRLFFHKMISLYYDRAMHNKLFEVFADMEELGV
        VKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQHLES+PR+FFHKMISLYYD+AMH+KLFEVFADMEELGV
Subjt:  VKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQHLESMPRLFFHKMISLYYDRAMHNKLFEVFADMEELGV

Query:  QPNMAIVTMVGNVFHELGMLDKYEKLMKKYPPPKWEYRYVKGKRVRIRSKYLYENGNSNNGSSELDKMEHSSTKPLEEAEITSEDSSLEDDEEMSEDPDE
        QPNMAIVT VGNVF ELGMLDKY+KLMKKYPPPKWEYRY+KGKRV+IR+KYL ENGNSNNG SE  KMEHSST  ++EAEITSEDSSLEDDE+MSEDPDE
Subjt:  QPNMAIVTMVGNVFHELGMLDKYEKLMKKYPPPKWEYRYVKGKRVRIRSKYLYENGNSNNGSSELDKMEHSSTKPLEEAEITSEDSSLEDDEEMSEDPDE

Query:  ILDDECMSKESNFEHDFMGFGQL
        IL+DE M  +SNFEHDFMG GQL
Subjt:  ILDDECMSKESNFEHDFMGFGQL

A0A1S3AY30 pentatricopeptide repeat-containing protein At4g21190 isoform X25.8e-15589.14Show/hide
Query:  MLTLIYSFPVISKRIESVKFSWCASSSVVCAAKGPRPRYPRVWKTKKRIGTISKAAKLVDCIKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLEN
        MLTL+Y+FPV SKRIESV FSWC SSSVVCAAKGPRPRYPRVWKT+KRIGTISKAAKLVDC+KGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLEN
Subjt:  MLTLIYSFPVISKRIESVKFSWCASSSVVCAAKGPRPRYPRVWKTKKRIGTISKAAKLVDCIKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLEN

Query:  QREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQHLESMPRLFFHKMISLYYDRAMHNKLFEVFADMEELGVQPNMAIVTMV
        QREWKRIIQLTKWMLSKGQGRTMGSYFTLLNAL EDGRLDEAEELWNKLFSQ+LESMPR+FFHKMISLYYDRAMH+KLFEVFADMEELGVQPNMAIVT V
Subjt:  QREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQHLESMPRLFFHKMISLYYDRAMHNKLFEVFADMEELGVQPNMAIVTMV

Query:  GNVFHELGMLDKYEKLMKKYPPPKWEYRYVKGKRVRIRSKYLYENGNSNNGSSELDKMEHSSTKPLEEAEITSEDSSLEDDEEMSEDPDEILDDECMSKE
        GN+F ELGMLDKYEKLMKKYPPPKWEYRY+KGKRV+IR+KYL ENGNS NG SE +KMEHSST  L+EAEITSEDSSLEDDEE+ +DPDEIL+DE M  +
Subjt:  GNVFHELGMLDKYEKLMKKYPPPKWEYRYVKGKRVRIRSKYLYENGNSNNGSSELDKMEHSSTKPLEEAEITSEDSSLEDDEEMSEDPDEILDDECMSKE

Query:  SNFEHDFMGFGQL
        SNFEHDFMG GQL
Subjt:  SNFEHDFMGFGQL

A0A1S4DTK8 pentatricopeptide repeat-containing protein At4g21190 isoform X12.9e-15485.33Show/hide
Query:  LPVKLSLFLVLSIFLNACVW-MLTLIYSFPVISKRIESVKFSWCASSSVVCAAKGPRPRYPRVWKTKKRIGTISKAAKLVDCIKGLSNVKEEVYGALDSF
        L + +S+   L IF   C + MLTL+Y+FPV SKRIESV FSWC SSSVVCAAKGPRPRYPRVWKT+KRIGTISKAAKLVDC+KGLSNVKEEVYGALDSF
Subjt:  LPVKLSLFLVLSIFLNACVW-MLTLIYSFPVISKRIESVKFSWCASSSVVCAAKGPRPRYPRVWKTKKRIGTISKAAKLVDCIKGLSNVKEEVYGALDSF

