; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CaUC05G089680 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC05G089680
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionEKC/KEOPS complex, subunit Pcc1
Genome locationCiama_Chr05:10226021..10227699
RNA-Seq ExpressionCaUC05G089680
SyntenyCaUC05G089680
Gene Ontology termsGO:0070525 - tRNA threonylcarbamoyladenosine metabolic process (biological process)
GO:0000408 - EKC/KEOPS complex (cellular component)
InterPro domainsIPR015419 - CTAG/Pcc1 family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004146228.1 uncharacterized protein LOC101217139 [Cucumis sativus]1.1e-3886.87Show/hide
Query:  MAPTASVASDGEAKWEFSCEFEVNYESAKKASIVYNALIIDKELQPDKVKRVMSVSDGKLSIHFEAVEARFLRASFSAFVDVLTLATKTIEEFGQELDF
        M PTASVAS GE KWEFSC+FEV+YES KKASIVY AL++DKELQPDKVKR MS SDGKLSIHFEAVEARFLRASFSAFVDVLTLATKTIE+FGQE DF
Subjt:  MAPTASVASDGEAKWEFSCEFEVNYESAKKASIVYNALIIDKELQPDKVKRVMSVSDGKLSIHFEAVEARFLRASFSAFVDVLTLATKTIEEFGQELDF

XP_008466840.1 PREDICTED: uncharacterized protein LOC103504146 [Cucumis melo]7.9e-4086.87Show/hide
Query:  MAPTASVASDGEAKWEFSCEFEVNYESAKKASIVYNALIIDKELQPDKVKRVMSVSDGKLSIHFEAVEARFLRASFSAFVDVLTLATKTIEEFGQELDF
        M PTASVASDGEAKWEFSC+FEV+YES KKASIVYNALI+DKELQPDKVKR MS+S+GKLSIHFEAVEARFLRASFS+FVDVLTLATKTIE+FG E++F
Subjt:  MAPTASVASDGEAKWEFSCEFEVNYESAKKASIVYNALIIDKELQPDKVKRVMSVSDGKLSIHFEAVEARFLRASFSAFVDVLTLATKTIEEFGQELDF

XP_022141079.1 uncharacterized protein LOC111011564 [Momordica charantia]1.0e-3988.78Show/hide
Query:  MAPTASVASDGEAKWEFSCEFEVNYESAKKASIVYNALIIDKELQPDKVKRVMSVSDGKLSIHFEAVEARFLRASFSAFVDVLTLATKTIEEFGQELD
        MAPTASVASDGEAKWEF C+FEV+YES KKASIVYNAL +DKELQPDKVKR M+VSDGKLS+HFEAVEARFLRASFSAFVDVLTLATKTIE+FGQ LD
Subjt:  MAPTASVASDGEAKWEFSCEFEVNYESAKKASIVYNALIIDKELQPDKVKRVMSVSDGKLSIHFEAVEARFLRASFSAFVDVLTLATKTIEEFGQELD

XP_022945934.1 uncharacterized protein LOC111450028 [Cucurbita moschata]4.3e-3883.84Show/hide
Query:  MAPTASVASDGEAKWEFSCEFEVNYESAKKASIVYNALIIDKELQPDKVKRVMSVSDGKLSIHFEAVEARFLRASFSAFVDVLTLATKTIEEFGQELDF
        MAPTASV SDG+AKWEFSC+FEV+ ES KKASIVYNAL++DKELQPDKVKR M+VSDGKLS+HFEAVEARFLRAS+SAF+DVLTLA KTIE+FGQ LDF
Subjt:  MAPTASVASDGEAKWEFSCEFEVNYESAKKASIVYNALIIDKELQPDKVKRVMSVSDGKLSIHFEAVEARFLRASFSAFVDVLTLATKTIEEFGQELDF

