| GenBank top hits | e value | %identity | Alignment |
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| KAA0050456.1 RNA polymerase sigma factor sigE [Cucumis melo var. makuwa] | 1.5e-256 | 87.59 | Show/hide |
Query: MGVVTVSSSAARTPLRLGAKFSNHNSTLKKPSIVAFKADKHTNTSLVSPHEQVTLPVESNNRNKKRSGKTSKPLKRVKAVFLDEATPCTLDVDYNEAAAK
MGVVTVSSSAARTP RL AKFSNH STLK+PSIVAFKADKHTNT+LVSPHEQVTLPVESNNR+KKRSG TSKPLKRVKAV +DEAT C+LD+DYNEAAAK
Subjt: MGVVTVSSSAARTPLRLGAKFSNHNSTLKKPSIVAFKADKHTNTSLVSPHEQVTLPVESNNRNKKRSGKTSKPLKRVKAVFLDEATPCTLDVDYNEAAAK
Query: LENIFKLSPVTEEDIDMESKDGRSKRGQQRRKKSDKRPSDGIVRNQTKRIKRLDLD--------------------------------------KRIALK
LENIFKLSP+T ED DMESKDGRSKRGQQR KKSDKRPSDGIVRN+TKRIKRLDLD KRIALK
Subjt: LENIFKLSPVTEEDIDMESKDGRSKRGQQRRKKSDKRPSDGIVRNQTKRIKRLDLD--------------------------------------KRIALK
Query: SNKEGKEAPSLRKQKDTKNEDDDIDGLVRDYSASTDLVSLDWKKMKIPPVLPSSEHTRLFKLLQPMKALIQVQEELQKELGREPTEGELANVTNMNVIQV
SNKEGK APSLRKQK+TKNEDD+ID LVRDYSASTDLVSLDWKKMKIPPVLPSSEHTRLFKL+QPMKALI+VQEELQKELGREPTE ELAN TNMNVIQV
Subjt: SNKEGKEAPSLRKQKDTKNEDDDIDGLVRDYSASTDLVSLDWKKMKIPPVLPSSEHTRLFKLLQPMKALIQVQEELQKELGREPTEGELANVTNMNVIQV
Query: RRQLEVGHAARNKLIKHNLRLVLFVINKYFEDFASGPKFQDLCQAGVKGLITAIDRFEPKRKFRLSTYALFWIRHAIIRSMTLSSFTRVSFGLDSVRVEI
RRQLEVG AARNKLIKHNLRLVLFVINKYFEDFA+GPKFQDLCQAGVKGLITAIDRFEPKRKFRLSTYALFWIRHAIIRSMTLSSFTRVSFGLDSVRVEI
Subjt: RRQLEVGHAARNKLIKHNLRLVLFVINKYFEDFASGPKFQDLCQAGVKGLITAIDRFEPKRKFRLSTYALFWIRHAIIRSMTLSSFTRVSFGLDSVRVEI
Query: QRAKLELLCELNRLPTEEEIIAKVGISPERYLEVMRAAKPVYSLHSRHSTTSEEFINGITDVEGTGGDNRRQPALLRLALDDVLDSLKPKESLVIRQRYG
QRAKLELLCEL+RLPTEEEIIAKVGISPERYLEVMRA KPVYSLHSRHSTTSEE INGITDVEGTGGDNRRQPALLRLALDDVLDSLKPKESLVIRQRYG
Subjt: QRAKLELLCELNRLPTEEEIIAKVGISPERYLEVMRAAKPVYSLHSRHSTTSEEFINGITDVEGTGGDNRRQPALLRLALDDVLDSLKPKESLVIRQRYG
Query: LDGKGNRTLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYLI
LDGKGNRTLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYLI
Subjt: LDGKGNRTLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYLI
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| TYK03136.1 RNA polymerase sigma factor sigE [Cucumis melo var. makuwa] | 3.4e-256 | 87.41 | Show/hide |
Query: MGVVTVSSSAARTPLRLGAKFSNHNSTLKKPSIVAFKADKHTNTSLVSPHEQVTLPVESNNRNKKRSGKTSKPLKRVKAVFLDEATPCTLDVDYNEAAAK
MGVVTVSSSAARTP RL AKFSNH STLK+PSIVAFKADKHTNT+LVSPHEQVTLPVESNNR+KKRSG TSKPLKRVKAV +DEAT C+LD+DYNEAAAK
Subjt: MGVVTVSSSAARTPLRLGAKFSNHNSTLKKPSIVAFKADKHTNTSLVSPHEQVTLPVESNNRNKKRSGKTSKPLKRVKAVFLDEATPCTLDVDYNEAAAK
Query: LENIFKLSPVTEEDIDMESKDGRSKRGQQRRKKSDKRPSDGIVRNQTKRIKRLDLD--------------------------------------KRIALK
LENIFKLSP+T ED DMESKDGRSKRGQQR K+SDKRPSDGIVRN+TKRIKRLDLD KRIALK
Subjt: LENIFKLSPVTEEDIDMESKDGRSKRGQQRRKKSDKRPSDGIVRNQTKRIKRLDLD--------------------------------------KRIALK
Query: SNKEGKEAPSLRKQKDTKNEDDDIDGLVRDYSASTDLVSLDWKKMKIPPVLPSSEHTRLFKLLQPMKALIQVQEELQKELGREPTEGELANVTNMNVIQV
SNKEGK APSLRKQK+TKNEDD+ID LVRDYSASTDLVSLDWKKMKIPPVLPSSEHTRLFKL+QPMKALI+VQEELQKELGREPTE ELAN TNMNVIQV
Subjt: SNKEGKEAPSLRKQKDTKNEDDDIDGLVRDYSASTDLVSLDWKKMKIPPVLPSSEHTRLFKLLQPMKALIQVQEELQKELGREPTEGELANVTNMNVIQV
Query: RRQLEVGHAARNKLIKHNLRLVLFVINKYFEDFASGPKFQDLCQAGVKGLITAIDRFEPKRKFRLSTYALFWIRHAIIRSMTLSSFTRVSFGLDSVRVEI
RRQLEVG AARNKLIKHNLRLVLFVINKYFEDFA+GPKFQDLCQAGVKGLITAIDRFEPKRKFRLSTYALFWIRHAIIRSMTLSSFTRVSFGLDSVRVEI
Subjt: RRQLEVGHAARNKLIKHNLRLVLFVINKYFEDFASGPKFQDLCQAGVKGLITAIDRFEPKRKFRLSTYALFWIRHAIIRSMTLSSFTRVSFGLDSVRVEI
Query: QRAKLELLCELNRLPTEEEIIAKVGISPERYLEVMRAAKPVYSLHSRHSTTSEEFINGITDVEGTGGDNRRQPALLRLALDDVLDSLKPKESLVIRQRYG
QRAKLELLCEL+RLPTEEEIIAKVGISPERYLEVMRA KPVYSLHSRHSTTSEE INGITDVEGTGGDNRRQPALLRLALDDVLDSLKPKESLVIRQRYG
Subjt: QRAKLELLCELNRLPTEEEIIAKVGISPERYLEVMRAAKPVYSLHSRHSTTSEEFINGITDVEGTGGDNRRQPALLRLALDDVLDSLKPKESLVIRQRYG
Query: LDGKGNRTLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYLI
LDGKGNRTLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYLI
Subjt: LDGKGNRTLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYLI
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| XP_008465379.1 PREDICTED: RNA polymerase sigma factor sigE, chloroplastic/mitochondrial [Cucumis melo] | 1.1e-254 | 91.6 | Show/hide |
