CuGenDBv2

Gene ID	CaUC05G092990
Organism	Citrullus amarus (Watermelon (USVL246-FR2) v1)
Description	Photosystem I P700 chlorophyll a apoprotein A1
Genome location	Ciama_Chr05:18051828..18054099
RNA-Seq Expression	CaUC05G092990
Synteny	CaUC05G092990
Gene Ontology terms	GO:0015979 - photosynthesis (biological process) GO:0018298 - protein-chromophore linkage (biological process) GO:0022900 - electron transport chain (biological process) GO:0009522 - photosystem I (cellular component) GO:0009535 - chloroplast thylakoid membrane (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0000287 - magnesium ion binding (molecular function) GO:0009055 - electron transfer activity (molecular function) GO:0016168 - chlorophyll binding (molecular function) GO:0051539 - 4 iron, 4 sulfur cluster binding (molecular function)
InterPro domains	IPR001280 - Photosystem I PsaA/PsaB IPR006243 - Photosystem I PsaA IPR036408 - Photosystem I PsaA/PsaB superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

PHT45140.1 Photosystem I chlorophyll a apoprotein A1 [Capsicum baccatum]

2.3e-43

95.6

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Query:  GLYEILTMPWHAQLSINLAMLGSLTIIVAHHMYVMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDLLDRV
        GLYEILTM WHAQLS+NLAMLGSLTI+VAHHMY MPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDLLDRV
Subjt:  GLYEILTMPWHAQLSINLAMLGSLTIIVAHHMYVMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDLLDRV

QFQ47127.1 photosystem I P700 apoprotein A1 [Allomorphia sp. Liu 681]

1.4e-43

77.59

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Query:  GLYEILTMPWHAQLSINLAMLGSLTIIVAHHMYVMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDLLDRVXN-----LA
        GLYEILTM WHAQLS+NLAMLGSLTI+VAHHMY MPPYPYLATDYGTQLSLFTHHMWIGGFL+VGAAAHAAIFMVRDYDPTTRYNDLLDRV       +A
Subjt:  GLYEILTMPWHAQLSINLAMLGSLTIIVAHHMYVMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDLLDRVXN-----LA

Query:  MLGSLTIIVAHHMYAM
         L  + I +  H + +
Subjt:  MLGSLTIIVAHHMYAM

RYR42403.1 hypothetical protein Ahy_A08g038876 [Arachis hypogaea]

4.9e-49

51.08

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Query:  GLYEILTMPWHAQLSINLAMLGSLTIIVAHHMYVMPPYPYLATDYGTQLSLFTHHMWIGGFLI-------------VGAA--------------------
        GLYEILT  WHAQLSINLAMLGSLTI+VAHHMY MPPYPYLATDYGTQLSLFTHHMWIGGFL+              GA                     
Subjt:  GLYEILTMPWHAQLSINLAMLGSLTIIVAHHMYVMPPYPYLATDYGTQLSLFTHHMWIGGFLI-------------VGAA--------------------

Query:  -----------------AHAAIFMVRDYDPTTRY------NDLLDR-------------------------VXNLAMLGSLTIIVAHHMYAMPPYPYLAT
                         A A +F++  +   T +       ++L+                            NLAMLGSLTI+VAHHMY+MPPYPYLAT
Subjt:  -----------------AHAAIFMVRDYDPTTRY------NDLLDR-------------------------VXNLAMLGSLTIIVAHHMYAMPPYPYLAT

Query:  DYGTQLSLFTHHMWIGGFLVVGSAVHAAIFM
        DYGTQLSLFTHHMWIGGFL+VG+A HAAIFM
Subjt:  DYGTQLSLFTHHMWIGGFLVVGSAVHAAIFM

RYR67224.1 hypothetical protein Ahy_A03g013526 [Arachis hypogaea]

