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CaUC05G093090 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC05G093090
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionAvrRpt-cleavage domain-containing protein
Genome locationCiama_Chr05:18373518..18374248
RNA-Seq ExpressionCaUC05G093090
SyntenyCaUC05G093090
Gene Ontology termsGO:0005886 - plasma membrane (cellular component)
InterPro domainsIPR008700 - RIN4, pathogenic type III effector avirulence factor Avr cleavage site
IPR040387 - RPM1-interacting protein 4/NOI4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0066959.1 RPM1-interacting protein 4-like [Cucumis melo var. makuwa]2.6e-2493.75Show/hide
Query:  DSRDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEASGNTAAKNNTSRPEENYQYSPM
        DS+DKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEA GNTAAK+NTSR EENYQYSPM
Subjt:  DSRDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEASGNTAAKNNTSRPEENYQYSPM

KAG7017799.1 RPM1-interacting protein 4, partial [Cucurbita argyrosperma subsp. argyrosperma]3.5e-2495.16Show/hide
Query:  DKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEASGNTAAKNNTSRPEENYQYSPMV
        D+GRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEA GNTAAKNN SRPEENYQYSPMV
Subjt:  DKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEASGNTAAKNNTSRPEENYQYSPMV

KAG7022694.1 hypothetical protein SDJN02_16428, partial [Cucurbita argyrosperma subsp. argyrosperma]4.4e-3576.19Show/hide
Query:  RDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEASGNTAAKNNTSRPEENYQYSPM----VRIYYKFLCLDAEKMVLLFLKLLGSDGGGDNRHG
        +DKGRPLPKFGEWDVNNPASAEGFTVIFSKAR+EKKSNEASGN AAKNN   PEENYQYSPM    + +++       EKMVLL LKL+GSDGGGDNRHG
Subjt:  RDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEASGNTAAKNNTSRPEENYQYSPM----VRIYYKFLCLDAEKMVLLFLKLLGSDGGGDNRHG

Query:  ERRLK
        ERR+K
Subjt:  ERRLK

XP_038883812.1 protein NOI4-like isoform X1 [Benincasa hispida]2.6e-2486.96Show/hide
Query:  RDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEASGNTAAKNNTSRPEENYQYSPMVRIYYKF
        +DKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEA GNT AKNNTSRPEENYQYSPM + +  F
Subjt:  RDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEASGNTAAKNNTSRPEENYQYSPMVRIYYKF

XP_038883820.1 protein NOI4-like isoform X2 [Benincasa hispida]2.6e-2486.96Show/hide
Query:  RDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEASGNTAAKNNTSRPEENYQYSPMVRIYYKF
        +DKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEA GNT AKNNTSRPEENYQYSPM + +  F
Subjt:  RDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEASGNTAAKNNTSRPEENYQYSPMVRIYYKF

TrEMBL top hitse value%identityAlignment
A0A0A0LDP9 AvrRpt-cleavage domain-containing protein1.9e-2386.76Show/hide
Query:  DKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEASGNTAAKNNTSRPEENYQYSPMVRIYYKF
        DKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEA GNTAAK+NTSR EENYQYSPM + +  F
Subjt:  DKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEASGNTAAKNNTSRPEENYQYSPMVRIYYKF

A0A5D3E371 RPM1-interacting protein 4-like1.3e-2493.75Show/hide
Query:  DSRDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEASGNTAAKNNTSRPEENYQYSPM
        DS+DKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEA GNTAAK+NTSR EENYQYSPM
Subjt:  DSRDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEASGNTAAKNNTSRPEENYQYSPM

A0A5J5AK52 AvrRpt-cleavage domain-containing protein4.9e-1667.61Show/hide
Query:  SRDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAS--GNTAAKN-NTSRPEENYQYSPMVRIYY
        S+DKGRPLPKFGEWDVNNPASA+GFTVIF+KARD+KK+N A+  G  + KN NTS+  ENYQY PM + ++
Subjt:  SRDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEAS--GNTAAKN-NTSRPEENYQYSPMVRIYY

A0A5J5BYY8 AvrRpt-cleavage domain-containing protein4.9e-1662.67Show/hide
Query:  SRDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEA-------SGNTAAKNNTSRPEENYQYSPMVRIYY
        S+DKGRPLPKFGEWDVNNPASA+GFTVIF+KARD+KK+N A        G    KN+ S+  ENYQYSPM + ++
Subjt:  SRDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEA-------SGNTAAKNNTSRPEENYQYSPMVRIYY

B9SLS6 NOI, putative1.1e-1575.81Show/hide
Query:  SRDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEASGNTAA---KNNTSRPEENYQ
        ++DKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSN A G  AA    NN  +P++NYQ
Subjt:  SRDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEASGNTAA---KNNTSRPEENYQ

