; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CaUC05G091380 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC05G091380
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionATP-dependent Clp protease proteolytic subunit
Genome locationCiama_Chr05:12678235..12683411
RNA-Seq ExpressionCaUC05G091380
SyntenyCaUC05G091380
Gene Ontology termsGO:0006515 - protein quality control for misfolded or incompletely synthesized proteins (biological process)
GO:0009368 - endopeptidase Clp complex (cellular component)
GO:0009526 - plastid envelope (cellular component)
GO:0009570 - chloroplast stroma (cellular component)
GO:0004176 - ATP-dependent peptidase activity (molecular function)
GO:0004252 - serine-type endopeptidase activity (molecular function)
GO:0051117 - ATPase binding (molecular function)
InterPro domainsIPR001907 - ATP-dependent Clp protease proteolytic subunit
IPR018215 - ClpP, Ser active site
IPR023562 - Clp protease proteolytic subunit /Translocation-enhancing protein TepA
IPR029045 - ClpP/crotonase-like domain superfamily
IPR033135 - ClpP, histidine active site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060718.1 ATP-dependent Clp protease proteolytic subunit 3 [Cucumis melo var. makuwa]9.1e-16582.67Show/hide
Query:  MELSFTYAPSPSPHRLMRFDHGF-LSSHFPISTPSKHSHGGNSTSNAFRIRN-SVPVVK-PSLNSSSLRRTLSSNWDVLDNYSASSAPSLPRFEELDTTN
        MELSFT+APSPSP+ L RFDHG   SSH PISTPS HSHG N TSN FRIRN SVPV+  PSL+SSSLRRTLSSNWDVL NYSASSAPSLPRFEELDTTN
Subjt:  MELSFTYAPSPSPHRLMRFDHGF-LSSHFPISTPSKHSHGGNSTSNAFRIRN-SVPVVK-PSLNSSSLRRTLSSNWDVLDNYSASSAPSLPRFEELDTTN

Query:  MLLRQRIVFLGS------------------------------------QVDDITADFIISQLLFLDAADPTKDIKLFINSPGGSVTAGMGIYDAMKLCKA
        MLLRQRI+FLGS                                    QVDD+TADFIISQLLFLDA DPTKDIKLFINSPGGSVTAGMGIYDAMKLCKA
Subjt:  MLLRQRIVFLGS------------------------------------QVDDITADFIISQLLFLDAADPTKDIKLFINSPGGSVTAGMGIYDAMKLCKA

Query:  DVSTVCLGLAASMGAFLLASGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLQQIEFDTDRDNFMNPWEAKEYGLI
        DVST+CLGLAASMGAFLLASGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPL+QIE DTDRDNFMNPWEAKEYGLI
Subjt:  DVSTVCLGLAASMGAFLLASGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLQQIEFDTDRDNFMNPWEAKEYGLI

Query:  DEVIDDGKPGLVAPIAEATPPPKTRVWDLWKVEGSRKAKKNLPSENKILQNGYQGGQGSDEERGSQQETEKPSPV
        DEVIDDGKPGL+APIAEATPPPKTRVWDLWKVEGSRKAKKNLPSE+KIL+NGYQGG+GSDEERGSQQETE+PSPV
Subjt:  DEVIDDGKPGLVAPIAEATPPPKTRVWDLWKVEGSRKAKKNLPSENKILQNGYQGGQGSDEERGSQQETEKPSPV

XP_008457103.1 PREDICTED: ATP-dependent Clp protease proteolytic subunit 3, chloroplastic [Cucumis melo]3.2e-17091.45Show/hide
Query:  MELSFTYAPSPSPHRLMRFDHGF-LSSHFPISTPSKHSHGGNSTSNAFRIRN-SVPVVK-PSLNSSSLRRTLSSNWDVLDNYSASSAPSLPRFEELDTTN
        MELSFT+APSPSP+ L RFDHG   SSH PISTPS HSHG N TSN FRIRN SVPV+  PSL+SSSLRRTLSSNWDVL NYSASSAPSLPRFEELDTTN
Subjt:  MELSFTYAPSPSPHRLMRFDHGF-LSSHFPISTPSKHSHGGNSTSNAFRIRN-SVPVVK-PSLNSSSLRRTLSSNWDVLDNYSASSAPSLPRFEELDTTN

Query:  MLLRQRIVFLGSQVDDITADFIISQLLFLDAADPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNGRVMI
        MLLRQRI+FLGSQVDD+TADFIISQLLFLDA DPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVST+CLGLAASMGAFLLASGSKGKRFCMPNGRVMI
Subjt:  MLLRQRIVFLGSQVDDITADFIISQLLFLDAADPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNGRVMI

Query:  HQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLQQIEFDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLVAPIAEATPPPKTRVWDLWKVEGSR
        HQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPL+QIE DTDRDNFMNPWEAKEYGLIDEVIDDGKPGL+APIAEATPPPKTRVWDLWKVEGSR
Subjt:  HQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLQQIEFDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLVAPIAEATPPPKTRVWDLWKVEGSR