Query: MGVVTVSSSAARTPLRLGAKFSNHNSTLKKPSIVAFKADKHTNTSLVSPHEQVTLPVESNNRNKKRSGKTSKPLKRVKAVFLDEATPCTLDVDYNEAAAK
MGVVTVSSSAARTP RL AKFSNH STLK+PSIVAFKADKHTNT+LVSPHEQVTLPVESNNR+KKRSG TSKPLKRVKAV +DEAT C+LD+DYNEAAAK
Subjt: MGVVTVSSSAARTPLRLGAKFSNHNSTLKKPSIVAFKADKHTNTSLVSPHEQVTLPVESNNRNKKRSGKTSKPLKRVKAVFLDEATPCTLDVDYNEAAAK
Query: LENIFKLSPVTEEDIDMESKDGRSKRGQQRRKKSDKRPSDGIVRNQTKRIKRLDLDKRIALKSNK--EGKEAPSLRKQKDTKNEDDDIDGLVRDYSASTD
LENIFKLSP+T ED DMESKDGRSKRGQQR KKSDKRPSDGIVRN+TKRIKRLDLDKRIALK+ + E K +++ K+TKNEDD+ID LVRDYSASTD
Subjt: LENIFKLSPVTEEDIDMESKDGRSKRGQQRRKKSDKRPSDGIVRNQTKRIKRLDLDKRIALKSNK--EGKEAPSLRKQKDTKNEDDDIDGLVRDYSASTD
Query: LVSLDWKKMKIPPVLPSSEHTRLFKLLQPMKALIQVQEELQKELGREPTEGELANVTNMNVIQVRRQLEVGHAARNKLIKHNLRLVLFVINKYFEDFASG
LVSLDWKKMKIPPVLPSSEHTRLFKL+QPMKALI+VQEELQKELGREPTE ELAN TNMNVIQVRRQLEVG AARNKLIKHNLRLVLFVINKYFEDFA+G
Subjt: LVSLDWKKMKIPPVLPSSEHTRLFKLLQPMKALIQVQEELQKELGREPTEGELANVTNMNVIQVRRQLEVGHAARNKLIKHNLRLVLFVINKYFEDFASG
Query: PKFQDLCQAGVKGLITAIDRFEPKRKFRLSTYALFWIRHAIIRSMTLSSFTRVSFGLDSVRVEIQRAKLELLCELNRLPTEEEIIAKVGISPERYLEVMR
PKFQDLCQAGVKGLITAIDRFEPKRKFRLSTYALFWIRHAIIRSMTLSSFTRVSFGLDSVRVEIQRAKLELLCEL+RLPTEEEIIAKVGISPERYLEVMR
Subjt: PKFQDLCQAGVKGLITAIDRFEPKRKFRLSTYALFWIRHAIIRSMTLSSFTRVSFGLDSVRVEIQRAKLELLCELNRLPTEEEIIAKVGISPERYLEVMR
Query: AAKPVYSLHSRHSTTSEEFINGITDVEGTGGDNRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGNRTLGEIAGNLNISREMVRKHEVKALMKLKH
A KPVYSLHSRHSTTSEE INGITDVEGTGGDNRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGNRTLGEIAGNLNISREMVRKHEVKALMKLKH
Subjt: AAKPVYSLHSRHSTTSEEFINGITDVEGTGGDNRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGNRTLGEIAGNLNISREMVRKHEVKALMKLKH
Query: PARVDYLRRYLI
PARVDYLRRYLI
Subjt: PARVDYLRRYLI
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| XP_022140941.1 RNA polymerase sigma factor sigE, chloroplastic/mitochondrial [Momordica charantia] | 5.3e-257 | 91.96 | Show/hide |
Query: MGVVTVSSSAARTPLRLGAKFSNHNSTLKKPSIVAFKADKHTNTSLVSPHEQVTLPVESNNRNKKRSGKTSKPLKRVKAVFLDEATPCTLDVDYNEAAAK
MGVVTVSSSAARTPLRLGAKFSNHNSTLK+P+IVAFKADKHTNT+LVSPHEQVTLPVESNNR KKRSGKTSK LKRVKAVF DEA+PCT +VDYNEAAAK
Subjt: MGVVTVSSSAARTPLRLGAKFSNHNSTLKKPSIVAFKADKHTNTSLVSPHEQVTLPVESNNRNKKRSGKTSKPLKRVKAVFLDEATPCTLDVDYNEAAAK
Query: LENIFKLSPVTEEDIDMESKDGRSKRGQQRRKKSDKRPSDGIVRNQTKRIKRLDLDKRIALKSNKEGKEAPSLRKQKDTKNEDDDIDGLVRDYSASTDLV
LENIF LSP+T +D D+ESKDGR + GQQRRKKSDKR DGI+RNQTKRIKRLDLDKRIALK+NKE K APSL+KQK+TKNE D+ID LVRDYSASTDLV
Subjt: LENIFKLSPVTEEDIDMESKDGRSKRGQQRRKKSDKRPSDGIVRNQTKRIKRLDLDKRIALKSNKEGKEAPSLRKQKDTKNEDDDIDGLVRDYSASTDLV
Query: SLDWKKMKIPPVLPSSEHTRLFKLLQPMKALIQVQEELQKELGREPTEGELANVTNMNVIQVRRQLEVGHAARNKLIKHNLRLVLFVINKYFEDFASGPK
SLDWKKMKIPPVLPSSEHTRLFKL+QPMKALIQVQE+LQKELGREPTEGELAN TNMNV+QVRRQLEVG AARNKLIKHNLRLVLFVINKYFEDFASGPK
Subjt: SLDWKKMKIPPVLPSSEHTRLFKLLQPMKALIQVQEELQKELGREPTEGELANVTNMNVIQVRRQLEVGHAARNKLIKHNLRLVLFVINKYFEDFASGPK
Query: FQDLCQAGVKGLITAIDRFEPKRKFRLSTYALFWIRHAIIRSMTLSSFTRVSFGLDSVRVEIQRAKLELLCELNRLPTEEEIIAKVGISPERYLEVMRAA
FQDLCQAGVKGLITAIDRFEPKR+FRLSTYALFWIRHAIIRSMTLSSFTRVSFGLDSVRVEIQRAKLELL EL+RLPTEEEI+AKVGISPERYLEVMRA
Subjt: FQDLCQAGVKGLITAIDRFEPKRKFRLSTYALFWIRHAIIRSMTLSSFTRVSFGLDSVRVEIQRAKLELLCELNRLPTEEEIIAKVGISPERYLEVMRAA
Query: KPVYSLHSRHSTTSEEFINGITDVEGTGGDNRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGNRTLGEIAGNLNISREMVRKHEVKALMKLKHPA
KPVYSLHSRH+TTSEEFINGITDVEG GGDNRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGNRTLGEIAGNLNISREMVRKHEVKALMKLKHPA
Subjt: KPVYSLHSRHSTTSEEFINGITDVEGTGGDNRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGNRTLGEIAGNLNISREMVRKHEVKALMKLKHPA
Query: RVDYLRRYLI
RVDYLRRYLI
Subjt: RVDYLRRYLI
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| XP_038903010.1 RNA polymerase sigma factor sigE, chloroplastic/mitochondrial [Benincasa hispida] | 1.6e-266 | 95.49 | Show/hide |
Query: MGVVTVSSSAARTPLRLGAKFSNHNSTLKKPSIVAFKADKHTNTSLVSPHEQVTLPVESNNRNKKRSGKTSKPLKRVKAVFLDEATPCTLDVDYNEAAAK
MGVVTVSSSAAR+P RLGAKF+NHNSTLK+PSIVAFKADKHTNT+LVSPHEQVTLPVESNN NKKRSGKTSKPLKRVKAV +DEATPCTLDVDYNEAAAK
