; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CaUC05G093670 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC05G093670
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionTubulin glycylase
Genome locationCiama_Chr05:20849031..20857274
RNA-Seq ExpressionCaUC05G093670
SyntenyCaUC05G093670
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060329.1 uncharacterized protein E6C27_scaffold22G001140 [Cucumis melo var. makuwa]1.8e-8192.59Show/hide
Query:  GEKVGMAMEGVASLALLPCGSVSGHFIQLPDSICYGLHGTELECERECSRGEDYRLIKLTIMNYSNKQERTVVVECRGHDAARFHSIVHAHGWEEDVVSM
        G+KVGMAMEGVAS+ALLPCGSVSGHFIQLP SICYGLHGTELECERECSRGEDYRLIKLTI NY+ KQERTVVVECRGHDAARFHSIVHAHGWEEDVVSM
Subjt:  GEKVGMAMEGVASLALLPCGSVSGHFIQLPDSICYGLHGTELECERECSRGEDYRLIKLTIMNYSNKQERTVVVECRGHDAARFHSIVHAHGWEEDVVSM

Query:  VEKKHGKNEIMVSFECQMLKSEKAAEDHIKQFIPKLVGQDAVVNIGPMSIRGLDFEAEEPGE
        VEKKHGKNEIMVSFECQMLKSEKAAEDHI+QF+PKLVGQDAVVN+GPMSI GLDFEAEE  E
Subjt:  VEKKHGKNEIMVSFECQMLKSEKAAEDHIKQFIPKLVGQDAVVNIGPMSIRGLDFEAEEPGE

XP_004149842.1 uncharacterized protein LOC101206322 isoform X1 [Cucumis sativus]4.5e-8094.3Show/hide
Query:  MAMEGVASLALLPCGSVSGHFIQLPDSICYGLHGTELECERECSRGEDYRLIKLTIMNYSNKQERTVVVECRGHDAARFHSIVHAHGWEEDVVSMVEKKH
        MAMEGVAS+ALLPCGSVSGHFIQLP SICYGLHGTELECERECSRGEDYRLIKLTI NY+NKQERTVVVECRGHDAARFHSIVHAHGWEEDVVSMVEKKH
Subjt:  MAMEGVASLALLPCGSVSGHFIQLPDSICYGLHGTELECERECSRGEDYRLIKLTIMNYSNKQERTVVVECRGHDAARFHSIVHAHGWEEDVVSMVEKKH

Query:  GKNEIMVSFECQMLKSEKAAEDHIKQFIPKLVGQDAVVNIGPMSIRGLDFEAEE-PGE
        GKNEIMVSFECQMLKSEKAAEDHI+QF+PKLVGQDAVVN+GPMSI GLDFEAEE PGE
Subjt:  GKNEIMVSFECQMLKSEKAAEDHIKQFIPKLVGQDAVVNIGPMSIRGLDFEAEE-PGE

XP_008450156.1 PREDICTED: uncharacterized protein LOC103491830 [Cucumis melo]5.8e-8093.63Show/hide
Query:  MAMEGVASLALLPCGSVSGHFIQLPDSICYGLHGTELECERECSRGEDYRLIKLTIMNYSNKQERTVVVECRGHDAARFHSIVHAHGWEEDVVSMVEKKH
        MAMEGVAS+ALLPCGSVSGHFIQLP SICYGLHGTELECERECSRGEDYRLIKLTI NY+NKQERTVVVECRGHDAARFHSIVHAHGWEEDVVSMVE KH
Subjt:  MAMEGVASLALLPCGSVSGHFIQLPDSICYGLHGTELECERECSRGEDYRLIKLTIMNYSNKQERTVVVECRGHDAARFHSIVHAHGWEEDVVSMVEKKH

Query:  GKNEIMVSFECQMLKSEKAAEDHIKQFIPKLVGQDAVVNIGPMSIRGLDFEAEEPGE
        GKNEIMVSFECQMLKSEKAAEDHI+QF+PKLVGQDAVVN+GPMSI GLDFEAEEP E
Subjt:  GKNEIMVSFECQMLKSEKAAEDHIKQFIPKLVGQDAVVNIGPMSIRGLDFEAEEPGE

XP_022980737.1 uncharacterized protein LOC111480016 isoform X2 [Cucurbita maxima]4.9e-7988.55Show/hide
Query:  LESGEKVGMAMEGVASLALLPCGSVSGHFIQLPDSICYGLHGTELECERECSRGEDYRLIKLTIMNYSNKQERTVVVECRGHDAARFHSIVHAHGWEEDV
        L+ G+KV MAMEGVAS+ALLPCGSVSGHFIQLP  +CYGLHGTELECERECSRGEDYRLIKLTI NY+N QERTVVVE RGHDAARFHSIVHAHGWEEDV
Subjt:  LESGEKVGMAMEGVASLALLPCGSVSGHFIQLPDSICYGLHGTELECERECSRGEDYRLIKLTIMNYSNKQERTVVVECRGHDAARFHSIVHAHGWEEDV