4.9e-49

51.08

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Query:  GLYEILTMPWHAQLSINLAMLGSLTIIVAHHMYVMPPYPYLATDYGTQLSLFTHHMWIGGFLI-------------VGAA--------------------
        GLYEILT  WHAQLSINLAMLGSLTI+VAHHMY MPPYPYLATDYGTQLSLFTHHMWIGGFL+              GA                     
Subjt:  GLYEILTMPWHAQLSINLAMLGSLTIIVAHHMYVMPPYPYLATDYGTQLSLFTHHMWIGGFLI-------------VGAA--------------------

Query:  -----------------AHAAIFMVRDYDPTTRY------NDLLDR-------------------------VXNLAMLGSLTIIVAHHMYAMPPYPYLAT
                         A A +F++  +   T +       ++L+                            NLAMLGSLTI+VAHHMY+MPPYPYLAT
Subjt:  -----------------AHAAIFMVRDYDPTTRY------NDLLDR-------------------------VXNLAMLGSLTIIVAHHMYAMPPYPYLAT

Query:  DYGTQLSLFTHHMWIGGFLVVGSAVHAAIFM
        DYGTQLSLFTHHMWIGGFL+VG+A HAAIFM
Subjt:  DYGTQLSLFTHHMWIGGFLVVGSAVHAAIFM

YP_010022036.1 photosystem I P700 apoprotein A1 [Helianthemum songaricum]

2.3e-43

95.6

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Query:  GLYEILTMPWHAQLSINLAMLGSLTIIVAHHMYVMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDLLDRV
        GLYEILTM WHAQLS+NLAMLGSLTI+VAHHMY MPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDLLDRV
Subjt:  GLYEILTMPWHAQLSINLAMLGSLTIIVAHHMYVMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDLLDRV

TrEMBL top hits

e value

%identity

Alignment

A0A2G2WJ17 Photosystem I chlorophyll a apoprotein A1

1.1e-43

95.6

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Query:  GLYEILTMPWHAQLSINLAMLGSLTIIVAHHMYVMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDLLDRV
        GLYEILTM WHAQLS+NLAMLGSLTI+VAHHMY MPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDLLDRV
Subjt:  GLYEILTMPWHAQLSINLAMLGSLTIIVAHHMYVMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDLLDRV

A0A445BUM3 Photosystem I P700 chlorophyll a apoprotein A1

2.3e-49

51.08

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Query:  GLYEILTMPWHAQLSINLAMLGSLTIIVAHHMYVMPPYPYLATDYGTQLSLFTHHMWIGGFLI-------------VGAA--------------------
        GLYEILT  WHAQLSINLAMLGSLTI+VAHHMY MPPYPYLATDYGTQLSLFTHHMWIGGFL+              GA                     
Subjt:  GLYEILTMPWHAQLSINLAMLGSLTIIVAHHMYVMPPYPYLATDYGTQLSLFTHHMWIGGFLI-------------VGAA--------------------

Query:  -----------------AHAAIFMVRDYDPTTRY------NDLLDR-------------------------VXNLAMLGSLTIIVAHHMYAMPPYPYLAT
                         A A +F++  +   T +       ++L+                            NLAMLGSLTI+VAHHMY+MPPYPYLAT
Subjt:  -----------------AHAAIFMVRDYDPTTRY------NDLLDR-------------------------VXNLAMLGSLTIIVAHHMYAMPPYPYLAT

Query:  DYGTQLSLFTHHMWIGGFLVVGSAVHAAIFM
        DYGTQLSLFTHHMWIGGFL+VG+A HAAIFM
Subjt:  DYGTQLSLFTHHMWIGGFLVVGSAVHAAIFM

A0A445DVL3 Photosystem I P700 chlorophyll a apoprotein A1

2.3e-49

51.08

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Query:  GLYEILTMPWHAQLSINLAMLGSLTIIVAHHMYVMPPYPYLATDYGTQLSLFTHHMWIGGFLI-------------VGAA--------------------
        GLYEILT  WHAQLSINLAMLGSLTI+VAHHMY MPPYPYLATDYGTQLSLFTHHMWIGGFL+              GA                     
Subjt:  GLYEILTMPWHAQLSINLAMLGSLTIIVAHHMYVMPPYPYLATDYGTQLSLFTHHMWIGGFLI-------------VGAA--------------------