Query:  IAWELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQHLESMPRLFFHKMISLYYDRAMHNKLF
        IAWELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNAL EDGRLDEAEELWNKLFSQ+LESMPR+FFHKMISLYYDRAMH+KLF
Subjt:  IAWELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQHLESMPRLFFHKMISLYYDRAMHNKLF

Query:  EVFADMEELGVQPNMAIVTMVGNVFHELGMLDKYEKLMKKYPPPKWEYRYVKGKRVRIRSKYLYENGNSNNGSSELDKMEHSSTKPLEEAEITSEDSSLE
        EVFADMEELGVQPNMAIVT VGN+F ELGMLDKYEKLMKKYPPPKWEYRY+KGKRV+IR+KYL ENGNS NG SE +KMEHSST  L+EAEITSEDSSLE
Subjt:  EVFADMEELGVQPNMAIVTMVGNVFHELGMLDKYEKLMKKYPPPKWEYRYVKGKRVRIRSKYLYENGNSNNGSSELDKMEHSSTKPLEEAEITSEDSSLE

Query:  DDEEMSEDPDEILDDECMSKESNFEHDFMGFGQL
        DDEE+ +DPDEIL+DE M  +SNFEHDFMG GQL
Subjt:  DDEEMSEDPDEILDDECMSKESNFEHDFMGFGQL

A0A5A7SS06 Pentatricopeptide repeat-containing protein5.8e-15589.14Show/hide
Query:  MLTLIYSFPVISKRIESVKFSWCASSSVVCAAKGPRPRYPRVWKTKKRIGTISKAAKLVDCIKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLEN
        MLTL+Y+FPV SKRIESV FSWC SSSVVCAAKGPRPRYPRVWKT+KRIGTISKAAKLVDC+KGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLEN
Subjt:  MLTLIYSFPVISKRIESVKFSWCASSSVVCAAKGPRPRYPRVWKTKKRIGTISKAAKLVDCIKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLEN

Query:  QREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQHLESMPRLFFHKMISLYYDRAMHNKLFEVFADMEELGVQPNMAIVTMV
        QREWKRIIQLTKWMLSKGQGRTMGSYFTLLNAL EDGRLDEAEELWNKLFSQ+LESMPR+FFHKMISLYYDRAMH+KLFEVFADMEELGVQPNMAIVT V
Subjt:  QREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQHLESMPRLFFHKMISLYYDRAMHNKLFEVFADMEELGVQPNMAIVTMV

Query:  GNVFHELGMLDKYEKLMKKYPPPKWEYRYVKGKRVRIRSKYLYENGNSNNGSSELDKMEHSSTKPLEEAEITSEDSSLEDDEEMSEDPDEILDDECMSKE
        GN+F ELGMLDKYEKLMKKYPPPKWEYRY+KGKRV+IR+KYL ENGNS NG SE +KMEHSST  L+EAEITSEDSSLEDDEE+ +DPDEIL+DE M  +
Subjt:  GNVFHELGMLDKYEKLMKKYPPPKWEYRYVKGKRVRIRSKYLYENGNSNNGSSELDKMEHSSTKPLEEAEITSEDSSLEDDEEMSEDPDEILDDECMSKE

Query:  SNFEHDFMGFGQL
        SNFEHDFMG GQL
Subjt:  SNFEHDFMGFGQL

A0A5D3DHA7 Pentatricopeptide repeat-containing protein3.4e-15589.14Show/hide
Query:  MLTLIYSFPVISKRIESVKFSWCASSSVVCAAKGPRPRYPRVWKTKKRIGTISKAAKLVDCIKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLEN
        MLTL+Y+FPV SKRIESV FSWC SSSVVCAAKGPRPRYPRVWKT+KRIGTISKAAKLVDC+KGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLEN
Subjt:  MLTLIYSFPVISKRIESVKFSWCASSSVVCAAKGPRPRYPRVWKTKKRIGTISKAAKLVDCIKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLEN

Query:  QREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQHLESMPRLFFHKMISLYYDRAMHNKLFEVFADMEELGVQPNMAIVTMV
        QREWKRIIQLTKWMLSKGQGRTMGSYFTLLNAL EDGRLDEAEELWNKLFSQ+LESMPR+FFHKMISLYYDRAMH+KLFEVFADMEELGVQPNMAIVT V
Subjt:  QREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQHLESMPRLFFHKMISLYYDRAMHNKLFEVFADMEELGVQPNMAIVTMV