Query:  KAKKNLPSENKILQNGYQGGQGSDEERGSQQETEKPSPV
        KAKKNLPSE+KIL+NGYQGG+GSDEERGSQQETE+PSPV
Subjt:  KAKKNLPSENKILQNGYQGGQGSDEERGSQQETEKPSPV

XP_011651427.1 ATP-dependent Clp protease proteolytic subunit 3, chloroplastic [Cucumis sativus]8.0e-16990.56Show/hide
Query:  MELSFTYAPSPSPHRLMRFDHGFLSSHFPISTPSKHSHGGNSTSNAFRIRN-SVPVVK-PSLNSSSLRRTLSSNWDVLDNYSASSAPSLPRFEELDTTNM
        MELSFT+APSPSP+ L R DHGF SSHFPISTPSKHSHGGN TSNAFRIRN SVPVV  PS +SSSLRRTLSSNWDV  NYS SSA SLPRFEELDTTNM
Subjt:  MELSFTYAPSPSPHRLMRFDHGFLSSHFPISTPSKHSHGGNSTSNAFRIRN-SVPVVK-PSLNSSSLRRTLSSNWDVLDNYSASSAPSLPRFEELDTTNM

Query:  LLRQRIVFLGSQVDDITADFIISQLLFLDAADPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNGRVMIH
        LLRQRI+FLGSQVDD+TADFIISQLLFLDA DPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNGRVMIH
Subjt:  LLRQRIVFLGSQVDDITADFIISQLLFLDAADPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNGRVMIH

Query:  QPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLQQIEFDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLVAPIAEATPPPKTRVWDLWKVEGSRK
        QPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKP++QIE DT+RDNFMNPWEAKEYGLIDEVIDDGKPGL+APIAEATPPPKTR+WDLWKVEGSRK
Subjt:  QPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLQQIEFDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLVAPIAEATPPPKTRVWDLWKVEGSRK

Query:  AKKNLPSENKILQNGY-QGGQGSDEERGSQQETEKPSPV
        AKKNLPSE+KIL+NGY +GGQGSD+ERG QQETE+PSPV
Subjt:  AKKNLPSENKILQNGY-QGGQGSDEERGSQQETEKPSPV

XP_022143418.1 ATP-dependent Clp protease proteolytic subunit 3, chloroplastic [Momordica charantia]2.0e-16788.39Show/hide
Query:  MELSFTYAPSPSPHRLMRFDHGFLSSHFPISTPSKHSHGGNSTSNAFRIRNSVPVVKPSLNSSSLRRTLSSNWDVLDNYSASSAPSLPRFEELDTTNMLL
        ME+SFTY PSPSP RLMRFDHG LSS FP+ TP KHSHGGNS+ N  R   S P+VK SL+SSS+RRTLSSNWDVL+N+SA+SAPSL RFEELDTTNMLL
Subjt:  MELSFTYAPSPSPHRLMRFDHGFLSSHFPISTPSKHSHGGNSTSNAFRIRNSVPVVKPSLNSSSLRRTLSSNWDVLDNYSASSAPSLPRFEELDTTNMLL

Query:  RQRIVFLGSQVDDITADFIISQLLFLDAADPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNGRVMIHQP
        RQRI+FLGSQVDD+TADFIISQLLFLDA D TKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLA+GSKGKRFCMPNGRVMIHQP
Subjt:  RQRIVFLGSQVDDITADFIISQLLFLDAADPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNGRVMIHQP

Query:  LGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLQQIEFDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLVAPIAEATPPPKTRVWDLWKVEGSRKAK
        LGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPL+QIE DTDRDNFMNPWEAKEYGLIDEVIDDGKPGL+APIA+A  PPKTRVWDLWKVEGSRKAK
Subjt:  LGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLQQIEFDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLVAPIAEATPPPKTRVWDLWKVEGSRKAK

Query:  KNLPSENKILQNGYQGGQGSDEERGSQQETEKPSPV
        KNLPSE+KILQNGYQGGQG+DEERG+QQETE+PSPV
Subjt:  KNLPSENKILQNGYQGGQGSDEERGSQQETEKPSPV

XP_038902354.1 ATP-dependent Clp protease proteolytic subunit 3, chloroplastic [Benincasa hispida]6.7e-17693.15Show/hide
Query:  MELSFTYAPSPSPHRLMRFDHGFLSSHFPISTPSKHSHGGNSTSNAFRIRNSVPVVKPSLNSSSLRRTLSSNWDVLDNYSASSAPSLPRFEELDTTNMLL
        MELSFTYAPS SPHRLMR DHG  SS+FPIS PSKHSHGGNSTSNAFRIRNSVPVV PS NSSSLRRTLSS+WDVLDNYSASSAPSLPRFEELDTTNMLL
Subjt:  MELSFTYAPSPSPHRLMRFDHGFLSSHFPISTPSKHSHGGNSTSNAFRIRNSVPVVKPSLNSSSLRRTLSSNWDVLDNYSASSAPSLPRFEELDTTNMLL