Subjt: MGVVTVSSSAARTPLRLGAKFSNHNSTLKKPSIVAFKADKHTNTSLVSPHEQVTLPVESNNRNKKRSGKTSKPLKRVKAVFLDEATPCTLDVDYNEAAAK
Query: LENIFKLSPVTEEDIDMESKDGRSKRGQQRRKKSDKRPSDGIVRNQTKRIKRLDLDKRIALKSNKEGKEAPSLRKQKDTKNEDDDIDGLVRDYSASTDLV
LENIFKLSPVT ED DMESKDGRSKRGQQRRKKSDKR SDGIVRNQTKRIKRLDLDKRIAL+SNKEGK APSLRKQKDTKNEDD+ID LVRDYSASTDLV
Subjt: LENIFKLSPVTEEDIDMESKDGRSKRGQQRRKKSDKRPSDGIVRNQTKRIKRLDLDKRIALKSNKEGKEAPSLRKQKDTKNEDDDIDGLVRDYSASTDLV
Query: SLDWKKMKIPPVLPSSEHTRLFKLLQPMKALIQVQEELQKELGREPTEGELANVTNMNVIQVRRQLEVGHAARNKLIKHNLRLVLFVINKYFEDFASGPK
SLDWKKMKIPPVLPSSEHTRLFKL+QPMKALIQVQEELQKELGREPTEGELANVTNMNVIQVRRQLEVG AARNKLIKHNLRLVLFVINKYFEDFASGPK
Subjt: SLDWKKMKIPPVLPSSEHTRLFKLLQPMKALIQVQEELQKELGREPTEGELANVTNMNVIQVRRQLEVGHAARNKLIKHNLRLVLFVINKYFEDFASGPK
Query: FQDLCQAGVKGLITAIDRFEPKRKFRLSTYALFWIRHAIIRSMTLSSFTRVSFGLDSVRVEIQRAKLELLCELNRLPTEEEIIAKVGISPERYLEVMRAA
FQDLCQAGVKGLITAIDRFEPKRKFRLSTYALFWIRHAIIRSMTLSSFTRVSFGLDSVRVEIQ+AKLEL CEL+RLPTEEEIIAKVGISPERYLEVMRA
Subjt: FQDLCQAGVKGLITAIDRFEPKRKFRLSTYALFWIRHAIIRSMTLSSFTRVSFGLDSVRVEIQRAKLELLCELNRLPTEEEIIAKVGISPERYLEVMRAA
Query: KPVYSLHSRHSTTSEEFINGITDVEGTGGDNRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGNRTLGEIAGNLNISREMVRKHEVKALMKLKHPA
KPVYSLHS+HSTTSEEFINGITDVEGTGGDNRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGNRTLGEIAGNLNISREMVRKHEVKALMKLKHPA
Subjt: KPVYSLHSRHSTTSEEFINGITDVEGTGGDNRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGNRTLGEIAGNLNISREMVRKHEVKALMKLKHPA
Query: RVDYLRRYLI
RVDYLRRYL+
Subjt: RVDYLRRYLI
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| TrEMBL top hits | e value | %identity | Alignment |
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| A0A1S3CQ87 RNA polymerase sigma factor sigE, chloroplastic/mitochondrial | 5.4e-255 | 91.6 | Show/hide |
Query: MGVVTVSSSAARTPLRLGAKFSNHNSTLKKPSIVAFKADKHTNTSLVSPHEQVTLPVESNNRNKKRSGKTSKPLKRVKAVFLDEATPCTLDVDYNEAAAK
MGVVTVSSSAARTP RL AKFSNH STLK+PSIVAFKADKHTNT+LVSPHEQVTLPVESNNR+KKRSG TSKPLKRVKAV +DEAT C+LD+DYNEAAAK
Subjt: MGVVTVSSSAARTPLRLGAKFSNHNSTLKKPSIVAFKADKHTNTSLVSPHEQVTLPVESNNRNKKRSGKTSKPLKRVKAVFLDEATPCTLDVDYNEAAAK
Query: LENIFKLSPVTEEDIDMESKDGRSKRGQQRRKKSDKRPSDGIVRNQTKRIKRLDLDKRIALKSNK--EGKEAPSLRKQKDTKNEDDDIDGLVRDYSASTD
LENIFKLSP+T ED DMESKDGRSKRGQQR KKSDKRPSDGIVRN+TKRIKRLDLDKRIALK+ + E K +++ K+TKNEDD+ID LVRDYSASTD
Subjt: LENIFKLSPVTEEDIDMESKDGRSKRGQQRRKKSDKRPSDGIVRNQTKRIKRLDLDKRIALKSNK--EGKEAPSLRKQKDTKNEDDDIDGLVRDYSASTD
Query: LVSLDWKKMKIPPVLPSSEHTRLFKLLQPMKALIQVQEELQKELGREPTEGELANVTNMNVIQVRRQLEVGHAARNKLIKHNLRLVLFVINKYFEDFASG
LVSLDWKKMKIPPVLPSSEHTRLFKL+QPMKALI+VQEELQKELGREPTE ELAN TNMNVIQVRRQLEVG AARNKLIKHNLRLVLFVINKYFEDFA+G
Subjt: LVSLDWKKMKIPPVLPSSEHTRLFKLLQPMKALIQVQEELQKELGREPTEGELANVTNMNVIQVRRQLEVGHAARNKLIKHNLRLVLFVINKYFEDFASG
Query: PKFQDLCQAGVKGLITAIDRFEPKRKFRLSTYALFWIRHAIIRSMTLSSFTRVSFGLDSVRVEIQRAKLELLCELNRLPTEEEIIAKVGISPERYLEVMR
PKFQDLCQAGVKGLITAIDRFEPKRKFRLSTYALFWIRHAIIRSMTLSSFTRVSFGLDSVRVEIQRAKLELLCEL+RLPTEEEIIAKVGISPERYLEVMR
Subjt: PKFQDLCQAGVKGLITAIDRFEPKRKFRLSTYALFWIRHAIIRSMTLSSFTRVSFGLDSVRVEIQRAKLELLCELNRLPTEEEIIAKVGISPERYLEVMR
Query: AAKPVYSLHSRHSTTSEEFINGITDVEGTGGDNRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGNRTLGEIAGNLNISREMVRKHEVKALMKLKH
A KPVYSLHSRHSTTSEE INGITDVEGTGGDNRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGNRTLGEIAGNLNISREMVRKHEVKALMKLKH
Subjt: AAKPVYSLHSRHSTTSEEFINGITDVEGTGGDNRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGNRTLGEIAGNLNISREMVRKHEVKALMKLKH
Query: PARVDYLRRYLI
PARVDYLRRYLI
Subjt: PARVDYLRRYLI
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| A0A5A7U8E5 RNA polymerase sigma factor sigE | 7.5e-257 | 87.59 | Show/hide |
Query: MGVVTVSSSAARTPLRLGAKFSNHNSTLKKPSIVAFKADKHTNTSLVSPHEQVTLPVESNNRNKKRSGKTSKPLKRVKAVFLDEATPCTLDVDYNEAAAK
MGVVTVSSSAARTP RL AKFSNH STLK+PSIVAFKADKHTNT+LVSPHEQVTLPVESNNR+KKRSG TSKPLKRVKAV +DEAT C+LD+DYNEAAAK
Subjt: MGVVTVSSSAARTPLRLGAKFSNHNSTLKKPSIVAFKADKHTNTSLVSPHEQVTLPVESNNRNKKRSGKTSKPLKRVKAVFLDEATPCTLDVDYNEAAAK
Query: LENIFKLSPVTEEDIDMESKDGRSKRGQQRRKKSDKRPSDGIVRNQTKRIKRLDLD--------------------------------------KRIALK
LENIFKLSP+T ED DMESKDGRSKRGQQR KKSDKRPSDGIVRN+TKRIKRLDLD KRIALK