Query:  GNVFHELGMLDKYEKLMKKYPPPKWEYRYVKGKRVRIRSKYLYENGNSNNGSSELDKMEHSSTKPLEEAEITSEDSSLEDDEEMSEDPDEILDDECMSKE
        GN+F ELGMLDKYEKLMKKYPPPKWEYRY+KGKRV+IR+KYL ENGNS NG SE +KMEHSST  L+EAEITSEDSSLEDDEE+ +DPDEIL+DE M  +
Subjt:  GNVFHELGMLDKYEKLMKKYPPPKWEYRYVKGKRVRIRSKYLYENGNSNNGSSELDKMEHSSTKPLEEAEITSEDSSLEDDEEMSEDPDEILDDECMSKE

Query:  SNFEHDFMGFGQL
        SNFEHDFMG GQL
Subjt:  SNFEHDFMGFGQL

SwissProt top hitse value%identityAlignment
Q2V3H0 Pentatricopeptide repeat-containing protein At4g18975, chloroplastic1.2e-4345.59Show/hide
Query:  VWKTKKRIGTISKAAKLVDCIKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDE
        +WK     G+  KA  LV  + GL N KE VYGAL+ ++AWE+EFP+I   KAL+ L  + +W R+IQL KWMLSKGQG TMG+Y  LL A   D R DE
Subjt:  VWKTKKRIGTISKAAKLVDCIKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDE

Query:  AEELWNKLFSQHLESMPRLFFHKMISLYYDRAMHNKLFEVFADMEELGVQPNMAIVTMVGNVFHELGMLDKYEKLMKKYPPPKWEYRYVKGKRVRIRSKY
        AE LWN +   H  S+PR  F +MI+LY    +H+K+ EVFADMEEL V P+      V   F EL   +  + ++++Y   +++Y Y  G+RVR++ +Y
Subjt:  AEELWNKLFSQHLESMPRLFFHKMISLYYDRAMHNKLFEVFADMEELGVQPNMAIVTMVGNVFHELGMLDKYEKLMKKYPPPKWEYRYVKGKRVRIRSKY

Query:  LYEN
          E+
Subjt:  LYEN

Q8LG95 Pentatricopeptide repeat-containing protein At4g211902.7e-10164.1Show/hide
Query:  MLTLIYSFP--VISKRIESVK-FSWCASSSVVCAAKGPRPRYPRVWKTKKRIGTISKAAKLVDCIKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKT
        ML+L YS P  ++  R  S K F+   ++ VVCAA+GPRPR PRVWKT+KRIGTISKAAK++ CIKGLSNVKEEVYGALDSFIAWELEFPL+ VKKAL  
Subjt:  MLTLIYSFP--VISKRIESVK-FSWCASSSVVCAAKGPRPRYPRVWKTKKRIGTISKAAKLVDCIKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKT

Query:  LENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQHLESMPRLFFHKMISLYYDRAMHNKLFEVFADMEELGVQPNMAIV
        LE+++EWK+IIQ+TKWMLSKGQGRTMG+YF+LLNALAED RLDEAEELWNKLF +HLE  PR FF+KMIS+YY R MH KLFEVFADMEELGV+PN+AIV
Subjt:  LENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQHLESMPRLFFHKMISLYYDRAMHNKLFEVFADMEELGVQPNMAIV

Query:  TMVGNVFHELGMLDKYEKLMKKYPPPKWEYRYVKGKRVRIRSKYLYENGNSNNG-SSELDKMEHSSTKPLEEAEITSEDSSLEDDEEMSEDPDEIL---D
        +MVG VF +L M DKYEKLMKKYPPP+WE+RY+KG+RV++++K L E      G SS+ DK+++         EI SE+   ED  E  ED  E+L    
Subjt:  TMVGNVFHELGMLDKYEKLMKKYPPPKWEYRYVKGKRVRIRSKYLYENGNSNNG-SSELDKMEHSSTKPLEEAEITSEDSSLEDDEEMSEDPDEIL---D

