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CaUC05G094090 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC05G094090
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionUnknown protein
Genome locationCiama_Chr05:22693391..22695276
RNA-Seq ExpressionCaUC05G094090
SyntenyCaUC05G094090
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAA3027943.1 ribosomal S7 [Olea europaea subsp. europaea]7.7e-1069.49Show/hide
Query:  NTRGRSKAARPIGR--GPVGQRKGEVLMPGRSRMTGECILLNSGSETLKKVQEAMKSGK
        N R R    R  G+  GPVGQRKG+VL+PGRSRMT ECILLNSGSETL KVQEA+KS +
Subjt:  NTRGRSKAARPIGR--GPVGQRKGEVLMPGRSRMTGECILLNSGSETLKKVQEAMKSGK
GEX46072.1 hypothetical protein [Tanacetum cinerariifolium]8.2e-0475Show/hide
Query:  FIARRERIEASISRSVGNESIRRETLFHGNGKSRTGSYWL
        F+AR ERIEASISRSVGNESIR  TLFHG GK     YWL
Subjt:  FIARRERIEASISRSVGNESIRRETLFHGNGKSRTGSYWL
KAB9092651.1 hypothetical protein FH972_026962 [Carpinus fangiana]5.7e-0555Show/hide
Query:  SIPSCSTYPFTPQGFRTARQPRFIARRERIEASISR-SVGNESIRRETLFHGNG--KSRTGSYWLGGTEGRVGRVSSLVA
        +I S     F+ +GFRTARQ RFIARRE IEASISR SVG+     E L  G      +T   + GGTEGRVGRV SL+A
Subjt:  SIPSCSTYPFTPQGFRTARQPRFIARRERIEASISR-SVGNESIRRETLFHGNG--KSRTGSYWLGGTEGRVGRVSSLVA
TrEMBL top hitse value%identityAlignment
A0A5N6L5L2 Uncharacterized protein2.8e-0555Show/hide
Query:  SIPSCSTYPFTPQGFRTARQPRFIARRERIEASISR-SVGNESIRRETLFHGNG--KSRTGSYWLGGTEGRVGRVSSLVA
        +I S     F+ +GFRTARQ RFIARRE IEASISR SVG+     E L  G      +T   + GGTEGRVGRV SL+A
Subjt:  SIPSCSTYPFTPQGFRTARQPRFIARRERIEASISR-SVGNESIRRETLFHGNG--KSRTGSYWLGGTEGRVGRVSSLVA
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTCGATCATCGCTCATCCCTCGTGTTCTCTCCCGTGAAGTGATTAATCCGGGTATGCAATCCCTATGGAAAAGAAATAGTTCTTCCATCCCCTCCTGTTCCACCTA
TCCCTTCACTCCCCAGGGATTCCGTACAGCTAGACAACCACGGTTCATCGCTCGGAGAGAAAGAATAGAAGCAAGCATTTCCCGTTCAGTCGGTAATGAATCAATACGCA
GGGAAACTCTCTTCCATGGGAATGGCAAGTCTCGGACAGGCTCATATTGGTTGGGGGGCACAGAAGGGAGAGTGGGCCGGGTTTCAAGCCTGGTTGCATTAAGATTTCAA
TATCATCCTTCGAGAATCTTTAATCCTCATAGGTACCGGTCACCCAAATTCTCGAGTTTGAATAGGGTCGGGGTTCATCATATTGAAAAGTGGCATGGCTTCGGTTTCGA
TGAAAATGGAAAGAATAGAACCTACTATCCACCCACGCCAGATCCCCTAAACAACCTACATCCAAAGATGAGAGTTGTTGAAGAGCCTTTTTTTTTAACGGCTTATACCC
CAAAAAAAGCTAGTACCTCGTTAGCATTGCAACAACACGAAAAGAAAGCGAGATACTGGAATACGAGGGGAAGGAGCAAAGCAGCTCGACCGATAGGGAGAGGACCCGTT
GGTCAAAGGAAAGGGGAGGTCCTGATGCCGGGACGGAGCCGTATGACAGGAGAGTGTATACTCTTGAACTCCGGGAGCGAGACCCTAAAAAAAGTGCAAGAAGCTATGAA
GAGTGGTAAACTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTCGATCATCGCTCATCCCTCGTGTTCTCTCCCGTGAAGTGATTAATCCGGGTATGCAATCCCTATGGAAAAGAAATAGTTCTTCCATCCCCTCCTGTTCCACCTA
TCCCTTCACTCCCCAGGGATTCCGTACAGCTAGACAACCACGGTTCATCGCTCGGAGAGAAAGAATAGAAGCAAGCATTTCCCGTTCAGTCGGTAATGAATCAATACGCA
GGGAAACTCTCTTCCATGGGAATGGCAAGTCTCGGACAGGCTCATATTGGTTGGGGGGCACAGAAGGGAGAGTGGGCCGGGTTTCAAGCCTGGTTGCATTAAGATTTCAA
TATCATCCTTCGAGAATCTTTAATCCTCATAGGTACCGGTCACCCAAATTCTCGAGTTTGAATAGGGTCGGGGTTCATCATATTGAAAAGTGGCATGGCTTCGGTTTCGA
TGAAAATGGAAAGAATAGAACCTACTATCCACCCACGCCAGATCCCCTAAACAACCTACATCCAAAGATGAGAGTTGTTGAAGAGCCTTTTTTTTTAACGGCTTATACCC
CAAAAAAAGCTAGTACCTCGTTAGCATTGCAACAACACGAAAAGAAAGCGAGATACTGGAATACGAGGGGAAGGAGCAAAGCAGCTCGACCGATAGGGAGAGGACCCGTT
GGTCAAAGGAAAGGGGAGGTCCTGATGCCGGGACGGAGCCGTATGACAGGAGAGTGTATACTCTTGAACTCCGGGAGCGAGACCCTAAAAAAAGTGCAAGAAGCTATGAA
GAGTGGTAAACTCTGA
Protein sequenceShow/hide protein sequence
MGRSSLIPRVLSREVINPGMQSLWKRNSSSIPSCSTYPFTPQGFRTARQPRFIARRERIEASISRSVGNESIRRETLFHGNGKSRTGSYWLGGTEGRVGRVSSLVALRFQ
YHPSRIFNPHRYRSPKFSSLNRVGVHHIEKWHGFGFDENGKNRTYYPPTPDPLNNLHPKMRVVEEPFFLTAYTPKKASTSLALQQHEKKARYWNTRGRSKAARPIGRGPV
GQRKGEVLMPGRSRMTGECILLNSGSETLKKVQEAMKSGKL