Subjt: LENIFKLSPVTEEDIDMESKDGRSKRGQQRRKKSDKRPSDGIVRNQTKRIKRLDLD--------------------------------------KRIALK
Query: SNKEGKEAPSLRKQKDTKNEDDDIDGLVRDYSASTDLVSLDWKKMKIPPVLPSSEHTRLFKLLQPMKALIQVQEELQKELGREPTEGELANVTNMNVIQV
SNKEGK APSLRKQK+TKNEDD+ID LVRDYSASTDLVSLDWKKMKIPPVLPSSEHTRLFKL+QPMKALI+VQEELQKELGREPTE ELAN TNMNVIQV
Subjt: SNKEGKEAPSLRKQKDTKNEDDDIDGLVRDYSASTDLVSLDWKKMKIPPVLPSSEHTRLFKLLQPMKALIQVQEELQKELGREPTEGELANVTNMNVIQV
Query: RRQLEVGHAARNKLIKHNLRLVLFVINKYFEDFASGPKFQDLCQAGVKGLITAIDRFEPKRKFRLSTYALFWIRHAIIRSMTLSSFTRVSFGLDSVRVEI
RRQLEVG AARNKLIKHNLRLVLFVINKYFEDFA+GPKFQDLCQAGVKGLITAIDRFEPKRKFRLSTYALFWIRHAIIRSMTLSSFTRVSFGLDSVRVEI
Subjt: RRQLEVGHAARNKLIKHNLRLVLFVINKYFEDFASGPKFQDLCQAGVKGLITAIDRFEPKRKFRLSTYALFWIRHAIIRSMTLSSFTRVSFGLDSVRVEI
Query: QRAKLELLCELNRLPTEEEIIAKVGISPERYLEVMRAAKPVYSLHSRHSTTSEEFINGITDVEGTGGDNRRQPALLRLALDDVLDSLKPKESLVIRQRYG
QRAKLELLCEL+RLPTEEEIIAKVGISPERYLEVMRA KPVYSLHSRHSTTSEE INGITDVEGTGGDNRRQPALLRLALDDVLDSLKPKESLVIRQRYG
Subjt: QRAKLELLCELNRLPTEEEIIAKVGISPERYLEVMRAAKPVYSLHSRHSTTSEEFINGITDVEGTGGDNRRQPALLRLALDDVLDSLKPKESLVIRQRYG
Query: LDGKGNRTLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYLI
LDGKGNRTLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYLI
Subjt: LDGKGNRTLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYLI
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| A0A5D3BY73 RNA polymerase sigma factor sigE | 1.7e-256 | 87.41 | Show/hide |
Query: MGVVTVSSSAARTPLRLGAKFSNHNSTLKKPSIVAFKADKHTNTSLVSPHEQVTLPVESNNRNKKRSGKTSKPLKRVKAVFLDEATPCTLDVDYNEAAAK
MGVVTVSSSAARTP RL AKFSNH STLK+PSIVAFKADKHTNT+LVSPHEQVTLPVESNNR+KKRSG TSKPLKRVKAV +DEAT C+LD+DYNEAAAK
Subjt: MGVVTVSSSAARTPLRLGAKFSNHNSTLKKPSIVAFKADKHTNTSLVSPHEQVTLPVESNNRNKKRSGKTSKPLKRVKAVFLDEATPCTLDVDYNEAAAK
Query: LENIFKLSPVTEEDIDMESKDGRSKRGQQRRKKSDKRPSDGIVRNQTKRIKRLDLD--------------------------------------KRIALK
LENIFKLSP+T ED DMESKDGRSKRGQQR K+SDKRPSDGIVRN+TKRIKRLDLD KRIALK
Subjt: LENIFKLSPVTEEDIDMESKDGRSKRGQQRRKKSDKRPSDGIVRNQTKRIKRLDLD--------------------------------------KRIALK
Query: SNKEGKEAPSLRKQKDTKNEDDDIDGLVRDYSASTDLVSLDWKKMKIPPVLPSSEHTRLFKLLQPMKALIQVQEELQKELGREPTEGELANVTNMNVIQV
SNKEGK APSLRKQK+TKNEDD+ID LVRDYSASTDLVSLDWKKMKIPPVLPSSEHTRLFKL+QPMKALI+VQEELQKELGREPTE ELAN TNMNVIQV
Subjt: SNKEGKEAPSLRKQKDTKNEDDDIDGLVRDYSASTDLVSLDWKKMKIPPVLPSSEHTRLFKLLQPMKALIQVQEELQKELGREPTEGELANVTNMNVIQV
Query: RRQLEVGHAARNKLIKHNLRLVLFVINKYFEDFASGPKFQDLCQAGVKGLITAIDRFEPKRKFRLSTYALFWIRHAIIRSMTLSSFTRVSFGLDSVRVEI
RRQLEVG AARNKLIKHNLRLVLFVINKYFEDFA+GPKFQDLCQAGVKGLITAIDRFEPKRKFRLSTYALFWIRHAIIRSMTLSSFTRVSFGLDSVRVEI
Subjt: RRQLEVGHAARNKLIKHNLRLVLFVINKYFEDFASGPKFQDLCQAGVKGLITAIDRFEPKRKFRLSTYALFWIRHAIIRSMTLSSFTRVSFGLDSVRVEI
Query: QRAKLELLCELNRLPTEEEIIAKVGISPERYLEVMRAAKPVYSLHSRHSTTSEEFINGITDVEGTGGDNRRQPALLRLALDDVLDSLKPKESLVIRQRYG
QRAKLELLCEL+RLPTEEEIIAKVGISPERYLEVMRA KPVYSLHSRHSTTSEE INGITDVEGTGGDNRRQPALLRLALDDVLDSLKPKESLVIRQRYG
Subjt: QRAKLELLCELNRLPTEEEIIAKVGISPERYLEVMRAAKPVYSLHSRHSTTSEEFINGITDVEGTGGDNRRQPALLRLALDDVLDSLKPKESLVIRQRYG
Query: LDGKGNRTLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYLI
LDGKGNRTLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYLI
Subjt: LDGKGNRTLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYLI
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| A0A6J1CHI4 RNA polymerase sigma factor sigE, chloroplastic/mitochondrial | 2.6e-257 | 91.96 | Show/hide |
Query: MGVVTVSSSAARTPLRLGAKFSNHNSTLKKPSIVAFKADKHTNTSLVSPHEQVTLPVESNNRNKKRSGKTSKPLKRVKAVFLDEATPCTLDVDYNEAAAK
MGVVTVSSSAARTPLRLGAKFSNHNSTLK+P+IVAFKADKHTNT+LVSPHEQVTLPVESNNR KKRSGKTSK LKRVKAVF DEA+PCT +VDYNEAAAK
Subjt: MGVVTVSSSAARTPLRLGAKFSNHNSTLKKPSIVAFKADKHTNTSLVSPHEQVTLPVESNNRNKKRSGKTSKPLKRVKAVFLDEATPCTLDVDYNEAAAK
Query: LENIFKLSPVTEEDIDMESKDGRSKRGQQRRKKSDKRPSDGIVRNQTKRIKRLDLDKRIALKSNKEGKEAPSLRKQKDTKNEDDDIDGLVRDYSASTDLV
LENIF LSP+T +D D+ESKDGR + GQQRRKKSDKR DGI+RNQTKRIKRLDLDKRIALK+NKE K APSL+KQK+TKNE D+ID LVRDYSASTDLV
Subjt: LENIFKLSPVTEEDIDMESKDGRSKRGQQRRKKSDKRPSDGIVRNQTKRIKRLDLDKRIALKSNKEGKEAPSLRKQKDTKNEDDDIDGLVRDYSASTDLV