Query:  DECMSKESNFEH
         +  S+E + +H
Subjt:  DECMSKESNFEH

Arabidopsis top hitse value%identityAlignment
AT4G18975.1 Pentatricopeptide repeat (PPR) superfamily protein8.2e-4545.59Show/hide
Query:  VWKTKKRIGTISKAAKLVDCIKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDE
        +WK     G+  KA  LV  + GL N KE VYGAL+ ++AWE+EFP+I   KAL+ L  + +W R+IQL KWMLSKGQG TMG+Y  LL A   D R DE
Subjt:  VWKTKKRIGTISKAAKLVDCIKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDE

Query:  AEELWNKLFSQHLESMPRLFFHKMISLYYDRAMHNKLFEVFADMEELGVQPNMAIVTMVGNVFHELGMLDKYEKLMKKYPPPKWEYRYVKGKRVRIRSKY
        AE LWN +   H  S+PR  F +MI+LY    +H+K+ EVFADMEEL V P+      V   F EL   +  + ++++Y   +++Y Y  G+RVR++ +Y
Subjt:  AEELWNKLFSQHLESMPRLFFHKMISLYYDRAMHNKLFEVFADMEELGVQPNMAIVTMVGNVFHELGMLDKYEKLMKKYPPPKWEYRYVKGKRVRIRSKY

Query:  LYEN
          E+
Subjt:  LYEN

AT4G18975.2 Pentatricopeptide repeat (PPR) superfamily protein8.2e-4545.59Show/hide
Query:  VWKTKKRIGTISKAAKLVDCIKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDE
        +WK     G+  KA  LV  + GL N KE VYGAL+ ++AWE+EFP+I   KAL+ L  + +W R+IQL KWMLSKGQG TMG+Y  LL A   D R DE
Subjt:  VWKTKKRIGTISKAAKLVDCIKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDE

Query:  AEELWNKLFSQHLESMPRLFFHKMISLYYDRAMHNKLFEVFADMEELGVQPNMAIVTMVGNVFHELGMLDKYEKLMKKYPPPKWEYRYVKGKRVRIRSKY
        AE LWN +   H  S+PR  F +MI+LY    +H+K+ EVFADMEEL V P+      V   F EL   +  + ++++Y   +++Y Y  G+RVR++ +Y
Subjt:  AEELWNKLFSQHLESMPRLFFHKMISLYYDRAMHNKLFEVFADMEELGVQPNMAIVTMVGNVFHELGMLDKYEKLMKKYPPPKWEYRYVKGKRVRIRSKY

Query:  LYEN
          E+
Subjt:  LYEN

AT4G18975.3 Pentatricopeptide repeat (PPR) superfamily protein8.2e-4545.59Show/hide
Query:  VWKTKKRIGTISKAAKLVDCIKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDE
        +WK     G+  KA  LV  + GL N KE VYGAL+ ++AWE+EFP+I   KAL+ L  + +W R+IQL KWMLSKGQG TMG+Y  LL A   D R DE
Subjt:  VWKTKKRIGTISKAAKLVDCIKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDE

Query:  AEELWNKLFSQHLESMPRLFFHKMISLYYDRAMHNKLFEVFADMEELGVQPNMAIVTMVGNVFHELGMLDKYEKLMKKYPPPKWEYRYVKGKRVRIRSKY
        AE LWN +   H  S+PR  F +MI+LY    +H+K+ EVFADMEEL V P+      V   F EL   +  + ++++Y   +++Y Y  G+RVR++ +Y
Subjt:  AEELWNKLFSQHLESMPRLFFHKMISLYYDRAMHNKLFEVFADMEELGVQPNMAIVTMVGNVFHELGMLDKYEKLMKKYPPPKWEYRYVKGKRVRIRSKY

Query:  LYEN
          E+
Subjt:  LYEN

AT4G18975.4 Pentatricopeptide repeat (PPR) superfamily protein8.2e-4545.59Show/hide
Query:  VWKTKKRIGTISKAAKLVDCIKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDE
        +WK     G+  KA  LV  + GL N KE VYGAL+ ++AWE+EFP+I   KAL+ L  + +W R+IQL KWMLSKGQG TMG+Y  LL A   D R DE
Subjt:  VWKTKKRIGTISKAAKLVDCIKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDE

Query:  AEELWNKLFSQHLESMPRLFFHKMISLYYDRAMHNKLFEVFADMEELGVQPNMAIVTMVGNVFHELGMLDKYEKLMKKYPPPKWEYRYVKGKRVRIRSKY
        AE LWN +   H  S+PR  F +MI+LY    +H+K+ EVFADMEEL V P+      V   F EL   +  + ++++Y   +++Y Y  G+RVR++ +Y
Subjt:  AEELWNKLFSQHLESMPRLFFHKMISLYYDRAMHNKLFEVFADMEELGVQPNMAIVTMVGNVFHELGMLDKYEKLMKKYPPPKWEYRYVKGKRVRIRSKY

Query:  LYEN
          E+
Subjt:  LYEN

AT4G21190.1 Pentatricopeptide repeat (PPR) superfamily protein1.9e-10264.1Show/hide
Query:  MLTLIYSFP--VISKRIESVK-FSWCASSSVVCAAKGPRPRYPRVWKTKKRIGTISKAAKLVDCIKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKT
        ML+L YS P  ++  R  S K F+   ++ VVCAA+GPRPR PRVWKT+KRIGTISKAAK++ CIKGLSNVKEEVYGALDSFIAWELEFPL+ VKKAL  
Subjt:  MLTLIYSFP--VISKRIESVK-FSWCASSSVVCAAKGPRPRYPRVWKTKKRIGTISKAAKLVDCIKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKT

Query:  LENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQHLESMPRLFFHKMISLYYDRAMHNKLFEVFADMEELGVQPNMAIV
        LE+++EWK+IIQ+TKWMLSKGQGRTMG+YF+LLNALAED RLDEAEELWNKLF +HLE  PR FF+KMIS+YY R MH KLFEVFADMEELGV+PN+AIV
Subjt:  LENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQHLESMPRLFFHKMISLYYDRAMHNKLFEVFADMEELGVQPNMAIV

Query:  TMVGNVFHELGMLDKYEKLMKKYPPPKWEYRYVKGKRVRIRSKYLYENGNSNNG-SSELDKMEHSSTKPLEEAEITSEDSSLEDDEEMSEDPDEIL---D
        +MVG VF +L M DKYEKLMKKYPPP+WE+RY+KG+RV++++K L E      G SS+ DK+++         EI SE+   ED  E  ED  E+L    
Subjt:  TMVGNVFHELGMLDKYEKLMKKYPPPKWEYRYVKGKRVRIRSKYLYENGNSNNG-SSELDKMEHSSTKPLEEAEITSEDSSLEDDEEMSEDPDEIL---D