Query:  RQRIVFLGSQVDDITADFIISQLLFLDAADPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNGRVMIHQP
        RQRI+FLGSQVDD+TADFIISQLLFLDA DPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVST+CLGLAASMGAFLLASGSKGKRFCMPNGRVMIHQP
Subjt:  RQRIVFLGSQVDDITADFIISQLLFLDAADPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNGRVMIHQP

Query:  LGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLQQIEFDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLVAPIAEATPPPKTRVWDLWKVEGSRKAK
        LGTAGGKATEMSIRIREM YHKIKLNKIFSRITGKPL+QIE DTDRDNFMNPWEAK+YGLIDEVIDDGKPGL+AP AEATPPPKTRVWDLWKVEGSRK K
Subjt:  LGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLQQIEFDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLVAPIAEATPPPKTRVWDLWKVEGSRKAK

Query:  KNLPSENKILQNGYQGGQGSDEERGSQQETEKPSPV
        KNLPSENKILQNGYQ GQGSDEERGSQQETE+ SPV
Subjt:  KNLPSENKILQNGYQGGQGSDEERGSQQETEKPSPV

TrEMBL top hitse value%identityAlignment
A0A0A0LA84 ATP-dependent Clp protease proteolytic subunit3.9e-16990.56Show/hide
Query:  MELSFTYAPSPSPHRLMRFDHGFLSSHFPISTPSKHSHGGNSTSNAFRIRN-SVPVVK-PSLNSSSLRRTLSSNWDVLDNYSASSAPSLPRFEELDTTNM
        MELSFT+APSPSP+ L R DHGF SSHFPISTPSKHSHGGN TSNAFRIRN SVPVV  PS +SSSLRRTLSSNWDV  NYS SSA SLPRFEELDTTNM
Subjt:  MELSFTYAPSPSPHRLMRFDHGFLSSHFPISTPSKHSHGGNSTSNAFRIRN-SVPVVK-PSLNSSSLRRTLSSNWDVLDNYSASSAPSLPRFEELDTTNM

Query:  LLRQRIVFLGSQVDDITADFIISQLLFLDAADPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNGRVMIH
        LLRQRI+FLGSQVDD+TADFIISQLLFLDA DPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNGRVMIH
Subjt:  LLRQRIVFLGSQVDDITADFIISQLLFLDAADPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNGRVMIH

Query:  QPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLQQIEFDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLVAPIAEATPPPKTRVWDLWKVEGSRK
        QPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKP++QIE DT+RDNFMNPWEAKEYGLIDEVIDDGKPGL+APIAEATPPPKTR+WDLWKVEGSRK
Subjt:  QPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLQQIEFDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLVAPIAEATPPPKTRVWDLWKVEGSRK

Query:  AKKNLPSENKILQNGY-QGGQGSDEERGSQQETEKPSPV
        AKKNLPSE+KIL+NGY +GGQGSD+ERG QQETE+PSPV
Subjt:  AKKNLPSENKILQNGY-QGGQGSDEERGSQQETEKPSPV

A0A1S3C615 ATP-dependent Clp protease proteolytic subunit1.6e-17091.45Show/hide
Query:  MELSFTYAPSPSPHRLMRFDHGF-LSSHFPISTPSKHSHGGNSTSNAFRIRN-SVPVVK-PSLNSSSLRRTLSSNWDVLDNYSASSAPSLPRFEELDTTN
        MELSFT+APSPSP+ L RFDHG   SSH PISTPS HSHG N TSN FRIRN SVPV+  PSL+SSSLRRTLSSNWDVL NYSASSAPSLPRFEELDTTN
Subjt:  MELSFTYAPSPSPHRLMRFDHGF-LSSHFPISTPSKHSHGGNSTSNAFRIRN-SVPVVK-PSLNSSSLRRTLSSNWDVLDNYSASSAPSLPRFEELDTTN

Query:  MLLRQRIVFLGSQVDDITADFIISQLLFLDAADPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNGRVMI
        MLLRQRI+FLGSQVDD+TADFIISQLLFLDA DPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVST+CLGLAASMGAFLLASGSKGKRFCMPNGRVMI
Subjt:  MLLRQRIVFLGSQVDDITADFIISQLLFLDAADPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNGRVMI

Query:  HQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLQQIEFDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLVAPIAEATPPPKTRVWDLWKVEGSR
        HQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPL+QIE DTDRDNFMNPWEAKEYGLIDEVIDDGKPGL+APIAEATPPPKTRVWDLWKVEGSR
Subjt:  HQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLQQIEFDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLVAPIAEATPPPKTRVWDLWKVEGSR