Query:  VSMVEKKHGKNEIMVSFECQMLKSEKAAEDHIKQFIPKLVGQDAVVNIGPMSIRGLDFEAEE-PGE
        V MVEKKHGKN+IM+SFECQ LKSEKAAEDHI+QFIPKLVGQDAVVN+GPMSIRGLDFEAEE PGE
Subjt:  VSMVEKKHGKNEIMVSFECQMLKSEKAAEDHIKQFIPKLVGQDAVVNIGPMSIRGLDFEAEE-PGE

XP_038877383.1 uncharacterized protein LOC120069678 [Benincasa hispida]9.9e-8093.71Show/hide
Query:  MAMEGVASLALLPCGSVSGHFIQLPDSICYGLHGTELECERECSRGEDYRLIKLTIMNYSNKQERTVVVECRGHDAARFHSIVHAHGWEEDVVSMVEKKH
        MAMEGVAS+ALLPCGSVSGHFIQLP SICYGLHGTELECERECSRGEDYRLIKLTI NY+NKQERTVV+ECRGHDAARF SIVHAHGWEEDVVSMVEKKH
Subjt:  MAMEGVASLALLPCGSVSGHFIQLPDSICYGLHGTELECERECSRGEDYRLIKLTIMNYSNKQERTVVVECRGHDAARFHSIVHAHGWEEDVVSMVEKKH

Query:  GKNEIMVSFECQMLKSEKAAEDHIKQFIPKLVGQDAVVNIGPMSIRGLDFEAEE--PGE
        GKNEIMVSFECQ+LKSEKAAEDHI+QFIPKLVGQDAVVNIGPMSIRGLDFEAEE  PGE
Subjt:  GKNEIMVSFECQMLKSEKAAEDHIKQFIPKLVGQDAVVNIGPMSIRGLDFEAEE--PGE

TrEMBL top hitse value%identityAlignment
A0A0A0LAZ2 Uncharacterized protein2.2e-8094.3Show/hide
Query:  MAMEGVASLALLPCGSVSGHFIQLPDSICYGLHGTELECERECSRGEDYRLIKLTIMNYSNKQERTVVVECRGHDAARFHSIVHAHGWEEDVVSMVEKKH
        MAMEGVAS+ALLPCGSVSGHFIQLP SICYGLHGTELECERECSRGEDYRLIKLTI NY+NKQERTVVVECRGHDAARFHSIVHAHGWEEDVVSMVEKKH
Subjt:  MAMEGVASLALLPCGSVSGHFIQLPDSICYGLHGTELECERECSRGEDYRLIKLTIMNYSNKQERTVVVECRGHDAARFHSIVHAHGWEEDVVSMVEKKH

Query:  GKNEIMVSFECQMLKSEKAAEDHIKQFIPKLVGQDAVVNIGPMSIRGLDFEAEE-PGE
        GKNEIMVSFECQMLKSEKAAEDHI+QF+PKLVGQDAVVN+GPMSI GLDFEAEE PGE
Subjt:  GKNEIMVSFECQMLKSEKAAEDHIKQFIPKLVGQDAVVNIGPMSIRGLDFEAEE-PGE

A0A1S3BN08 uncharacterized protein LOC1034918302.8e-8093.63Show/hide
Query:  MAMEGVASLALLPCGSVSGHFIQLPDSICYGLHGTELECERECSRGEDYRLIKLTIMNYSNKQERTVVVECRGHDAARFHSIVHAHGWEEDVVSMVEKKH
        MAMEGVAS+ALLPCGSVSGHFIQLP SICYGLHGTELECERECSRGEDYRLIKLTI NY+NKQERTVVVECRGHDAARFHSIVHAHGWEEDVVSMVE KH
Subjt:  MAMEGVASLALLPCGSVSGHFIQLPDSICYGLHGTELECERECSRGEDYRLIKLTIMNYSNKQERTVVVECRGHDAARFHSIVHAHGWEEDVVSMVEKKH

Query:  GKNEIMVSFECQMLKSEKAAEDHIKQFIPKLVGQDAVVNIGPMSIRGLDFEAEEPGE
        GKNEIMVSFECQMLKSEKAAEDHI+QF+PKLVGQDAVVN+GPMSI GLDFEAEEP E
Subjt:  GKNEIMVSFECQMLKSEKAAEDHIKQFIPKLVGQDAVVNIGPMSIRGLDFEAEEPGE

