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CaUC05G090590 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC05G090590
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
Descriptioncytochrome b-c1 complex subunit 6-like
Genome locationCiama_Chr05:11287423..11289751
RNA-Seq ExpressionCaUC05G090590
SyntenyCaUC05G090590
Gene Ontology termsGO:0006122 - mitochondrial electron transport, ubiquinol to cytochrome c (biological process)
GO:0005750 - mitochondrial respiratory chain complex III (cellular component)
InterPro domainsIPR003422 - Cytochrome b-c1 complex, subunit 6
IPR023184 - Ubiquinol-cytochrome C reductase hinge domain
IPR036811 - Ubiquinol-cytochrome C reductase hinge domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8650514.1 hypothetical protein Csa_011326 [Cucumis sativus]1.9e-3058.4Show/hide
Query:  SLSFIMLKIICMDVNLSTFPCFF------IICRADEEPVDQKRYLEEACKPKCVKPLLEYQDVFSLKSGAIYFVSHIWVSADDLLACVKRIQGDDSGHKH
        +++F ++KI    +  S   C F      ++  ADEEPVDQKRYLEEACKPKCVKPLLEYQ                        ACVKRIQGDDSGHKH
Subjt:  SLSFIMLKIICMDVNLSTFPCFF------IICRADEEPVDQKRYLEEACKPKCVKPLLEYQDVFSLKSGAIYFVSHIWVSADDLLACVKRIQGDDSGHKH

Query:  CTGQYFDYWSCIDKCVAPKLFTKLK
        CTGQYFDYWSCIDKCVAPKL TKLK
Subjt:  CTGQYFDYWSCIDKCVAPKLFTKLK

KAG6576964.1 Cytochrome b-c1 complex subunit 6-1, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]1.1e-3068.37Show/hide
Query:  FFIICRADEEPVDQKRYLEEACKPKCVKPLLEYQDVFSLKSGAIYFVSHIWVSADDLLACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAPKLFTKLK
        ++++  ADEEPVDQKRYLEEACKPKCVKPLLEYQ                        ACVKRIQGD+SGHKHCTGQYFDYWSCIDKCVAPKLFTKLK
Subjt:  FFIICRADEEPVDQKRYLEEACKPKCVKPLLEYQDVFSLKSGAIYFVSHIWVSADDLLACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAPKLFTKLK

KAG6600342.1 Cytochrome b-c1 complex subunit 6-1, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]1.4e-3068.04Show/hide
Query:  FIICRADEEPVDQKRYLEEACKPKCVKPLLEYQDVFSLKSGAIYFVSHIWVSADDLLACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAPKLFTKLK
        +++  ADEEPVDQKRYLEEACKPKCVKPLLEYQ                        ACVKRIQGDDSGHKHCTGQYFDYWSC+DKCVAPKLFTK+K
Subjt:  FIICRADEEPVDQKRYLEEACKPKCVKPLLEYQDVFSLKSGAIYFVSHIWVSADDLLACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAPKLFTKLK

KAG7014985.1 hypothetical protein SDJN02_22616, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-3068.37Show/hide
Query:  FFIICRADEEPVDQKRYLEEACKPKCVKPLLEYQDVFSLKSGAIYFVSHIWVSADDLLACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAPKLFTKLK
        ++++  ADEEPVDQKRYLEEACKPKCVKPLLEYQ                        ACVKRIQGD+SGHKHCTGQYFDYWSCIDKCVAPKLFTKLK
Subjt:  FFIICRADEEPVDQKRYLEEACKPKCVKPLLEYQDVFSLKSGAIYFVSHIWVSADDLLACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAPKLFTKLK

XP_022942987.1 cytochrome b-c1 complex subunit 6-like [Cucurbita moschata]1.4e-3068.04Show/hide
Query:  FIICRADEEPVDQKRYLEEACKPKCVKPLLEYQDVFSLKSGAIYFVSHIWVSADDLLACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAPKLFTKLK
        +++  ADEEPVDQKRYLEEACKPKCVKPLLEYQ                        ACVKRIQGDDSGHKHCTGQYFDYWSC+DKCVAPKLFTK+K
Subjt:  FIICRADEEPVDQKRYLEEACKPKCVKPLLEYQDVFSLKSGAIYFVSHIWVSADDLLACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAPKLFTKLK

TrEMBL top hitse value%identityAlignment
A0A1S3C350 Cytochrome b-c1 complex subunit 61.2e-3073.91Show/hide
Query:  ADEEPVDQKRYLEEACKPKCVKPLLEYQDVFSLKSGAIYFVSHIWVSADDLLACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAPKLFTKLK
        ADEEPVDQKRYLEEACKPKCVKPLLEYQ                        ACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAPKLFTKLK
Subjt:  ADEEPVDQKRYLEEACKPKCVKPLLEYQDVFSLKSGAIYFVSHIWVSADDLLACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAPKLFTKLK

A0A5E4EXD3 PREDICTED: cytochrome1.6e-3067.01Show/hide
Query:  FIICRADEEPVDQKRYLEEACKPKCVKPLLEYQDVFSLKSGAIYFVSHIWVSADDLLACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAPKLFTKLK
        F+ C ADEEPVDQK+YLEE+CKPKCVKPLLEYQ                        ACVKRIQGD+SGHKHCTGQYFDYWSC+DKCVAPKLF KLK
Subjt:  FIICRADEEPVDQKRYLEEACKPKCVKPLLEYQDVFSLKSGAIYFVSHIWVSADDLLACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAPKLFTKLK

A0A6J1FRR8 cytochrome b-c1 complex subunit 6-like7.0e-3168.04Show/hide
Query:  FIICRADEEPVDQKRYLEEACKPKCVKPLLEYQDVFSLKSGAIYFVSHIWVSADDLLACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAPKLFTKLK
        +++  ADEEPVDQKRYLEEACKPKCVKPLLEYQ                        ACVKRIQGDDSGHKHCTGQYFDYWSC+DKCVAPKLFTK+K
Subjt:  FIICRADEEPVDQKRYLEEACKPKCVKPLLEYQDVFSLKSGAIYFVSHIWVSADDLLACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAPKLFTKLK

A0A6J1J694 Cytochrome b-c1 complex subunit 62.7e-3071.74Show/hide
Query:  ADEEPVDQKRYLEEACKPKCVKPLLEYQDVFSLKSGAIYFVSHIWVSADDLLACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAPKLFTKLK
        ADEEPVDQKRYLEEACKPKCVKPLLEYQ                        ACVKRIQGDDSGHKHCTGQYFDYWSC+DKCVAPKLFTK+K
Subjt:  ADEEPVDQKRYLEEACKPKCVKPLLEYQDVFSLKSGAIYFVSHIWVSADDLLACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAPKLFTKLK

M5XBF4 UCR_hinge domain-containing protein1.6e-3067.01Show/hide
Query:  FIICRADEEPVDQKRYLEEACKPKCVKPLLEYQDVFSLKSGAIYFVSHIWVSADDLLACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAPKLFTKLK
        F+ C ADEEPVDQK+YLEE+CKPKCVKPLLEYQ                        ACVKRIQGD+SGHKHCTGQYFDYWSC+DKCVAPKLF KLK
Subjt:  FIICRADEEPVDQKRYLEEACKPKCVKPLLEYQDVFSLKSGAIYFVSHIWVSADDLLACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAPKLFTKLK

SwissProt top hitse value%identityAlignment
P48504 Cytochrome b-c1 complex subunit 65.7e-2254.35Show/hide
Query:  ADEEPVDQKRYLEEACKPKCVKPLLEYQDVFSLKSGAIYFVSHIWVSADDLLACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAPKLFTKLK
        +DEE VD K  LE +CKPKCV+ L EYQ                        AC KR++GD+SGHKHCTGQYFDYW CIDKCVA KLF  LK
Subjt:  ADEEPVDQKRYLEEACKPKCVKPLLEYQDVFSLKSGAIYFVSHIWVSADDLLACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAPKLFTKLK

Q0WWE3 Cytochrome b-c1 complex subunit 6-1, mitochondrial2.2e-2966.3Show/hide
Query:  ADEEPVDQKRYLEEACKPKCVKPLLEYQDVFSLKSGAIYFVSHIWVSADDLLACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAPKLFTKLK
        AD+E VD K+YLEE+CKPKCVKPLLEYQ                        ACVKRIQGDDSGHKHCTGQYFDYW CIDKCVAPKLF KLK
Subjt:  ADEEPVDQKRYLEEACKPKCVKPLLEYQDVFSLKSGAIYFVSHIWVSADDLLACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAPKLFTKLK

Q9SJV7 Cytochrome b-c1 complex subunit 6-2, mitochondrial8.8e-2359.04Show/hide
Query:  DEEPVDQKRYLEEACKPKCVKPLLEYQDVFSLKSGAIYFVSHIWVSADDLLACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVA
        +E+ VDQKRY EE+CKPKCVKPLLEYQ                        ACVKRIQ D+SGHKHCTGQYFDYW C+DKCV+
Subjt:  DEEPVDQKRYLEEACKPKCVKPLLEYQDVFSLKSGAIYFVSHIWVSADDLLACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVA

Arabidopsis top hitse value%identityAlignment
AT1G15120.1 Ubiquinol-cytochrome C reductase hinge protein1.5e-3066.3Show/hide
Query:  ADEEPVDQKRYLEEACKPKCVKPLLEYQDVFSLKSGAIYFVSHIWVSADDLLACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAPKLFTKLK
        AD+E VD K+YLEE+CKPKCVKPLLEYQ                        ACVKRIQGDDSGHKHCTGQYFDYW CIDKCVAPKLF KLK
Subjt:  ADEEPVDQKRYLEEACKPKCVKPLLEYQDVFSLKSGAIYFVSHIWVSADDLLACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVAPKLFTKLK

AT1G15120.2 Ubiquinol-cytochrome C reductase hinge protein2.5e-2556.25Show/hide
Query:  VNLSTFPCFFIICRADEEPVDQKRYLEEACKPKCVKPLLEYQDVFSLKSGAIYFVSHIWVSADDLLACVKRIQGDDSGHKHCTGQYFDYWSCIDKC
        +++S F        AD+E VD K+YLEE+CKPKCVKPLLEYQ                        ACVKRIQGDDSGHKHCTGQYFDYW CIDKC
Subjt:  VNLSTFPCFFIICRADEEPVDQKRYLEEACKPKCVKPLLEYQDVFSLKSGAIYFVSHIWVSADDLLACVKRIQGDDSGHKHCTGQYFDYWSCIDKC

AT2G01090.1 Ubiquinol-cytochrome C reductase hinge protein6.3e-2459.04Show/hide
Query:  DEEPVDQKRYLEEACKPKCVKPLLEYQDVFSLKSGAIYFVSHIWVSADDLLACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVA
        +E+ VDQKRY EE+CKPKCVKPLLEYQ                        ACVKRIQ D+SGHKHCTGQYFDYW C+DKCV+
Subjt:  DEEPVDQKRYLEEACKPKCVKPLLEYQDVFSLKSGAIYFVSHIWVSADDLLACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVA

AT2G01090.2 Ubiquinol-cytochrome C reductase hinge protein6.3e-2459.04Show/hide
Query:  DEEPVDQKRYLEEACKPKCVKPLLEYQDVFSLKSGAIYFVSHIWVSADDLLACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVA
        +E+ VDQKRY EE+CKPKCVKPLLEYQ                        ACVKRIQ D+SGHKHCTGQYFDYW C+DKCV+
Subjt:  DEEPVDQKRYLEEACKPKCVKPLLEYQDVFSLKSGAIYFVSHIWVSADDLLACVKRIQGDDSGHKHCTGQYFDYWSCIDKCVA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTTTCCATACCCTGTGTCTTTATCTTTCATAATGTTGAAGATTATTTGTATGGATGTTAACTTATCTACATTTCCTTGTTTCTTTATAATATGTAGGGCG
GATGAAGAACCCGTTGATCAGAAGAGGTATCTTGAAGAAGCTTGCAAACCCAAGTGTGTGAAACCACTACTTGAATATCAGGATGTGTTTTCCCTGAAAAGTGGC
GCAATTTATTTTGTCTCTCATATCTGGGTTTCAGCTGATGACTTGTTGGCGTGCGTGAAGAGAATTCAAGGGGATGACAGTGGTCATAAGCATTGCACTGGACAA
TATTTTGATTACTGGTCTTGCATTGACAAATGTGTTGCACCAAAACTATTTACGAAACTTAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCTTTTCCATACCCTGTGTCTTTATCTTTCATAATGTTGAAGATTATTTGTATGGATGTTAACTTATCTACATTTCCTTGTTTCTTTATAATATGTAGGGCG
GATGAAGAACCCGTTGATCAGAAGAGGTATCTTGAAGAAGCTTGCAAACCCAAGTGTGTGAAACCACTACTTGAATATCAGGATGTGTTTTCCCTGAAAAGTGGC
GCAATTTATTTTGTCTCTCATATCTGGGTTTCAGCTGATGACTTGTTGGCGTGCGTGAAGAGAATTCAAGGGGATGACAGTGGTCATAAGCATTGCACTGGACAA
TATTTTGATTACTGGTCTTGCATTGACAAATGTGTTGCACCAAAACTATTTACGAAACTTAAGTAA
Protein sequenceShow/hide protein sequence
MSFPYPVSLSFIMLKIICMDVNLSTFPCFFIICRADEEPVDQKRYLEEACKPKCVKPLLEYQDVFSLKSGAIYFVSHIWVSADDLLACVKRIQGDDSGHKHCTGQ
YFDYWSCIDKCVAPKLFTKLK