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CaUC05G093530 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC05G093530
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionUnknown protein
Genome locationCiama_Chr05:19832207..19836027
RNA-Seq ExpressionCaUC05G093530
SyntenyCaUC05G093530
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_020262796.1 zinc finger protein CONSTANS-LIKE 1-like [Asparagus officinalis]3.2e-0559.72Show/hide
Query:  WTPLIPSSIHSASSLRIAYVSSSAVTSPIAKSSLRSRFVQRLASSLWDSSVSSSSSSLSPSITSSSDLARQL
        WT L PS I SA S R A+ SS   TS IA+SS + RF  R  S LWDS  SSSSSS SPS TSSSDL   L
Subjt:  WTPLIPSSIHSASSLRIAYVSSSAVTSPIAKSSLRSRFVQRLASSLWDSSVSSSSSSLSPSITSSSDLARQL
TrEMBL top hitse value%identityAlignment
A0A0A0LXS8 Uncharacterized protein1.5e-1986.11Show/hide
Query:  SSLRSRFVQRLASSLWDSSVSSSSSSLSPSITSSSDLARQLRPQKEQAGHNRRRELDLLFQILTDVFINLKA
        SS RSRFVQRLASS WDS VSSSSSSLSPSITSSSDLARQLRPQKEQAG  RR ELD LFQILT+V INLK+
Subjt:  SSLRSRFVQRLASSLWDSSVSSSSSSLSPSITSSSDLARQLRPQKEQAGHNRRRELDLLFQILTDVFINLKA
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGCAAAACAAAGCAAACTGGATAACCCCGAACGGGACACGACCACGGCTCGTGACTCGTTAACTCAATTTGATCGTTTGTATGGAATCGTAGCTGACGAAGACGA
GCCGCACCGGCACCAGAAACAAAAATGGACGCCATTGATTCCGTCTTCGATCCACTCCGCGAGTTCGCTAAGGATAGCGTACGTCTCGTCAAGCGCTGTCACAAGCCCGA
TCGCAAAGAGTTCACTAAGGTCGCGGTTCGTACAGCGATTGGCTTCGTCGTTATGGGATTCGTCGGTTTCTTCGTCAAGCTCATCTTTATCCCCATCAATAACATCATCG
TCGGATCTGGCTAGACAGCTGAGGCCACAAAAAGAGCAGGCTGGACATAATAGAAGAAGGGAACTTGATCTACTATTTCAAATCCTTACTGATGTTTTTATTAATTTAAA
AGCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGCAAAACAAAGCAAACTGGATAACCCCGAACGGGACACGACCACGGCTCGTGACTCGTTAACTCAATTTGATCGTTTGTATGGAATCGTAGCTGACGAAGACGA
GCCGCACCGGCACCAGAAACAAAAATGGACGCCATTGATTCCGTCTTCGATCCACTCCGCGAGTTCGCTAAGGATAGCGTACGTCTCGTCAAGCGCTGTCACAAGCCCGA
TCGCAAAGAGTTCACTAAGGTCGCGGTTCGTACAGCGATTGGCTTCGTCGTTATGGGATTCGTCGGTTTCTTCGTCAAGCTCATCTTTATCCCCATCAATAACATCATCG
TCGGATCTGGCTAGACAGCTGAGGCCACAAAAAGAGCAGGCTGGACATAATAGAAGAAGGGAACTTGATCTACTATTTCAAATCCTTACTGATGTTTTTATTAATTTAAA
AGCTTAA
Protein sequenceShow/hide protein sequence
MEAKQSKLDNPERDTTTARDSLTQFDRLYGIVADEDEPHRHQKQKWTPLIPSSIHSASSLRIAYVSSSAVTSPIAKSSLRSRFVQRLASSLWDSSVSSSSSSLSPSITSS
SDLARQLRPQKEQAGHNRRRELDLLFQILTDVFINLKA