XP_038895564.1 uncharacterized protein LOC120083771 [Benincasa hispida]5.8e-4392.93Show/hide
Query:  MAPTASVASDGEAKWEFSCEFEVNYESAKKASIVYNALIIDKELQPDKVKRVMSVSDGKLSIHFEAVEARFLRASFSAFVDVLTLATKTIEEFGQELDF
        MAPTASVASDGEAKWEFSC+FEV+YES KKASIVYNALI+DKELQPDKVKRVMSVSDGKLSIHFEAVEARFLRASFSAFVDVLTLATKT+E+FGQE+DF
Subjt:  MAPTASVASDGEAKWEFSCEFEVNYESAKKASIVYNALIIDKELQPDKVKRVMSVSDGKLSIHFEAVEARFLRASFSAFVDVLTLATKTIEEFGQELDF

TrEMBL top hitse value%identityAlignment
A0A0A0L7A2 Uncharacterized protein5.5e-3986.87Show/hide
Query:  MAPTASVASDGEAKWEFSCEFEVNYESAKKASIVYNALIIDKELQPDKVKRVMSVSDGKLSIHFEAVEARFLRASFSAFVDVLTLATKTIEEFGQELDF
        M PTASVAS GE KWEFSC+FEV+YES KKASIVY AL++DKELQPDKVKR MS SDGKLSIHFEAVEARFLRASFSAFVDVLTLATKTIE+FGQE DF
Subjt:  MAPTASVASDGEAKWEFSCEFEVNYESAKKASIVYNALIIDKELQPDKVKRVMSVSDGKLSIHFEAVEARFLRASFSAFVDVLTLATKTIEEFGQELDF

A0A1S3CTG0 uncharacterized protein LOC1035041463.8e-4086.87Show/hide
Query:  MAPTASVASDGEAKWEFSCEFEVNYESAKKASIVYNALIIDKELQPDKVKRVMSVSDGKLSIHFEAVEARFLRASFSAFVDVLTLATKTIEEFGQELDF
        M PTASVASDGEAKWEFSC+FEV+YES KKASIVYNALI+DKELQPDKVKR MS+S+GKLSIHFEAVEARFLRASFS+FVDVLTLATKTIE+FG E++F
Subjt:  MAPTASVASDGEAKWEFSCEFEVNYESAKKASIVYNALIIDKELQPDKVKRVMSVSDGKLSIHFEAVEARFLRASFSAFVDVLTLATKTIEEFGQELDF

A0A5D3CJ23 EKC/KEOPS complex, subunit Pcc13.8e-4086.87Show/hide
Query:  MAPTASVASDGEAKWEFSCEFEVNYESAKKASIVYNALIIDKELQPDKVKRVMSVSDGKLSIHFEAVEARFLRASFSAFVDVLTLATKTIEEFGQELDF
        M PTASVASDGEAKWEFSC+FEV+YES KKASIVYNALI+DKELQPDKVKR MS+S+GKLSIHFEAVEARFLRASFS+FVDVLTLATKTIE+FG E++F
Subjt:  MAPTASVASDGEAKWEFSCEFEVNYESAKKASIVYNALIIDKELQPDKVKRVMSVSDGKLSIHFEAVEARFLRASFSAFVDVLTLATKTIEEFGQELDF

A0A6J1CHJ5 uncharacterized protein LOC1110115645.0e-4088.78Show/hide
Query:  MAPTASVASDGEAKWEFSCEFEVNYESAKKASIVYNALIIDKELQPDKVKRVMSVSDGKLSIHFEAVEARFLRASFSAFVDVLTLATKTIEEFGQELD
        MAPTASVASDGEAKWEF C+FEV+YES KKASIVYNAL +DKELQPDKVKR M+VSDGKLS+HFEAVEARFLRASFSAFVDVLTLATKTIE+FGQ LD
Subjt:  MAPTASVASDGEAKWEFSCEFEVNYESAKKASIVYNALIIDKELQPDKVKRVMSVSDGKLSIHFEAVEARFLRASFSAFVDVLTLATKTIEEFGQELD

