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CaUC05G093080 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC05G093080
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
Descriptionserine/threonine-protein phosphatase 7 long form homolog
Genome locationCiama_Chr05:18361269..18368935
RNA-Seq ExpressionCaUC05G093080
SyntenyCaUC05G093080
Gene Ontology termsGO:0010073 - meristem maintenance (biological process)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038951.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]1.1e-0475Show/hide
Query:  RKKASKWRDQFWVTRSATHVVSQYRYMLDLLQSDQI
        R   S+W+DQF VTR ATHVVSQYRYM DLLQ DQI
Subjt:  RKKASKWRDQFWVTRSATHVVSQYRYMLDLLQSDQI
KAA0055624.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]4.7e-0577.78Show/hide
Query:  RKKASKWRDQFWVTRSATHVVSQYRYMLDLLQSDQI
        R   S+WRDQF VTRSATHVVSQYRYM DLLQ  QI
Subjt:  RKKASKWRDQFWVTRSATHVVSQYRYMLDLLQSDQI
KAA0067080.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]4.7e-0577.78Show/hide
Query:  RKKASKWRDQFWVTRSATHVVSQYRYMLDLLQSDQI
        R   S+WRDQF VTRSATHVVSQYRYM DLLQ  QI
Subjt:  RKKASKWRDQFWVTRSATHVVSQYRYMLDLLQSDQI
TYJ95836.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]4.7e-0577.78Show/hide
Query:  RKKASKWRDQFWVTRSATHVVSQYRYMLDLLQSDQI
        R   S+WRDQF VTRSATHVVSQYRYM DLLQ  QI
Subjt:  RKKASKWRDQFWVTRSATHVVSQYRYMLDLLQSDQI
XP_016901944.1 PREDICTED: serine/threonine-protein phosphatase 7 long form homolog [Cucumis melo]4.7e-0577.78Show/hide
Query:  RKKASKWRDQFWVTRSATHVVSQYRYMLDLLQSDQI
        R   S+WRDQF VTRSATHVVSQYRYM DLLQ  QI
Subjt:  RKKASKWRDQFWVTRSATHVVSQYRYMLDLLQSDQI
TrEMBL top hitse value%identityAlignment
A0A1S4E141 serine/threonine-protein phosphatase 7 long form homolog2.3e-0577.78Show/hide
Query:  RKKASKWRDQFWVTRSATHVVSQYRYMLDLLQSDQI
        R   S+WRDQF VTRSATHVVSQYRYM DLLQ  QI
Subjt:  RKKASKWRDQFWVTRSATHVVSQYRYMLDLLQSDQI
A0A5A7TBF8 Mediator of RNA polymerase II transcription subunit 12-like isoform X15.1e-0575Show/hide
Query:  RKKASKWRDQFWVTRSATHVVSQYRYMLDLLQSDQI
        R   S+W+DQF VTR ATHVVSQYRYM DLLQ DQI
Subjt:  RKKASKWRDQFWVTRSATHVVSQYRYMLDLLQSDQI
A0A5A7UKC7 Serine/threonine-protein phosphatase 7 long form-like protein2.3e-0577.78Show/hide
Query:  RKKASKWRDQFWVTRSATHVVSQYRYMLDLLQSDQI
        R   S+WRDQF VTRSATHVVSQYRYM DLLQ  QI
Subjt:  RKKASKWRDQFWVTRSATHVVSQYRYMLDLLQSDQI
A0A5A7VIP6 Mediator of RNA polymerase II transcription subunit 12-like isoform X12.3e-0577.78Show/hide
Query:  RKKASKWRDQFWVTRSATHVVSQYRYMLDLLQSDQI
        R   S+WRDQF VTRSATHVVSQYRYM DLLQ  QI
Subjt:  RKKASKWRDQFWVTRSATHVVSQYRYMLDLLQSDQI
A0A5D3BAB0 Serine/threonine-protein phosphatase 7 long form-like protein2.3e-0577.78Show/hide
Query:  RKKASKWRDQFWVTRSATHVVSQYRYMLDLLQSDQI
        R   S+WRDQF VTRSATHVVSQYRYM DLLQ  QI
Subjt:  RKKASKWRDQFWVTRSATHVVSQYRYMLDLLQSDQI
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAGTAAGACTCTCTACATGGGTTGGTGATGACGTGGAGGAATGTGAACCGTCAAAAGGAGTGACAGCGTGGACCAATCTTCGAACACTCATATTTGCCGCCATGGG
AGCGTGGGCGTGTGTCTTCCATAAACTCCATTCCTTCGACCAACGCAAGGCCTATTCGACCAACGCAAGGCCTGCTTCGACCAACGCATGGCCTGCTTCGGCTAACGCAT
GGAGGCCTCAACCTTTGACCAACGCAAGGCCTACCTTCGACCAACGCAAGAAGGCCTCAAAGTGGAGAGACCAATTTTGGGTAACTCGGTCAGCTACACATGTAGTGAGT
CAGTATAGATATATGCTTGATCTGCTTCAATCTGACCAGATATGTGAATACTAA
mRNA sequenceShow/hide mRNA sequence
ATGCAAGTAAGACTCTCTACATGGGTTGGTGATGACGTGGAGGAATGTGAACCGTCAAAAGGAGTGACAGCGTGGACCAATCTTCGAACACTCATATTTGCCGCCATGGG
AGCGTGGGCGTGTGTCTTCCATAAACTCCATTCCTTCGACCAACGCAAGGCCTATTCGACCAACGCAAGGCCTGCTTCGACCAACGCATGGCCTGCTTCGGCTAACGCAT
GGAGGCCTCAACCTTTGACCAACGCAAGGCCTACCTTCGACCAACGCAAGAAGGCCTCAAAGTGGAGAGACCAATTTTGGGTAACTCGGTCAGCTACACATGTAGTGAGT
CAGTATAGATATATGCTTGATCTGCTTCAATCTGACCAGATATGTGAATACTAA
Protein sequenceShow/hide protein sequence
MQVRLSTWVGDDVEECEPSKGVTAWTNLRTLIFAAMGAWACVFHKLHSFDQRKAYSTNARPASTNAWPASANAWRPQPLTNARPTFDQRKKASKWRDQFWVTRSATHVVS
QYRYMLDLLQSDQICEY