Query:  DECMSKESNFEH
         +  S+E + +H
Subjt:  DECMSKESNFEH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAATTATTTTCACTTCTTTCTTCAATGACTCACTTTATAGCCCAAGCATCGCTCTCGTCCTCCTCGGCTTCCTACCGGTAAAGCTCTCCCTTTTTCTCGTTCTATC
TATCTTTCTCAACGCTTGTGTTTGGATGCTTACTTTGATTTACTCTTTTCCAGTCATATCCAAACGGATAGAATCTGTTAAATTTTCCTGGTGTGCAAGCAGTTCAGTTG
TATGCGCTGCAAAGGGTCCACGGCCGAGATATCCTCGGGTCTGGAAAACCAAAAAGAGAATTGGGACCATATCCAAGGCAGCAAAGCTTGTTGATTGTATCAAGGGACTG
TCTAACGTCAAAGAGGAAGTCTATGGGGCTCTTGATTCCTTCATTGCCTGGGAACTTGAGTTTCCTCTTATTACTGTAAAGAAAGCCCTGAAGACCTTAGAGAACCAAAG
AGAATGGAAGAGGATAATTCAGTTGACGAAATGGATGTTAAGTAAAGGCCAAGGAAGAACAATGGGAAGCTATTTCACGTTATTAAATGCCTTAGCTGAAGATGGAAGAC
TTGATGAAGCTGAAGAGCTTTGGAACAAATTGTTTTCTCAGCATCTGGAGAGCATGCCTCGCTTATTCTTTCATAAAATGATATCCCTCTACTACGATCGGGCTATGCAC
AACAAGTTATTTGAGGTATTTGCTGATATGGAGGAGCTTGGAGTTCAACCAAATATGGCAATTGTCACTATGGTTGGAAATGTCTTCCACGAATTAGGCATGCTCGATAA
ATACGAAAAACTGATGAAGAAATATCCCCCACCAAAATGGGAATATCGTTACGTCAAAGGAAAGCGTGTAAGAATACGATCAAAGTATTTGTATGAAAATGGTAATTCCA
ACAATGGTTCAAGTGAGCTTGACAAAATGGAGCATAGTTCAACAAAGCCGCTGGAGGAAGCTGAAATAACCTCCGAGGATTCCAGTCTTGAAGATGATGAGGAAATGAGC
GAAGATCCAGATGAAATTCTGGATGATGAATGTATGTCGAAGGAATCCAATTTTGAGCATGATTTCATGGGGTTTGGGCAATTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGCAAATTATTTTCACTTCTTTCTTCAATGACTCACTTTATAGCCCAAGCATCGCTCTCGTCCTCCTCGGCTTCCTACCGGTAAAGCTCTCCCTTTTTCTCGTTCTATC
TATCTTTCTCAACGCTTGTGTTTGGATGCTTACTTTGATTTACTCTTTTCCAGTCATATCCAAACGGATAGAATCTGTTAAATTTTCCTGGTGTGCAAGCAGTTCAGTTG
TATGCGCTGCAAAGGGTCCACGGCCGAGATATCCTCGGGTCTGGAAAACCAAAAAGAGAATTGGGACCATATCCAAGGCAGCAAAGCTTGTTGATTGTATCAAGGGACTG
TCTAACGTCAAAGAGGAAGTCTATGGGGCTCTTGATTCCTTCATTGCCTGGGAACTTGAGTTTCCTCTTATTACTGTAAAGAAAGCCCTGAAGACCTTAGAGAACCAAAG
AGAATGGAAGAGGATAATTCAGTTGACGAAATGGATGTTAAGTAAAGGCCAAGGAAGAACAATGGGAAGCTATTTCACGTTATTAAATGCCTTAGCTGAAGATGGAAGAC
TTGATGAAGCTGAAGAGCTTTGGAACAAATTGTTTTCTCAGCATCTGGAGAGCATGCCTCGCTTATTCTTTCATAAAATGATATCCCTCTACTACGATCGGGCTATGCAC
AACAAGTTATTTGAGGTATTTGCTGATATGGAGGAGCTTGGAGTTCAACCAAATATGGCAATTGTCACTATGGTTGGAAATGTCTTCCACGAATTAGGCATGCTCGATAA
ATACGAAAAACTGATGAAGAAATATCCCCCACCAAAATGGGAATATCGTTACGTCAAAGGAAAGCGTGTAAGAATACGATCAAAGTATTTGTATGAAAATGGTAATTCCA
ACAATGGTTCAAGTGAGCTTGACAAAATGGAGCATAGTTCAACAAAGCCGCTGGAGGAAGCTGAAATAACCTCCGAGGATTCCAGTCTTGAAGATGATGAGGAAATGAGC
GAAGATCCAGATGAAATTCTGGATGATGAATGTATGTCGAAGGAATCCAATTTTGAGCATGATTTCATGGGGTTTGGGCAATTGTAAATATATATACTGTAGTTCGCAGT
TGAAGTTCGTCATAGTGTAGACTTTTATTTTTATTATTATTAGTTTGTAATTTGAACAGACGGGATGACGCATTGTGATCATAGAGCCAATTCTCTTTATTTCAGCCTTC
AGTATTATAATCCCTGATTTAACATATGGCCCAAGTTTGTGTAAACGGTGGGGATCACTTCTCTTTTTATTGACTAATTATGGTGGGTA
Protein sequenceShow/hide protein sequence
MQIIFTSFFNDSLYSPSIALVLLGFLPVKLSLFLVLSIFLNACVWMLTLIYSFPVISKRIESVKFSWCASSSVVCAAKGPRPRYPRVWKTKKRIGTISKAAKLVDCIKGL
SNVKEEVYGALDSFIAWELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQHLESMPRLFFHKMISLYYDRAMH
NKLFEVFADMEELGVQPNMAIVTMVGNVFHELGMLDKYEKLMKKYPPPKWEYRYVKGKRVRIRSKYLYENGNSNNGSSELDKMEHSSTKPLEEAEITSEDSSLEDDEEMS
EDPDEILDDECMSKESNFEHDFMGFGQL