SwissProt top hitse value%identityAlignment
O22633 Protein NOI43.2e-1280.95Show/hide
Query:  DKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEASGN
        DKGRPLPKFGEWDVN+PASAEGFTVIF+KARDEKK+    G+
Subjt:  DKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEASGN

Q8GYN5 RPM1-interacting protein 44.9e-0541.67Show/hide
Query:  EDSRDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSN-EASGNTAAKNNTSRPEEN
        ++S +K   +PKFG+WD NNP+SA+G+T IF+K R+E+ S    SG++    + S    N
Subjt:  EDSRDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSN-EASGNTAAKNNTSRPEEN

Arabidopsis top hitse value%identityAlignment
AT5G40645.1 RPM1-interacting protein 4 (RIN4) family protein6.5e-1362.3Show/hide
Query:  HEDSRDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEASGNTAAK---NNTSRPE
        ++  + + RPLPKFGEWDVN+PASAEGFTVIF+KARD+KK+N ASG  A++   NN S+ E
Subjt:  HEDSRDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEASGNTAAK---NNTSRPE

AT5G55850.1 RPM1-interacting protein 4 (RIN4) family protein2.2e-1380.95Show/hide
Query:  DKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEASGN
        DKGRPLPKFGEWDVN+PASAEGFTVIF+KARDEKK+    G+
Subjt:  DKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEASGN

AT5G55850.2 RPM1-interacting protein 4 (RIN4) family protein3.5e-1480Show/hide
Query:  DSRDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEASGN
        D RDKGRPLPKFGEWDVN+PASAEGFTVIF+KARDEKK+    G+
Subjt:  DSRDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEASGN

AT5G55850.3 RPM1-interacting protein 4 (RIN4) family protein3.5e-1480Show/hide
Query:  DSRDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEASGN
        D RDKGRPLPKFGEWDVN+PASAEGFTVIF+KARDEKK+    G+
Subjt:  DSRDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEASGN

AT5G63270.1 RPM1-interacting protein 4 (RIN4) family protein9.1e-1568.42Show/hide
Query:  SRDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEASGNTAAKNNTSRPEEN
        + +KG+PLPKFGEWDVNNPASAEGFTVIFSKA DEKK+ +ASG  A  N+   P+ N
Subjt:  SRDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEASGNTAAKNNTSRPEEN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTGCCTTGTTTGATATTGATACCCACATCAGCAGAAAATATTCCATTGCTTTCACAGAAATGCATGGCCAAAAGCAAATACAAGATAGGCACAGATCTACA
CATAAACATGGAGCATTCTGTGCAAGAGAAAAGTGCTCTTTTAAAAGCAATGGAAGAACTGACAAACATGAGGATTCACGTGATAAAGGTCGCCCCTTGCCGAAG
TTCGGCGAGTGGGATGTCAACAATCCAGCCTCCGCCGAAGGATTTACAGTAATATTTAGCAAAGCTAGAGATGAGAAGAAGTCAAATGAGGCTTCTGGGAACACA
GCAGCCAAAAACAATACATCCAGACCAGAAGAGAATTATCAATATTCTCCCATGGTAAGAATTTACTACAAATTTTTGTGCTTGGATGCAGAAAAAATGGTTTTG
CTGTTTCTGAAACTGCTAGGGAGTGATGGTGGTGGTGACAACAGACATGGTGAAAGAAGGCTAAAGAAAGATTTATGA
mRNA sequenceShow/hide mRNA sequence
ATGCCTGCCTTGTTTGATATTGATACCCACATCAGCAGAAAATATTCCATTGCTTTCACAGAAATGCATGGCCAAAAGCAAATACAAGATAGGCACAGATCTACA
CATAAACATGGAGCATTCTGTGCAAGAGAAAAGTGCTCTTTTAAAAGCAATGGAAGAACTGACAAACATGAGGATTCACGTGATAAAGGTCGCCCCTTGCCGAAG
TTCGGCGAGTGGGATGTCAACAATCCAGCCTCCGCCGAAGGATTTACAGTAATATTTAGCAAAGCTAGAGATGAGAAGAAGTCAAATGAGGCTTCTGGGAACACA
GCAGCCAAAAACAATACATCCAGACCAGAAGAGAATTATCAATATTCTCCCATGGTAAGAATTTACTACAAATTTTTGTGCTTGGATGCAGAAAAAATGGTTTTG
CTGTTTCTGAAACTGCTAGGGAGTGATGGTGGTGGTGACAACAGACATGGTGAAAGAAGGCTAAAGAAAGATTTATGA
Protein sequenceShow/hide protein sequence
MPALFDIDTHISRKYSIAFTEMHGQKQIQDRHRSTHKHGAFCAREKCSFKSNGRTDKHEDSRDKGRPLPKFGEWDVNNPASAEGFTVIFSKARDEKKSNEASGNT
AAKNNTSRPEENYQYSPMVRIYYKFLCLDAEKMVLLFLKLLGSDGGGDNRHGERRLKKDL