Query: SLDWKKMKIPPVLPSSEHTRLFKLLQPMKALIQVQEELQKELGREPTEGELANVTNMNVIQVRRQLEVGHAARNKLIKHNLRLVLFVINKYFEDFASGPK
SLDWKKMKIPPVLPSSEHTRLFKL+QPMKALIQVQE+LQKELGREPTEGELAN TNMNV+QVRRQLEVG AARNKLIKHNLRLVLFVINKYFEDFASGPK
Subjt: SLDWKKMKIPPVLPSSEHTRLFKLLQPMKALIQVQEELQKELGREPTEGELANVTNMNVIQVRRQLEVGHAARNKLIKHNLRLVLFVINKYFEDFASGPK
Query: FQDLCQAGVKGLITAIDRFEPKRKFRLSTYALFWIRHAIIRSMTLSSFTRVSFGLDSVRVEIQRAKLELLCELNRLPTEEEIIAKVGISPERYLEVMRAA
FQDLCQAGVKGLITAIDRFEPKR+FRLSTYALFWIRHAIIRSMTLSSFTRVSFGLDSVRVEIQRAKLELL EL+RLPTEEEI+AKVGISPERYLEVMRA
Subjt: FQDLCQAGVKGLITAIDRFEPKRKFRLSTYALFWIRHAIIRSMTLSSFTRVSFGLDSVRVEIQRAKLELLCELNRLPTEEEIIAKVGISPERYLEVMRAA
Query: KPVYSLHSRHSTTSEEFINGITDVEGTGGDNRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGNRTLGEIAGNLNISREMVRKHEVKALMKLKHPA
KPVYSLHSRH+TTSEEFINGITDVEG GGDNRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGNRTLGEIAGNLNISREMVRKHEVKALMKLKHPA
Subjt: KPVYSLHSRHSTTSEEFINGITDVEGTGGDNRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGNRTLGEIAGNLNISREMVRKHEVKALMKLKHPA
Query: RVDYLRRYLI
RVDYLRRYLI
Subjt: RVDYLRRYLI
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| A0A6J1E518 RNA polymerase sigma factor sigE, chloroplastic/mitochondrial-like isoform X2 | 9.1e-255 | 91.57 | Show/hide |
Query: MGVVTVSSSAARTPLRLGAKFSNHNSTLKKPSIVAFKADKHTNTSLVSPHEQVTLPVESNNRNKKRSGKTSKPLKRVKAVFLDEATPCTLDVDYNEAAAK
MGVVTVSSSAARTP RLG KFSN+ S LK+PSIVAFK DKHTNT+LVSPHEQVTLPVESNNRN+KR+GK+SK LKRVKAV +DEATPCT DVDYNEAAAK
Subjt: MGVVTVSSSAARTPLRLGAKFSNHNSTLKKPSIVAFKADKHTNTSLVSPHEQVTLPVESNNRNKKRSGKTSKPLKRVKAVFLDEATPCTLDVDYNEAAAK
Query: LENIFKLSPVTEEDIDMESKDGRSKRGQQRRKKSDKRPSDGIVRNQTKRIKRLDLDKRIALKSNKEGKEAPSLRKQKDTKNEDDDIDGLVRDYSASTDLV
LENIFKLSPVT ED DME++DGR KRGQQRRKK KRP DG+VRNQTKRIKRLDLDKRIALKSNKEGK APSL KQKDTK+E D+ID LVR+YSASTDLV
Subjt: LENIFKLSPVTEEDIDMESKDGRSKRGQQRRKKSDKRPSDGIVRNQTKRIKRLDLDKRIALKSNKEGKEAPSLRKQKDTKNEDDDIDGLVRDYSASTDLV
Query: SLDWKKMKIPPVLPSSEHTRLFKLLQPMKALIQVQEELQKELGREPTEGELANVTNMNVIQVRRQLEVGHAARNKLIKHNLRLVLFVINKYFEDFASGPK
SLDWKKMKIPPVLPSSEHTRLFKL+QPMKALIQ QEELQK LGREPTEGELAN TNMNVIQVRRQLEVG AARNKLIKHNLRLVLFVINKYFEDFASGPK
Subjt: SLDWKKMKIPPVLPSSEHTRLFKLLQPMKALIQVQEELQKELGREPTEGELANVTNMNVIQVRRQLEVGHAARNKLIKHNLRLVLFVINKYFEDFASGPK
Query: FQDLCQAGVKGLITAIDRFEPKRKFRLSTYALFWIRHAIIRSMTLSSFTRVSFGLDSVRVEIQRAKLELLCELNRLPTEEEIIAKVGISPERYLEVMRAA
FQDLCQAGVKGLITAIDRFEPKR+FRLSTYALFWIRHAIIRSMTLSSFTRVSFGLDSVRVEIQRAKLELLCEL+RLPTEEE+IAKVGISPERYLEVMRA
Subjt: FQDLCQAGVKGLITAIDRFEPKRKFRLSTYALFWIRHAIIRSMTLSSFTRVSFGLDSVRVEIQRAKLELLCELNRLPTEEEIIAKVGISPERYLEVMRAA
Query: KPVYSLHSRHSTTSEEFINGITDVEGTGGDNRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGNRTLGEIAGNLNISREMVRKHEVKALMKLKHPA
KPVYSLHSRHSTTSEEFI+GI DVEGTGGDNRRQ ALLRLALDDVLDSLKPKESLVIRQRYGLDGKGNRTLGEIAGNLNISREMVRKHEVKALMKLKHPA
Subjt: KPVYSLHSRHSTTSEEFINGITDVEGTGGDNRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGNRTLGEIAGNLNISREMVRKHEVKALMKLKHPA
Query: RVDYLRRYLI
RVDYLRRYLI
Subjt: RVDYLRRYLI
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| SwissProt top hits | e value | %identity | Alignment |
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| P26683 RNA polymerase sigma factor SigA | 2.7e-38 | 32.08 | Show/hide |
Query: KEGKEAPSLRKQKDTKNEDDDIDGLVRDYSASTDLVSLDWKKMKIPPVLPSSEHTRLFKLLQPMKALIQVQEELQKELGREPTEGELANVTNMNVIQVRR
K GK A S R+ + K + D + L +++ +L + E L + + + L +V+E L ++L R+P + E A + + R
Subjt: KEGKEAPSLRKQKDTKNEDDDIDGLVRDYSASTDLVSLDWKKMKIPPVLPSSEHTRLFKLLQPMKALIQVQEELQKELGREPTEGELANVTNMNVIQVRR
Query: QLEVGHAARNKLIKHNLRLVLFVINKYFEDFASGPKFQDLCQAGVKGLITAIDRFEPKRKFRLSTYALFWIRHAIIRSMTLSSFT-RVSFGLDSVRVEIQ
+L +G A++K+++ NLRLV+ + KY G FQDL Q G GLI A ++F+ ++ ++ STYA +WIR AI R++ S T R+ L I+
Subjt: QLEVGHAARNKLIKHNLRLVLFVINKYFEDFASGPKFQDLCQAGVKGLITAIDRFEPKRKFRLSTYALFWIRHAIIRSMTLSSFT-RVSFGLDSVRVEIQ
Query: RAKLELLCELNRLPTEEEIIAKVGISPERYLEVMRAAKPVYSLHSRHSTTSEEFINGITDVEGTGGDNRRQPALLRLALDDVLDSLKPKESLVIRQRYGL
+ L E+ R PTEEEI ++ ++ E+ + ++A+ SL + + + + +G +++ LLR L+ VLDSL P+E V+R RYGL
Subjt: RAKLELLCELNRLPTEEEIIAKVGISPERYLEVMRAAKPVYSLHSRHSTTSEEFINGITDVEGTGGDNRRQPALLRLALDDVLDSLKPKESLVIRQRYGL
Query: DGKGNRTLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYL
D +TL EI N++RE +R+ E KAL KL+HP R L+ Y+
Subjt: DGKGNRTLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYL
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| P38023 RNA polymerase sigma factor SigA1 | 9.7e-36 | 30.79 | Show/hide |
Query: RKKSDKRPSDGIVRNQTKRIKRLDLDKRIALKSNKEGKEAPSLRKQKDTKNEDDDIDGLVRDYSASTDLVSLDWKKMKIPPVLPSSEHTRLFKLLQPMKA
++ S K+ + +V T D+D S E ++A + K K K +D +R Y + L L + E L + + + A
Subjt: RKKSDKRPSDGIVRNQTKRIKRLDLDKRIALKSNKEGKEAPSLRKQKDTKNEDDDIDGLVRDYSASTDLVSLDWKKMKIPPVLPSSEHTRLFKLLQPMKA
Query: LIQVQEELQKELGREPTEGELANVTNMNVIQVRRQLEVGHAARNKLIKHNLRLVLFVINKYFEDFASGPKFQDLCQAGVKGLITAIDRFEPKRKFRLSTY
L ++++EL ++L R P++ E A + + + RR+L G A++K+++ NLRLV+ + KY G FQDL Q G GLI A ++F+ ++ ++ STY
Subjt: LIQVQEELQKELGREPTEGELANVTNMNVIQVRRQLEVGHAARNKLIKHNLRLVLFVINKYFEDFASGPKFQDLCQAGVKGLITAIDRFEPKRKFRLSTY
Query: ALFWIRHAIIRSMTLSSFT-RVSFGLDSVRVEIQRAKLELLCELNRLPTEEEIIAKVGISPERYLEVMRAAKPVYSLHSRHSTTSEEFINGITDVEGTGG
A +WIR AI R++ S T R+ L I++ L E+ R PTEEEI ++ ++ E+ + ++A+ SL + + + + +G
Subjt: ALFWIRHAIIRSMTLSSFT-RVSFGLDSVRVEIQRAKLELLCELNRLPTEEEIIAKVGISPERYLEVMRAAKPVYSLHSRHSTTSEEFINGITDVEGTGG
Query: DNRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGNRTLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYL
++ LLR L+ VL +L P+E V+R RYGLD +TL EI N++RE +R+ E KAL KL+HP R L+ Y+
Subjt: DNRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGNRTLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYL
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| P52322 RNA polymerase sigma factor SigA | 6.9e-34 | 36.29 | Show/hide |
Query: RRQLEVGHAARNKLIKHNLRLVLFVINKYFEDFASGPKFQDLCQAGVKGLITAIDRFEPKRKFRLSTYALFWIRHAIIRSMTLSSFT-RVSFGLDSVRVE
+R+L G A+ K+++ NLRLV+ + KY G FQDL Q G GLI A ++F+ ++ ++ STYA +WIR AI R++ S T R+ L
Subjt: RRQLEVGHAARNKLIKHNLRLVLFVINKYFEDFASGPKFQDLCQAGVKGLITAIDRFEPKRKFRLSTYALFWIRHAIIRSMTLSSFT-RVSFGLDSVRVE
Query: IQRAKLELLCELNRLPTEEEIIAKVGISPERYLEVMRAAKPVYSLHSRHSTTSEEFINGITDVEGTGGDNRRQPALLRLALDDVLDSLKPKESLVIRQRY
I++ L E+ R PTEEEI K+ ++ E+ + ++A+ SL + + + + +G ++ LLR L++VLD+L P+E V+R RY
Subjt: IQRAKLELLCELNRLPTEEEIIAKVGISPERYLEVMRAAKPVYSLHSRHSTTSEEFINGITDVEGTGGDNRRQPALLRLALDDVLDSLKPKESLVIRQRY
Query: GLDGKGNRTLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYL
GLD +TL EI N++RE +R+ E KAL KL+HP R L+ Y+
Subjt: GLDGKGNRTLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYL
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| P74565 RNA polymerase sigma factor SigA | 7.2e-31 | 28.61 | Show/hide |
Query: EAAAKLENIFKLSPVTEEDIDMESKDGRSKRGQQRRKKSDKRPSDGIVRN-QTKRIKRLDLDKRIALKSNKEGKEAPSLRKQKDTKNEDDDIDGLVRDYS
E +L + ++DID+E + + + KK K D + + T+ R+ L + ++ + +E R+ D + D L
Subjt: EAAAKLENIFKLSPVTEEDIDMESKDGRSKRGQQRRKKSDKRPSDGIVRN-QTKRIKRLDLDKRIALKSNKEGKEAPSLRKQKDTKNEDDDIDGLVRDYS
Query: ASTDLVSLDWKKMKIPPVLPSSEHTRLFKLLQPMKALIQVQEELQKELGREPTEGELANVTNMNVIQVRRQLEVGHAARNKLIKHNLRLVLFVINKYFED
L+W K ++ + + + K +P K + L E E + N N RR+L + A++K+++ NLRLV+ + KY
Subjt: ASTDLVSLDWKKMKIPPVLPSSEHTRLFKLLQPMKALIQVQEELQKELGREPTEGELANVTNMNVIQVRRQLEVGHAARNKLIKHNLRLVLFVINKYFED
Query: FASGPKFQDLCQAGVKGLITAIDRFEPKRKFRLSTYALFWIRHAIIRSMTLSSFT-RVSFGLDSVRVEIQRAKLELLCELNRLPTEEEIIAKVGISPERY
G FQDL Q G GLI A ++F+ ++ ++ STYA +WIR AI R++ S T R+ L I++ L E+ R PTEEEI K+ ++ E+
Subjt: FASGPKFQDLCQAGVKGLITAIDRFEPKRKFRLSTYALFWIRHAIIRSMTLSSFT-RVSFGLDSVRVEIQRAKLELLCELNRLPTEEEIIAKVGISPERY
Query: LEVMRAAKPVYSLHSRHSTTSEEFINGITDVEGTGGDNRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGNRTLGEIAGNLNISREMVRKHEVKAL
+ ++A+ SL + + + + +G ++ LLR L++VLD+L P+E V+R RYGLD +TL EI N++RE +R+ E KAL
Subjt: LEVMRAAKPVYSLHSRHSTTSEEFINGITDVEGTGGDNRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGNRTLGEIAGNLNISREMVRKHEVKAL
Query: MKLKHPARVDYLRRYL
KL+HP R L+ Y+
Subjt: MKLKHPARVDYLRRYL
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| Q9ZNX9 RNA polymerase sigma factor sigE, chloroplastic/mitochondrial | 3.3e-177 | 65.25 | Show/hide |
Query: MGVVTVSSSAARTPLRLGAKFSNHNSTLKKPSIVAFKADKHTNTSL-VSPHEQVTLPVESNNRNKKRSGKTSKPLKRVK---AVFLDEATPCTLDVDYNE
MGVV++SSSAAR+PL LG H S+LKKPSIVAFKAD +N++L + P EQV +P E +N KKR KP K K ++ + A C+L VDYNE