A0A5D3DF47 Uncharacterized protein8.8e-8292.59Show/hide
Query:  GEKVGMAMEGVASLALLPCGSVSGHFIQLPDSICYGLHGTELECERECSRGEDYRLIKLTIMNYSNKQERTVVVECRGHDAARFHSIVHAHGWEEDVVSM
        G+KVGMAMEGVAS+ALLPCGSVSGHFIQLP SICYGLHGTELECERECSRGEDYRLIKLTI NY+ KQERTVVVECRGHDAARFHSIVHAHGWEEDVVSM
Subjt:  GEKVGMAMEGVASLALLPCGSVSGHFIQLPDSICYGLHGTELECERECSRGEDYRLIKLTIMNYSNKQERTVVVECRGHDAARFHSIVHAHGWEEDVVSM

Query:  VEKKHGKNEIMVSFECQMLKSEKAAEDHIKQFIPKLVGQDAVVNIGPMSIRGLDFEAEEPGE
        VEKKHGKNEIMVSFECQMLKSEKAAEDHI+QF+PKLVGQDAVVN+GPMSI GLDFEAEE  E
Subjt:  VEKKHGKNEIMVSFECQMLKSEKAAEDHIKQFIPKLVGQDAVVNIGPMSIRGLDFEAEEPGE

A0A6J1IS39 uncharacterized protein LOC111480016 isoform X22.4e-7988.55Show/hide
Query:  LESGEKVGMAMEGVASLALLPCGSVSGHFIQLPDSICYGLHGTELECERECSRGEDYRLIKLTIMNYSNKQERTVVVECRGHDAARFHSIVHAHGWEEDV
        L+ G+KV MAMEGVAS+ALLPCGSVSGHFIQLP  +CYGLHGTELECERECSRGEDYRLIKLTI NY+N QERTVVVE RGHDAARFHSIVHAHGWEEDV
Subjt:  LESGEKVGMAMEGVASLALLPCGSVSGHFIQLPDSICYGLHGTELECERECSRGEDYRLIKLTIMNYSNKQERTVVVECRGHDAARFHSIVHAHGWEEDV

Query:  VSMVEKKHGKNEIMVSFECQMLKSEKAAEDHIKQFIPKLVGQDAVVNIGPMSIRGLDFEAEE-PGE
        V MVEKKHGKN+IM+SFECQ LKSEKAAEDHI+QFIPKLVGQDAVVN+GPMSIRGLDFEAEE PGE
Subjt:  VSMVEKKHGKNEIMVSFECQMLKSEKAAEDHIKQFIPKLVGQDAVVNIGPMSIRGLDFEAEE-PGE

A0A6J1IUF0 uncharacterized protein LOC111480016 isoform X11.2e-7889.57Show/hide
Query:  GEKVGMAMEGVASLALLPCGSVSGHFIQLPDSICYGLHGTELECERECSRGEDYRLIKLTIMNYSNKQERTVVVECRGHDAARFHSIVHAHGWEEDVVSM
        G+KV MAMEGVAS+ALLPCGSVSGHFIQLP  +CYGLHGTELECERECSRGEDYRLIKLTI NY+N QERTVVVE RGHDAARFHSIVHAHGWEEDVV M
Subjt:  GEKVGMAMEGVASLALLPCGSVSGHFIQLPDSICYGLHGTELECERECSRGEDYRLIKLTIMNYSNKQERTVVVECRGHDAARFHSIVHAHGWEEDVVSM

Query:  VEKKHGKNEIMVSFECQMLKSEKAAEDHIKQFIPKLVGQDAVVNIGPMSIRGLDFEAEE-PGE
        VEKKHGKN+IM+SFECQ LKSEKAAEDHI+QFIPKLVGQDAVVN+GPMSIRGLDFEAEE PGE
Subjt:  VEKKHGKNEIMVSFECQMLKSEKAAEDHIKQFIPKLVGQDAVVNIGPMSIRGLDFEAEE-PGE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G29280.1 unknown protein4.6e-6770Show/hide
Query:  EKVGMAMEGVASLALLPCGSVSGHFIQLPDSICYGLHGTELECERECSRGEDYRLIKLTIMNYSNKQERTVVVECRGHDAARFHSIVHAHGWEEDVVSMV
        ++ G   EGVAS+ALLPCG++SGHFIQ+P SICYGLHGTEL CE ECSRGEDYRLIKLTI++Y+ K+E+TVVVEC+GHDAAR + + HAHGWEEDV+ +V
Subjt:  EKVGMAMEGVASLALLPCGSVSGHFIQLPDSICYGLHGTELECERECSRGEDYRLIKLTIMNYSNKQERTVVVECRGHDAARFHSIVHAHGWEEDVVSMV