A0A6J1G2C3 uncharacterized protein LOC1114500282.1e-3883.84Show/hide
Query:  MAPTASVASDGEAKWEFSCEFEVNYESAKKASIVYNALIIDKELQPDKVKRVMSVSDGKLSIHFEAVEARFLRASFSAFVDVLTLATKTIEEFGQELDF
        MAPTASV SDG+AKWEFSC+FEV+ ES KKASIVYNAL++DKELQPDKVKR M+VSDGKLS+HFEAVEARFLRAS+SAF+DVLTLA KTIE+FGQ LDF
Subjt:  MAPTASVASDGEAKWEFSCEFEVNYESAKKASIVYNALIIDKELQPDKVKRVMSVSDGKLSIHFEAVEARFLRASFSAFVDVLTLATKTIEEFGQELDF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G53045.1 unknown protein7.9e-3063.54Show/hide
Query:  MAPTASVASDGEAKWEFSCEFEVNYESAKKASIVYNALIIDKELQPDKVKRVMSVSDGKLSIHFEAVEARFLRASFSAFVDVLTLATKTIEEFGQE
        MA T    +  +  W+FSC  +V++ES + A I Y +L +DKELQPDKV+RVMSVS+ KLS+HFEA+EAR LRASFSAFVDVLTLAT+TI+EFGQ+
Subjt:  MAPTASVASDGEAKWEFSCEFEVNYESAKKASIVYNALIIDKELQPDKVKRVMSVSDGKLSIHFEAVEARFLRASFSAFVDVLTLATKTIEEFGQE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCCGACAGCTTCCGTCGCTTCTGATGGTGAGGCCAAATGGGAATTCAGCTGTGAATTTGAAGTCAATTATGAGTCTGCGAAGAAAGCTTCAATTGTCTATAATGC
TTTAATCATCGATAAAGAGTTGCAGCCAGACAAGGTGAAAAGGGTGATGTCAGTTTCTGATGGAAAACTTTCAATACACTTTGAAGCAGTGGAAGCAAGGTTTTTGCGTG
CATCATTCAGTGCATTTGTTGATGTGCTTACTCTTGCCACAAAAACAATCGAAGAATTCGGACAAGAATTGGATTTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAAAGGCCGTGGAGCCGTTCTATTAGGTTTTTCAGTTGAATTGAAACGATGGCTCCGACAGCTTCCGTCGCTTCTGATGGTGAGGCCAAATGGGAATTCAGCTGTGA
ATTTGAAGTCAATTATGAGTCTGCGAAGAAAGCTTCAATTGTCTATAATGCTTTAATCATCGATAAAGAGTTGCAGCCAGACAAGGTGAAAAGGGTGATGTCAGTTTCTG
ATGGAAAACTTTCAATACACTTTGAAGCAGTGGAAGCAAGGTTTTTGCGTGCATCATTCAGTGCATTTGTTGATGTGCTTACTCTTGCCACAAAAACAATCGAAGAATTC
GGACAAGAATTGGATTTCTGATAGCCTTACTGCTCTATTTACATGCCTCTCAAATATCAAGTGTCATTTTTTGCTTAAAGCAGCTGTGATTTTAACTCTACATCTGACCT
GTAATTTTATCACAATGTTTTGTCGTTGTTTGATCAAGTGCAAAGGTCTTTCTGCACCCGTCATTCGAACATTGAGATCTAACAAGATAACATTTTCTGCACCCGCCATT
CGAACATTGAGATCTAACA
Protein sequenceShow/hide protein sequence
MAPTASVASDGEAKWEFSCEFEVNYESAKKASIVYNALIIDKELQPDKVKRVMSVSDGKLSIHFEAVEARFLRASFSAFVDVLTLATKTIEEFGQELDF