Subjt: MGVVTVSSSAARTPLRLGAKFSNHNSTLKKPSIVAFKADKHTNTSL-VSPHEQVTLPVESNNRNKKRSGKTSKPLKRVK---AVFLDEATPCTLDVDYNE
Query: AAAKLENIFKLSPVTEEDIDMESKDGRSKR--GQQRRKKSDKRPSDGIVRNQTKRIKRLDLDKRIALKSNKEGKEAPSLRKQKDTK--NEDDDIDGLVRD
AAA+LE+I+KLSP T ++ + +DG SK ++R++K +VRN K+ KR+ LDKRIALK N + K + +K TK E++ I+ LVRD
Subjt: AAAKLENIFKLSPVTEEDIDMESKDGRSKR--GQQRRKKSDKRPSDGIVRNQTKRIKRLDLDKRIALKSNKEGKEAPSLRKQKDTK--NEDDDIDGLVRD
Query: YSASTDLVSLDWKKMKIPPVLPSSEHTRLFKLLQPMKALIQVQEELQKELGREPTEGELANVTNMNVIQVRRQLEVGHAARNKLIKHNLRLVLFVINKYF
YSAS D+VSLDWKKMKIPPVL S+EH LFKL+QPMKAL++V++ LQK LGREP E E+A NM +V++++E+G AARNKLIKHNLRLVLFV+NKYF
Subjt: YSASTDLVSLDWKKMKIPPVLPSSEHTRLFKLLQPMKALIQVQEELQKELGREPTEGELANVTNMNVIQVRRQLEVGHAARNKLIKHNLRLVLFVINKYF
Query: EDFASGPKFQDLCQAGVKGLITAIDRFEPKRKFRLSTYALFWIRHAIIRSMTLSSFTRVSFGLDSVRVEIQRAKLELLCELNRLPTEEEIIAKVGISPER
+F +GPKFQDLCQAG++GLITAIDRFEPKRKFRLSTY LFWIRHAIIRSMT S+FTRV FGL+SVRVEI +AK EL E+ R PTE+E++ ++ I+PER
Subjt: EDFASGPKFQDLCQAGVKGLITAIDRFEPKRKFRLSTYALFWIRHAIIRSMTLSSFTRVSFGLDSVRVEIQRAKLELLCELNRLPTEEEIIAKVGISPER
Query: YLEVMRAAKPVYSLHSRHSTTSEEFINGITDVEGTGGDNRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGNRTLGEIAGNLNISREMVRKHEVKA
Y EV+RAAKPV SL+S+HS T EEFINGITDV+G G +N RQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKG+RTLGEIAGNLNISREMVRKHEVKA
Subjt: YLEVMRAAKPVYSLHSRHSTTSEEFINGITDVEGTGGDNRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGNRTLGEIAGNLNISREMVRKHEVKA
Query: LMKLKHPARVDYLRRYLI
LMKLKH ARVDYLR+Y++
Subjt: LMKLKHPARVDYLRRYLI
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT1G08540.1 RNApolymerase sigma subunit 2 | 5.6e-31 | 27.63 | Show/hide |
Query: VTEEDIDMESKDGRSKRGQQRRKKSDKRPSDGIVRNQTKRIKRLDLDKRIALKSNKEG----KEAPSLRKQKDTKNEDDDIDGL--VRDYSASTDLVSLD
+T + ES Q+ + +++PS + T++ +R + L+ G K S +K++ E D D L +R ++S+ L+++
Subjt: VTEEDIDMESKDGRSKRGQQRRKKSDKRPSDGIVRNQTKRIKRLDLDKRIALKSNKEG----KEAPSLRKQKDTKNEDDDIDGL--VRDYSASTDLVSLD
Query: WKKMKIPPVLPSSEHTRLFKLLQPMKALIQVQEELQKELGREPTEGELANVTNMNVIQVRRQLEVGHAARNKLIKHNLRLVLFVINKYFEDFASGPKFQD
E L +Q + L ++Q EL + GR+PT + A+ ++ +R+++ G ++K+IK N+RLV+ + Y +G QD
Subjt: WKKMKIPPVLPSSEHTRLFKLLQPMKALIQVQEELQKELGREPTEGELANVTNMNVIQVRRQLEVGHAARNKLIKHNLRLVLFVINKYFEDFASGPKFQD
Query: LCQAGVKGLITAIDRFEPKRKFRLSTYALFWIRHAIIRSMT-LSSFTRVSFGLDSVRVEIQRAKLELLCELNRLPTEEEIIAKVGISPERYLEVMRAAKP
L Q G +GL+ ++F+ + F+ STYA +WI+ A+ +S++ S R+ F + ++ A+ +L E + P EEI G+S +R + V+ + KP
Subjt: LCQAGVKGLITAIDRFEPKRKFRLSTYALFWIRHAIIRSMT-LSSFTRVSFGLDSVRVEIQRAKLELLCELNRLPTEEEIIAKVGISPERYLEVMRAAKP
Query: VYSLHSRHSTTSE-EFINGITDVEGTGGDNRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGNRTLGEIAGNLNISREMVRKHEVKALMKLKHPAR
SL + + I D E ++ +R LD VLDSL +E VIR R+G++ +TL EI + +SRE VR+ E A KLK+ R
Subjt: VYSLHSRHSTTSE-EFINGITDVEGTGGDNRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGNRTLGEIAGNLNISREMVRKHEVKALMKLKHPAR
Query: VDYLRRYLI
++L++YL+
Subjt: VDYLRRYLI
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| AT1G64860.1 sigma factor A | 3.1e-21 | 31.1 | Show/hide |
Query: VLPSSEHTRLFKLLQPMKALIQVQEELQKELGREPTEGELANVTNMNVIQVRRQLEVGHAARNKLIKHNLRLVLFVINKYFEDFASGPKFQDLCQAGVKG
VL E RL K ++ L + L+ LG EP++ +LA ++ +++ L H AR KL N+RLV+ + +Y G + DL Q G+ G
Subjt: VLPSSEHTRLFKLLQPMKALIQVQEELQKELGREPTEGELANVTNMNVIQVRRQLEVGHAARNKLIKHNLRLVLFVINKYFEDFASGPKFQDLCQAGVKG
Query: LITAIDRFEPKRKFRLSTYALFWIRHAIIRSMTLSSFT-RVSFGLDSVRVEIQRAKLELLCELNRLPTEEEIIAKVGISPERYLEVMRAAKPVYSLHSRH
L+ I++F+ + FR+STY +WIR + R++ +S T R+ L I+ AKL L E P+ + I + +S ++ A V+SL R
Subjt: LITAIDRFEPKRKFRLSTYALFWIRHAIIRSMTLSSFT-RVSFGLDSVRVEIQRAKLELLCELNRLPTEEEIIAKVGISPERYLEVMRAAKPVYSLHSRH
Query: STTSEEFINGITD---VEGTGGDNRRQPALLRLALDD-----VLDSLKPKESLVIRQRYGLDGKGNRTLGEIAGNLNISREMVRKHEVKALMKLKHPAR
+ S + G T + T +N LAL + + +L +E +IR YGLD K T +I+ + +SRE VR+ + AL KLKH AR
Subjt: STTSEEFINGITD---VEGTGGDNRRQPALLRLALDD-----VLDSLKPKESLVIRQRYGLDGKGNRTLGEIAGNLNISREMVRKHEVKALMKLKHPAR
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| AT2G36990.1 RNApolymerase sigma-subunit F | 3.5e-25 | 27.64 | Show/hide |