Query:  EKKHGKNEIMVSFECQMLKSEKAAEDHIKQFIPKLVGQDAVVNIGPMSIRGLDFEAEEPG
        E+KHGK ++ VSFEC+ LK+++AAEDHI+QF+PKL G DAV+NIGPM I GLDF A E G
Subjt:  EKKHGKNEIMVSFECQMLKSEKAAEDHIKQFIPKLVGQDAVVNIGPMSIRGLDFEAEEPG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCAAAATTACCCAAGATGCCGTGGGCACCCGGTGGGAAGCAAGTGGGCAAGGGGTGCTCGCAGGGGCGTGGTGTCAGGGTCGTGGGGCGCTAGGTGTGGGC
GTTGGGGGTTTGGTGCTAGGTGTTGGCATTGGGCATTGGCGTTGGGTGCTGGAATCAGGAGAGAAGGTGGGAATGGCGATGGAAGGAGTTGCTTCGCTTGCACTT
TTGCCTTGCGGCTCTGTCTCTGGCCACTTCATTCAACTTCCCGACTCCATCTGCTACGGCCTCCATGGCACTGAATTGGAATGTGAAAGAGAGTGCAGCAGGGGT
GAGGATTATCGTTTGATCAAGCTCACAATTATGAACTACAGTAACAAGCAAGAACGAACAGTCGTCGTTGAATGTAGAGGCCATGATGCTGCACGGTTTCACAGC
ATCGTTCATGCTCATGGTTGGGAAGAGGATGTAGTGAGCATGGTTGAAAAAAAACATGGAAAGAATGAGATTATGGTTTCCTTCGAGTGTCAGATGTTGAAGTCT
GAGAAAGCGGCCGAAGATCACATCAAACAGTTTATTCCCAAATTAGTAGGGCAAGACGCTGTGGTTAACATAGGGCCAATGAGCATCAGAGGATTGGATTTTGAA
GCAGAGGAGCCAGGAGAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCCAAAATTACCCAAGATGCCGTGGGCACCCGGTGGGAAGCAAGTGGGCAAGGGGTGCTCGCAGGGGCGTGGTGTCAGGGTCGTGGGGCGCTAGGTGTGGGC
GTTGGGGGTTTGGTGCTAGGTGTTGGCATTGGGCATTGGCGTTGGGTGCTGGAATCAGGAGAGAAGGTGGGAATGGCGATGGAAGGAGTTGCTTCGCTTGCACTT
TTGCCTTGCGGCTCTGTCTCTGGCCACTTCATTCAACTTCCCGACTCCATCTGCTACGGCCTCCATGGCACTGAATTGGAATGTGAAAGAGAGTGCAGCAGGGGT
GAGGATTATCGTTTGATCAAGCTCACAATTATGAACTACAGTAACAAGCAAGAACGAACAGTCGTCGTTGAATGTAGAGGCCATGATGCTGCACGGTTTCACAGC
ATCGTTCATGCTCATGGTTGGGAAGAGGATGTAGTGAGCATGGTTGAAAAAAAACATGGAAAGAATGAGATTATGGTTTCCTTCGAGTGTCAGATGTTGAAGTCT
GAGAAAGCGGCCGAAGATCACATCAAACAGTTTATTCCCAAATTAGTAGGGCAAGACGCTGTGGTTAACATAGGGCCAATGAGCATCAGAGGATTGGATTTTGAA
GCAGAGGAGCCAGGAGAGTGATGCAACCATCTGAAGCATTTTGAGTTAAAAGACTTGTCTGATGAAGTAGTCTCTCTTTAAATCTTATTTCAACCAATGGTCTTT
AGATTAAGGTCTATAATCGAGAATGGCGACTGAATTTTGTGAATGGCGACTGAATTTTGTTTGCCACAGAGATTTTTCTCTCATCTGTACTCGTTCAATTGGTTT
AATGAGCAAAAAGTTCATGGGTCAAATTCAATATTTGGCTACTAGAAGTCTTTTAATACTGAAGGATATGTCTGGAGGAAGACGTTTGCAAACTAGAGAATTGTA
TTTCAAACTTATATAGATAAAATATACAAGAGAACACTCCC
Protein sequenceShow/hide protein sequence
MSKITQDAVGTRWEASGQGVLAGAWCQGRGALGVGVGGLVLGVGIGHWRWVLESGEKVGMAMEGVASLALLPCGSVSGHFIQLPDSICYGLHGTELECERECSRG
EDYRLIKLTIMNYSNKQERTVVVECRGHDAARFHSIVHAHGWEEDVVSMVEKKHGKNEIMVSFECQMLKSEKAAEDHIKQFIPKLVGQDAVVNIGPMSIRGLDFE
AEEPGE