Query:  KAKKNLPSENKILQNGYQGGQGSDEERGSQQETEKPSPV
        KAKKNLPSE+KIL+NGYQGG+GSDEERGSQQETE+PSPV
Subjt:  KAKKNLPSENKILQNGYQGGQGSDEERGSQQETEKPSPV

A0A5A7UZN2 ATP-dependent Clp protease proteolytic subunit4.4e-16582.67Show/hide
Query:  MELSFTYAPSPSPHRLMRFDHGF-LSSHFPISTPSKHSHGGNSTSNAFRIRN-SVPVVK-PSLNSSSLRRTLSSNWDVLDNYSASSAPSLPRFEELDTTN
        MELSFT+APSPSP+ L RFDHG   SSH PISTPS HSHG N TSN FRIRN SVPV+  PSL+SSSLRRTLSSNWDVL NYSASSAPSLPRFEELDTTN
Subjt:  MELSFTYAPSPSPHRLMRFDHGF-LSSHFPISTPSKHSHGGNSTSNAFRIRN-SVPVVK-PSLNSSSLRRTLSSNWDVLDNYSASSAPSLPRFEELDTTN

Query:  MLLRQRIVFLGS------------------------------------QVDDITADFIISQLLFLDAADPTKDIKLFINSPGGSVTAGMGIYDAMKLCKA
        MLLRQRI+FLGS                                    QVDD+TADFIISQLLFLDA DPTKDIKLFINSPGGSVTAGMGIYDAMKLCKA
Subjt:  MLLRQRIVFLGS------------------------------------QVDDITADFIISQLLFLDAADPTKDIKLFINSPGGSVTAGMGIYDAMKLCKA

Query:  DVSTVCLGLAASMGAFLLASGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLQQIEFDTDRDNFMNPWEAKEYGLI
        DVST+CLGLAASMGAFLLASGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPL+QIE DTDRDNFMNPWEAKEYGLI
Subjt:  DVSTVCLGLAASMGAFLLASGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLQQIEFDTDRDNFMNPWEAKEYGLI

Query:  DEVIDDGKPGLVAPIAEATPPPKTRVWDLWKVEGSRKAKKNLPSENKILQNGYQGGQGSDEERGSQQETEKPSPV
        DEVIDDGKPGL+APIAEATPPPKTRVWDLWKVEGSRKAKKNLPSE+KIL+NGYQGG+GSDEERGSQQETE+PSPV
Subjt:  DEVIDDGKPGLVAPIAEATPPPKTRVWDLWKVEGSRKAKKNLPSENKILQNGYQGGQGSDEERGSQQETEKPSPV

A0A6J1CQN6 ATP-dependent Clp protease proteolytic subunit9.5e-16888.39Show/hide
Query:  MELSFTYAPSPSPHRLMRFDHGFLSSHFPISTPSKHSHGGNSTSNAFRIRNSVPVVKPSLNSSSLRRTLSSNWDVLDNYSASSAPSLPRFEELDTTNMLL
        ME+SFTY PSPSP RLMRFDHG LSS FP+ TP KHSHGGNS+ N  R   S P+VK SL+SSS+RRTLSSNWDVL+N+SA+SAPSL RFEELDTTNMLL
Subjt:  MELSFTYAPSPSPHRLMRFDHGFLSSHFPISTPSKHSHGGNSTSNAFRIRNSVPVVKPSLNSSSLRRTLSSNWDVLDNYSASSAPSLPRFEELDTTNMLL

Query:  RQRIVFLGSQVDDITADFIISQLLFLDAADPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNGRVMIHQP
        RQRI+FLGSQVDD+TADFIISQLLFLDA D TKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLA+GSKGKRFCMPNGRVMIHQP
Subjt:  RQRIVFLGSQVDDITADFIISQLLFLDAADPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNGRVMIHQP

Query:  LGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLQQIEFDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLVAPIAEATPPPKTRVWDLWKVEGSRKAK
        LGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPL+QIE DTDRDNFMNPWEAKEYGLIDEVIDDGKPGL+APIA+A  PPKTRVWDLWKVEGSRKAK
Subjt:  LGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLQQIEFDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLVAPIAEATPPPKTRVWDLWKVEGSRKAK

Query:  KNLPSENKILQNGYQGGQGSDEERGSQQETEKPSPV
        KNLPSE+KILQNGYQGGQG+DEERG+QQETE+PSPV
Subjt:  KNLPSENKILQNGYQGGQGSDEERGSQQETEKPSPV

A0A6J1G9P1 ATP-dependent Clp protease proteolytic subunit7.8e-16287.28Show/hide
Query:  MELSFTYAPSPSPH-RLMRFDHGFLSSHFPISTPSKHSHGGNSTSNAFRIRNSVPV--VKPSLNSSSLRRTLSSNWDVLDNYSASSAPSLPRFEELDTTN
        MELSFTYAPSPS H RLM F+HG L+S FP+STP KHSHG NS+SNAFRIR SVPV  VK SL+SS LRRTLSSNWDVL NYSA+SAP+LPRFEELDTTN
Subjt:  MELSFTYAPSPSPH-RLMRFDHGFLSSHFPISTPSKHSHGGNSTSNAFRIRNSVPV--VKPSLNSSSLRRTLSSNWDVLDNYSASSAPSLPRFEELDTTN