Query: DMESKDGRSKRGQQRRKKSDKRPSDGIVRNQTKRIKRLDLDKRIALKSNKEGKEAPSLRKQKDTKNEDDDIDGLVRDYSASTDLVSLDWKKMKIPPVLPS
D E+ + + S P G + ++++R ++R A KSN E +K K D + D + L + +L +
Subjt: DMESKDGRSKRGQQRRKKSDKRPSDGIVRNQTKRIKRLDLDKRIALKSNKEGKEAPSLRKQKDTKNEDDDIDGLVRDYSASTDLVSLDWKKMKIPPVLPS
Query: SEHTRLFKLLQPMKALIQVQEELQKELGREPTEGELANVTNMNVIQVRRQLEVGHAARNKLIKHNLRLVLFVINKYFEDFASGPKFQDLCQAGVKGLITA
E L +Q + L +V+ +L+ + G EPT GE A ++ ++ + G ++R KLI NLRLV+ + +Y G FQDL Q G GL+ +
Subjt: SEHTRLFKLLQPMKALIQVQEELQKELGREPTEGELANVTNMNVIQVRRQLEVGHAARNKLIKHNLRLVLFVINKYFEDFASGPKFQDLCQAGVKGLITA
Query: IDRFEPKRKFRLSTYALFWIRHAIIRSMTLSSFT-RVSFGLDSVRVEIQRAKLELLCELNRLPTEEEIIAKVGISPERYLEVMRAAKPVYSLH----SRH
+++F+P+ R +TYA +WIR +I +S+ +S T R+ + + ++ A+ + E N P++EE+ VG+S E+ +++ + S+ S
Subjt: IDRFEPKRKFRLSTYALFWIRHAIIRSMTLSSFT-RVSFGLDSVRVEIQRAKLELLCELNRLPTEEEIIAKVGISPERYLEVMRAAKPVYSLH----SRH
Query: STTSEEFINGITDVEGTGGDNRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGNRTLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRY
TT +E I + +E +Q L+R + ++L+ L PKE +I+ R+G+DG R+L EI +S+E VR+ E +AL +LK L Y
Subjt: STTSEEFINGITDVEGTGGDNRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGNRTLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRY
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| AT3G53920.1 RNApolymerase sigma-subunit C | 8.5e-19 | 28.01 | Show/hide |
Query: QVQEELQKELGREPTEGELANVTNMNVIQVRRQLEVGHAARNKLIKHNLRLVLFVINKYFEDFASGPKFQDLCQAGVKGLITAIDRFEPKRKFRLSTYAL
+++ +L++E G+ + A MN + R L G R++L+K LVLF+ Y G +DL QAG G++ +RF+ R ++ STY
Subjt: QVQEELQKELGREPTEGELANVTNMNVIQVRRQLEVGHAARNKLIKHNLRLVLFVINKYFEDFASGPKFQDLCQAGVKGLITAIDRFEPKRKFRLSTYAL
Query: FWIRHAIIRSMTLSSFTR-VSFGLDSVRV--EIQRAKLELLCELN-RLPTEEEIIAKVGISPERYLEVMRAAKPVYSLHSR-HSTTSEEFINGITDVEGT
+WIR ++ S +S R V +R IQ+A+ L + +EEI G S ++ + K V S+ + + +F+ D
Subjt: FWIRHAIIRSMTLSSFTR-VSFGLDSVRV--EIQRAKLELLCELN-RLPTEEEIIAKVGISPERYLEVMRAAKPVYSLHSR-HSTTSEEFINGITDVEGT
Query: GGDNRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGNRTLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYL
+ R + D+L+ L+P+E V+ RYGL ++L EI L +S+E +RK E +A+ KL+ + LR YL
Subjt: GGDNRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGNRTLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYL
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| AT5G24120.1 sigma factor E | 2.3e-178 | 65.25 | Show/hide |
Query: MGVVTVSSSAARTPLRLGAKFSNHNSTLKKPSIVAFKADKHTNTSL-VSPHEQVTLPVESNNRNKKRSGKTSKPLKRVK---AVFLDEATPCTLDVDYNE
MGVV++SSSAAR+PL LG H S+LKKPSIVAFKAD +N++L + P EQV +P E +N KKR KP K K ++ + A C+L VDYNE
Subjt: MGVVTVSSSAARTPLRLGAKFSNHNSTLKKPSIVAFKADKHTNTSL-VSPHEQVTLPVESNNRNKKRSGKTSKPLKRVK---AVFLDEATPCTLDVDYNE
Query: AAAKLENIFKLSPVTEEDIDMESKDGRSKR--GQQRRKKSDKRPSDGIVRNQTKRIKRLDLDKRIALKSNKEGKEAPSLRKQKDTK--NEDDDIDGLVRD
AAA+LE+I+KLSP T ++ + +DG SK ++R++K +VRN K+ KR+ LDKRIALK N + K + +K TK E++ I+ LVRD
Subjt: AAAKLENIFKLSPVTEEDIDMESKDGRSKR--GQQRRKKSDKRPSDGIVRNQTKRIKRLDLDKRIALKSNKEGKEAPSLRKQKDTK--NEDDDIDGLVRD
Query: YSASTDLVSLDWKKMKIPPVLPSSEHTRLFKLLQPMKALIQVQEELQKELGREPTEGELANVTNMNVIQVRRQLEVGHAARNKLIKHNLRLVLFVINKYF
YSAS D+VSLDWKKMKIPPVL S+EH LFKL+QPMKAL++V++ LQK LGREP E E+A NM +V++++E+G AARNKLIKHNLRLVLFV+NKYF
Subjt: YSASTDLVSLDWKKMKIPPVLPSSEHTRLFKLLQPMKALIQVQEELQKELGREPTEGELANVTNMNVIQVRRQLEVGHAARNKLIKHNLRLVLFVINKYF
Query: EDFASGPKFQDLCQAGVKGLITAIDRFEPKRKFRLSTYALFWIRHAIIRSMTLSSFTRVSFGLDSVRVEIQRAKLELLCELNRLPTEEEIIAKVGISPER
+F +GPKFQDLCQAG++GLITAIDRFEPKRKFRLSTY LFWIRHAIIRSMT S+FTRV FGL+SVRVEI +AK EL E+ R PTE+E++ ++ I+PER
Subjt: EDFASGPKFQDLCQAGVKGLITAIDRFEPKRKFRLSTYALFWIRHAIIRSMTLSSFTRVSFGLDSVRVEIQRAKLELLCELNRLPTEEEIIAKVGISPER
Query: YLEVMRAAKPVYSLHSRHSTTSEEFINGITDVEGTGGDNRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGNRTLGEIAGNLNISREMVRKHEVKA
Y EV+RAAKPV SL+S+HS T EEFINGITDV+G G +N RQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKG+RTLGEIAGNLNISREMVRKHEVKA
Subjt: YLEVMRAAKPVYSLHSRHSTTSEEFINGITDVEGTGGDNRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGNRTLGEIAGNLNISREMVRKHEVKA
Query: LMKLKHPARVDYLRRYLI
LMKLKH ARVDYLR+Y++
Subjt: LMKLKHPARVDYLRRYLI
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