Query:  -----------------AHAAIFMVRDYDPTTRY------NDLLDR-------------------------VXNLAMLGSLTIIVAHHMYAMPPYPYLAT
                         A A +F++  +   T +       ++L+                            NLAMLGSLTI+VAHHMY+MPPYPYLAT
Subjt:  -----------------AHAAIFMVRDYDPTTRY------NDLLDR-------------------------VXNLAMLGSLTIIVAHHMYAMPPYPYLAT

Query:  DYGTQLSLFTHHMWIGGFLVVGSAVHAAIFM
        DYGTQLSLFTHHMWIGGFL+VG+A HAAIFM
Subjt:  DYGTQLSLFTHHMWIGGFLVVGSAVHAAIFM

A0A5P8GXI8 Photosystem I P700 chlorophyll a apoprotein A1

6.6e-44

77.59

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Query:  GLYEILTMPWHAQLSINLAMLGSLTIIVAHHMYVMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDLLDRVXN-----LA
        GLYEILTM WHAQLS+NLAMLGSLTI+VAHHMY MPPYPYLATDYGTQLSLFTHHMWIGGFL+VGAAAHAAIFMVRDYDPTTRYNDLLDRV       +A
Subjt:  GLYEILTMPWHAQLSINLAMLGSLTIIVAHHMYVMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDLLDRVXN-----LA

Query:  MLGSLTIIVAHHMYAM
         L  + I +  H + +
Subjt:  MLGSLTIIVAHHMYAM

A0A5Q0UVL5 Photosystem I P700 chlorophyll a apoprotein A1

1.1e-43

69.4

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Query:  GLYEILTMPWHAQLSINLAMLGSLTIIVAHHMYVMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDLLDRVXN-----LA
        GLYEILT  WHAQLSINLAMLGSLTI+VAHHMY MPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDLLDRV       ++
Subjt:  GLYEILTMPWHAQLSINLAMLGSLTIIVAHHMYVMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDLLDRVXN-----LA

Query:  MLGSLTIIVAHHMYAMPPYPYLATDYGTQLSLFT
         L  + I +  H + +  Y    +  G    +F+
Subjt:  MLGSLTIIVAHHMYAMPPYPYLATDYGTQLSLFT

SwissProt top hits

e value

%identity

Alignment

P58310 Photosystem I P700 chlorophyll a apoprotein A1

6.8e-46

78.45

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Query:  GLYEILTMPWHAQLSINLAMLGSLTIIVAHHMYVMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDLLDRVXN-----LA
        GLYEILT  WHAQLSINLAMLGSLTIIVAHHMY MPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDLLDRV       ++
Subjt:  GLYEILTMPWHAQLSINLAMLGSLTIIVAHHMYVMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDLLDRVXN-----LA

Query:  MLGSLTIIVAHHMYAM
         L  + I +  H + +
Subjt:  MLGSLTIIVAHHMYAM

Q14FF7 Photosystem I P700 chlorophyll a apoprotein A1

8.9e-46

76.72

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Query:  GLYEILTMPWHAQLSINLAMLGSLTIIVAHHMYVMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDLLDRVXN-----LA
        GLYEILT  WHAQLS+NLAMLGSLTI+VAHHMY MPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDLLDRV       ++
Subjt:  GLYEILTMPWHAQLSINLAMLGSLTIIVAHHMYVMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDLLDRVXN-----LA

Query:  MLGSLTIIVAHHMYAM
         L  + I +  H + +
Subjt:  MLGSLTIIVAHHMYAM

Q1KXV9 Photosystem I P700 chlorophyll a apoprotein A1

8.9e-46

94.51

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Query:  GLYEILTMPWHAQLSINLAMLGSLTIIVAHHMYVMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDLLDRV
        GLYEILT  WHAQLS+NLAMLGSLTI+VAHHMY MPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDLLDRV
Subjt:  GLYEILTMPWHAQLSINLAMLGSLTIIVAHHMYVMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDLLDRV

Q2QD89 Photosystem I P700 chlorophyll a apoprotein A1

4.0e-46

78.45

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Query:  GLYEILTMPWHAQLSINLAMLGSLTIIVAHHMYVMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDLLDRVXN-----LA
        GLYEILT  WHAQLSINLAMLGSLTIIVAHHMY MPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDLLDRV       ++
Subjt:  GLYEILTMPWHAQLSINLAMLGSLTIIVAHHMYVMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDLLDRVXN-----LA

Query:  MLGSLTIIVAHHMYAM
         L  + I +  H + +
Subjt:  MLGSLTIIVAHHMYAM

Q332X8 Photosystem I P700 chlorophyll a apoprotein A1

8.9e-46

94.51

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Query:  GLYEILTMPWHAQLSINLAMLGSLTIIVAHHMYVMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDLLDRV
        GLYEILT  WHAQLS+NLAMLGSLTI+VAHHMY MPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDLLDRV
Subjt:  GLYEILTMPWHAQLSINLAMLGSLTIIVAHHMYVMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDLLDRV

Arabidopsis top hits

e value

%identity

Alignment

ATCG00340.1 Photosystem I, PsaA/PsaB protein

3.0e-20

42.73

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Query:  GLYEILTMPWHAQLSINLAMLGSLTIIVAHHMYVMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDLLDRVXNLAMLGSL
        GLY+ +    H QL + LA LG +T +VA HMY +P Y ++A D+ TQ +L+THH +I GF++ GA AH AIF +RDY+P    +++L R     ML   
Subjt:  GLYEILTMPWHAQLSINLAMLGSLTIIVAHHMYVMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDLLDRVXNLAMLGSL

Query:  TIIVAHHMYA
          I++H  +A
Subjt:  TIIVAHHMYA

ATCG00350.1 Photosystem I, PsaA/PsaB protein

1.6e-45

75.86

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Query:  GLYEILTMPWHAQLSINLAMLGSLTIIVAHHMYVMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDLLDRVXN-----LA
        GLYEILT  WHAQLS+NLAMLGSLTIIVAHHMY MPPYPYLATDY TQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPT RYNDLLDRV       ++
Subjt:  GLYEILTMPWHAQLSINLAMLGSLTIIVAHHMYVMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDLLDRVXN-----LA

Query:  MLGSLTIIVAHHMYAM
         L  + I +  H + +
Subjt:  MLGSLTIIVAHHMYAM

Sequences

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CDS sequence

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ATGGGACTATACGAGATCCTAACAATGCCATGGCATGCTCAATTATCTATTAATCTAGCTATGTTAGGCTCTTTAACCATTATTGTAGCTCACCATATGTATGTG
ATGCCCCCTTATCCATATCTAGCTACTGACTATGGTACACAACTTTCATTGTTCACACATCACATGTGGATTGGTGGATTTCTCATAGTTGGTGCTGCTGCGCAT
GCAGCCATTTTTATGGTAAGAGACTATGATCCAACTACTCGCTACAACGATCTATTAGATCGTGTANTTAATCTAGCTATGTTAGGCTCTTTAACCATTATTGTA
GCTCACCATATGTATGCGATGCCCCCTTATCCATATCTAGCTACTGACTATGGTACACAACTTTCATTGTTCACACATCACATGTGGATTGGTGGATTTCTCGTA
GTTGGTTCTGCTGTGCATGCCGCCATTTTTATG

mRNA sequence

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Protein sequence

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MGLYEILTMPWHAQLSINLAMLGSLTIIVAHHMYVMPPYPYLATDYGTQLSLFTHHMWIGGFLIVGAAAHAAIFMVRDYDPTTRYNDLLDRVXNLAMLGSLTIIV
AHHMYAMPPYPYLATDYGTQLSLFTHHMWIGGFLVVGSAVHAAIFM

CaUC05G092990 (gene) of Watermelon (USVL246-FR2) v1 genome