Query:  MLLRQRIVFLGSQVDDITADFIISQLLFLDAADPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNGRVMI
        MLLRQRI+FLGSQVDD+TADFIISQLLFLDA DPTKDIKL INSPGGSVTAGMGIYDAMKLCKADVSTVC+GLAASMGAFLLA+GSKGKRFCMPNGRVMI
Subjt:  MLLRQRIVFLGSQVDDITADFIISQLLFLDAADPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNGRVMI

Query:  HQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLQQIEFDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLVAPIAEATPPPKTRVWDLWKVEGSR
        HQPLGTAGG+AT+MSIR+REMAYHKIKLNKI SRITGKPL+QIE DTDRDNFMNPWEAKEYGLIDEVIDDGKPGL+APIAEA PPPKTRVWDLWK+EGSR
Subjt:  HQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLQQIEFDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLVAPIAEATPPPKTRVWDLWKVEGSR

Query:  KAKKNLPSENKILQNGYQGGQGSDEERGSQQETEKPSP
        KAKKNLPSE KILQNGY   QGSDEER  Q ETE+PSP
Subjt:  KAKKNLPSENKILQNGYQGGQGSDEERGSQQETEKPSP

SwissProt top hitse value%identityAlignment
O34125 ATP-dependent Clp protease proteolytic subunit 25.6e-5661.63Show/hide
Query:  DTTNMLLRQRIVFLGSQVDDITADFIISQLLFLDAADPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNG
        D  + LLR+RIVFLG+ VDD  AD I++QLLFL+A DP KDI+L+INSPGGSVTAGM IYD M+    DV+T+C GLAASMGAFLL+ G++GKR  +P+ 
Subjt:  DTTNMLLRQRIVFLGSQVDDITADFIISQLLFLDAADPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNG

Query:  RVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLQQIEFDTDRDNFMNPWEAKEYGLIDEVI
        R+MIHQPLG A G+A ++ I+ RE+ YHK  LN + ++ TG+PL++IE DTDRD FM+P EAK YGLID+V+
Subjt:  RVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLQQIEFDTDRDNFMNPWEAKEYGLIDEVI

Q3MFR5 ATP-dependent Clp protease proteolytic subunit 17.3e-5661.27Show/hide
Query:  DTTNMLLRQRIVFLGSQVDDITADFIISQLLFLDAADPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNG
        D  + LLR+RI+FLG QVD   A+ I++QLLFLDA DP KDI L+INSPGGSVTAGMGI+D MK  + DV T+C GLAASMGAFLL++G+KGKR  +P+ 
Subjt:  DTTNMLLRQRIVFLGSQVDDITADFIISQLLFLDAADPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNG

Query:  RVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLQQIEFDTDRDNFMNPWEAKEYGLIDEVID
        R+MIHQPLG A G+AT++ I+ RE+ YHK +LN   +  TG+P+++I  DT+RD FM+P EA++YGLID+VID
Subjt:  RVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLQQIEFDTDRDNFMNPWEAKEYGLIDEVID

Q5N1P6 ATP-dependent Clp protease proteolytic subunit 35.6e-5661.63Show/hide
Query:  DTTNMLLRQRIVFLGSQVDDITADFIISQLLFLDAADPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNG
        D  + LLR+RIVFLG+ VDD  AD I++QLLFL+A DP KDI+L+INSPGGSVTAGM IYD M+    DV+T+C GLAASMGAFLL+ G++GKR  +P+ 
Subjt:  DTTNMLLRQRIVFLGSQVDDITADFIISQLLFLDAADPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNG

Query:  RVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLQQIEFDTDRDNFMNPWEAKEYGLIDEVI
        R+MIHQPLG A G+A ++ I+ RE+ YHK  LN + ++ TG+PL++IE DTDRD FM+P EAK YGLID+V+
Subjt:  RVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLQQIEFDTDRDNFMNPWEAKEYGLIDEVI

Q8YXH5 ATP-dependent Clp protease proteolytic subunit 12.5e-5662.43Show/hide
Query:  DTTNMLLRQRIVFLGSQVDDITADFIISQLLFLDAADPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNG
        D  + LLR+RIVFLG QVD   A+ I++QLLFLDA DP KDI L+INSPGGSVTAGMGI+D MK  + DV T+C GLAASMGAFLL++G+KGKR  +P+ 
Subjt:  DTTNMLLRQRIVFLGSQVDDITADFIISQLLFLDAADPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNG

Query:  RVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLQQIEFDTDRDNFMNPWEAKEYGLIDEVID
        R+MIHQPLG A G+AT++ I+ RE+ YHK +LN   +  TG+P+++I  DT+RD FM+P EAK+YGLID+VID
Subjt:  RVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLQQIEFDTDRDNFMNPWEAKEYGLIDEVID

Q9SXJ6 ATP-dependent Clp protease proteolytic subunit 3, chloroplastic4.8e-11669.4Show/hide
Query:  MELSFTYAPSPSPHRLMRFDHGFLSSHFPISTPSKHSHGGNSTSNAFRIRNSVPVVKPSLNSSSLRRTLSSNWDVLD---NYSASSAPSLPRFEELDTTN
        ME+S   A S + + +   + G  + +FPI      +H    TS  F +R+S+ + KP       R+TLSSNWDV     +  A S   LP FEELDTTN
Subjt:  MELSFTYAPSPSPHRLMRFDHGFLSSHFPISTPSKHSHGGNSTSNAFRIRNSVPVVKPSLNSSSLRRTLSSNWDVLD---NYSASSAPSLPRFEELDTTN

Query:  MLLRQRIVFLGSQVDDITADFIISQLLFLDAADPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNGRVMI
        MLLRQRIVFLGSQVDD+TAD +ISQLL LDA D  +DI LFINSPGGS+TAGMGIYDAMK CKADVSTVCLGLAASMGAFLLASGSKGKR+CMPN +VMI
Subjt:  MLLRQRIVFLGSQVDDITADFIISQLLFLDAADPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNGRVMI

Query:  HQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLQQIEFDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLVAPIAEATPPPKTRVWDLWKVEGSR
        HQPLGTAGGKATEMSIRIREM YHKIKLNKIFSRITGKP  +IE DTDRDNF+NPWEAKEYGLID VIDDGKPGL+API + TPPPKT+VWDLWKVEG++
Subjt:  HQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLQQIEFDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLVAPIAEATPPPKTRVWDLWKVEGSR

Query:  KAKKNLPSENKILQNGY
        K   NLPSE  + QNGY
Subjt:  KAKKNLPSENKILQNGY

Arabidopsis top hitse value%identityAlignment
AT1G02560.1 nuclear encoded CLP protease 51.3e-5250.73Show/hide
Query:  WDVLDNYSASSAPSLPRFEE------------LDTTNMLLRQRIVFLGSQVDDITADFIISQLLFLDAADPTKDIKLFINSPGGSVTAGMGIYDAMKLCK
        W + D+    S+P  P + +                + L + RI+  G  VDD  A+ I++QLL+LDA DPTKDI +++NSPGGSVTAGM I+D M+  +
Subjt:  WDVLDNYSASSAPSLPRFEE------------LDTTNMLLRQRIVFLGSQVDDITADFIISQLLFLDAADPTKDIKLFINSPGGSVTAGMGIYDAMKLCK

Query:  ADVSTVCLGLAASMGAFLLASGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLQQIEFDTDRDNFMNPWEAKEYGL
         DVSTVC+GLAASMGAFLL++G+KGKR+ +PN R+MIHQPLG A G  T++ I+  EM +HK  LN   +  TG+ L++I  DTDRD FM+  EAKEYGL
Subjt:  ADVSTVCLGLAASMGAFLLASGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLQQIEFDTDRDNFMNPWEAKEYGL

Query:  IDEVI
        ID VI
Subjt:  IDEVI

AT1G11750.1 CLP protease proteolytic subunit 61.9e-3541.38Show/hide
Query:  LDTTNMLLRQRIVFLGSQVDDITADFIISQLLFLDAADPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPN
        LD +++L R RI+F+G  ++   A  +ISQL+ L + D   DI +++N PGGS  + + IYD M   K  V TV  G+AAS GA LLA G KG R+ MPN
Subjt:  LDTTNMLLRQRIVFLGSQVDDITADFIISQLLFLDAADPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPN

Query:  GRVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLQQIEFDTDRDNFMNPWEAKEYGLIDEVID
         RVMIHQP    GG   ++  ++ E    + K++++++  TG+PL++++  T+RD F++  EA E+GLID +++
Subjt:  GRVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLQQIEFDTDRDNFMNPWEAKEYGLIDEVID

AT1G66670.1 CLP protease proteolytic subunit 33.4e-11769.4Show/hide
Query:  MELSFTYAPSPSPHRLMRFDHGFLSSHFPISTPSKHSHGGNSTSNAFRIRNSVPVVKPSLNSSSLRRTLSSNWDVLD---NYSASSAPSLPRFEELDTTN
        ME+S   A S + + +   + G  + +FPI      +H    TS  F +R+S+ + KP       R+TLSSNWDV     +  A S   LP FEELDTTN
Subjt:  MELSFTYAPSPSPHRLMRFDHGFLSSHFPISTPSKHSHGGNSTSNAFRIRNSVPVVKPSLNSSSLRRTLSSNWDVLD---NYSASSAPSLPRFEELDTTN

Query:  MLLRQRIVFLGSQVDDITADFIISQLLFLDAADPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNGRVMI
        MLLRQRIVFLGSQVDD+TAD +ISQLL LDA D  +DI LFINSPGGS+TAGMGIYDAMK CKADVSTVCLGLAASMGAFLLASGSKGKR+CMPN +VMI
Subjt:  MLLRQRIVFLGSQVDDITADFIISQLLFLDAADPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNGRVMI

Query:  HQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLQQIEFDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLVAPIAEATPPPKTRVWDLWKVEGSR
        HQPLGTAGGKATEMSIRIREM YHKIKLNKIFSRITGKP  +IE DTDRDNF+NPWEAKEYGLID VIDDGKPGL+API + TPPPKT+VWDLWKVEG++
Subjt:  HQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLQQIEFDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLVAPIAEATPPPKTRVWDLWKVEGSR

Query:  KAKKNLPSENKILQNGY
        K   NLPSE  + QNGY
Subjt:  KAKKNLPSENKILQNGY

AT5G23140.1 nuclear-encoded CLP protease P73.0e-4144.25Show/hide
Query:  DTTNMLLRQRIVFLGSQVDDITADFIISQLLFLDAADPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNG
        D  + LL++RI+ +   ++D T+  +++QLL+L++ +P+K I +++NSPGG VTAG+ IYD M+  ++ +ST+CLG AASM + LLA+G+KG+R  +PN 
Subjt:  DTTNMLLRQRIVFLGSQVDDITADFIISQLLFLDAADPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNG

Query:  RVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLQQIEFDTDRDNFMNPWEAKEYGLIDEVIDD
         VMIHQP G   G+A +++I  +++      LN+++ + TG+PL  +  + DRD+FM P EAK +G+IDEVID+
Subjt:  RVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPLQQIEFDTDRDNFMNPWEAKEYGLIDEVIDD

AT5G45390.1 CLP protease P42.9e-5244.62Show/hide
Query:  SSHFPISTPSKHSHGGNSTSNAFRIRNSVPVVKPSLNSSSLRRTLSS--NWDVLDNYSASSAPSLPRFEELDTTNMLLRQRIVFLGSQVDDITADFIISQ
        SS  P    S+ +   +++S++F   N++ +    L S  LR T  S   +       + +  S  R  E D   +LLR+RIVFLGS +DD  AD I+SQ
Subjt:  SSHFPISTPSKHSHGGNSTSNAFRIRNSVPVVKPSLNSSSLRRTLSS--NWDVLDNYSASSAPSLPRFEELDTTNMLLRQRIVFLGSQVDDITADFIISQ

Query:  LLFLDAADPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMAYHK
        LL LDA DP KDIKLFINSPGGS++A M IYD ++L +ADVST+ LG+AAS  + +L +G+KGKRF MPN R+MIHQPLG A G+A ++ I+ +E+ ++K
Subjt:  LLFLDAADPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMAYHK

Query:  IKLNKIFSRITGKPLQQIEFDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLVAPIAEATPP
          +  I +  T +  +Q+  D DRD +M+P EA EYGLID VID      + P+ +   P
Subjt:  IKLNKIFSRITGKPLQQIEFDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLVAPIAEATPP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTTGAGTTTCACATACGCACCTTCTCCTTCGCCTCATAGGCTTATGCGCTTCGACCATGGATTTCTATCTTCTCACTTTCCAATTTCTACTCCTTCGAAGCACTC
CCATGGCGGCAATTCCACTTCAAATGCTTTTAGAATCAGAAATTCGGTTCCGGTAGTAAAGCCCTCGCTTAATTCCTCTTCTCTCAGACGGACCTTATCCAGTAATTGGG
ATGTTTTGGACAACTATTCTGCATCTTCCGCTCCATCGCTGCCTCGATTCGAAGAGCTTGACACTACCAACATGCTTCTCCGCCAGCGAATCGTCTTCTTGGGTTCTCAG
GTTGATGACATAACGGCAGATTTCATCATAAGCCAACTACTCTTTCTTGATGCTGCAGACCCAACGAAAGATATTAAATTGTTTATCAACTCACCTGGTGGCTCTGTCAC
TGCTGGAATGGGAATATATGATGCAATGAAGTTGTGCAAGGCTGATGTTTCAACTGTTTGTCTGGGACTGGCTGCATCCATGGGAGCATTTCTTCTAGCTTCTGGTTCCA
AGGGAAAGCGATTCTGCATGCCCAATGGAAGAGTGATGATCCATCAACCTCTTGGAACAGCTGGAGGAAAAGCAACTGAGATGAGCATACGGATACGAGAAATGGCGTAT
CACAAGATTAAGCTAAACAAAATTTTTTCTAGAATAACAGGAAAGCCACTACAGCAGATTGAATTCGACACAGATCGTGATAATTTTATGAATCCTTGGGAAGCTAAGGA
ATATGGTTTGATCGATGAAGTTATTGATGATGGGAAGCCTGGACTTGTTGCTCCAATTGCAGAGGCAACTCCTCCACCGAAAACCCGAGTTTGGGATCTATGGAAGGTTG
AAGGGAGTCGGAAAGCCAAGAAGAATTTGCCTTCAGAAAACAAGATTTTGCAGAATGGATATCAAGGGGGTCAAGGAAGTGACGAGGAGCGTGGTAGCCAGCAGGAAACA
GAAAAACCGAGTCCTGTATGA
mRNA sequenceShow/hide mRNA sequence
GAAAACACATCATATATTAGTAGAGGATTTCTTGTGGGCGCTTCCCTTTCATCTTAGAGAGTAGAGGGAAATAGAGAAAATGGAGTTGAGTTTCACATACGCACCTTCTC
CTTCGCCTCATAGGCTTATGCGCTTCGACCATGGATTTCTATCTTCTCACTTTCCAATTTCTACTCCTTCGAAGCACTCCCATGGCGGCAATTCCACTTCAAATGCTTTT
AGAATCAGAAATTCGGTTCCGGTAGTAAAGCCCTCGCTTAATTCCTCTTCTCTCAGACGGACCTTATCCAGTAATTGGGATGTTTTGGACAACTATTCTGCATCTTCCGC
TCCATCGCTGCCTCGATTCGAAGAGCTTGACACTACCAACATGCTTCTCCGCCAGCGAATCGTCTTCTTGGGTTCTCAGGTTGATGACATAACGGCAGATTTCATCATAA
GCCAACTACTCTTTCTTGATGCTGCAGACCCAACGAAAGATATTAAATTGTTTATCAACTCACCTGGTGGCTCTGTCACTGCTGGAATGGGAATATATGATGCAATGAAG
TTGTGCAAGGCTGATGTTTCAACTGTTTGTCTGGGACTGGCTGCATCCATGGGAGCATTTCTTCTAGCTTCTGGTTCCAAGGGAAAGCGATTCTGCATGCCCAATGGAAG
AGTGATGATCCATCAACCTCTTGGAACAGCTGGAGGAAAAGCAACTGAGATGAGCATACGGATACGAGAAATGGCGTATCACAAGATTAAGCTAAACAAAATTTTTTCTA
GAATAACAGGAAAGCCACTACAGCAGATTGAATTCGACACAGATCGTGATAATTTTATGAATCCTTGGGAAGCTAAGGAATATGGTTTGATCGATGAAGTTATTGATGAT
GGGAAGCCTGGACTTGTTGCTCCAATTGCAGAGGCAACTCCTCCACCGAAAACCCGAGTTTGGGATCTATGGAAGGTTGAAGGGAGTCGGAAAGCCAAGAAGAATTTGCC
TTCAGAAAACAAGATTTTGCAGAATGGATATCAAGGGGGTCAAGGAAGTGACGAGGAGCGTGGTAGCCAGCAGGAAACAGAAAAACCGAGTCCTGTATGACACAAGACTT
CACCCGTTCCTCTTCTTCCTACATCCCTCTGCCTCTATGGTTGTATCCTAGCTTGTTCTTTCCATTCTCAAATAGCTCTCTCTGTAAGATATTAAAGGTGATTATTTACC
AACCAGTTGAACAAGTATAGGTTTTGGAAAATTCAAGAGTCCTTCTCTCCCCTTGTCTAGATGCTAAAGTATTGCTTGAGTTGATATTGAATCTGTCTCGAAACCTCGGC
TCAAATGTGCAACGGACCACCAATGCTCATGATTCTGAGTAAGTTGCTGCAAACTTGAATGGGAAGTTTCTATGAGTTTTGTAGGTCTCTCTCTGGTAGGTTGAGATTTT
GATTAAGATGGAAGGCAGGTGATAATGTTTGAATTCAAGATAGTCATGCAATGCATTGCTAAATAGGAAGTGTTTTTACCTCTTGTGTGGAAGATTAGGATGCTGCTGTT
GCATGTTATAACTTACAGTTGGAGTTCAGTATTGAGGCTATTTGATGCATATACACTCTGAGATGGCATTACCATCAATATATTTCTAAGAAAGAGAAAAAAAATTAATA
ATAATAAATTTTTAGTGGC
Protein sequenceShow/hide protein sequence
MELSFTYAPSPSPHRLMRFDHGFLSSHFPISTPSKHSHGGNSTSNAFRIRNSVPVVKPSLNSSSLRRTLSSNWDVLDNYSASSAPSLPRFEELDTTNMLLRQRIVFLGSQ
VDDITADFIISQLLFLDAADPTKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMAY
HKIKLNKIFSRITGKPLQQIEFDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLVAPIAEATPPPKTRVWDLWKVEGSRKAKKNLPSENKILQNGYQGGQGSDEERGSQQET
EKPSPV