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CaUC05G094580 (gene) of Watermelon (USVL246-FR2) v1 genome

Gene IDCaUC05G094580
OrganismCitrullus amarus (Watermelon (USVL246-FR2) v1)
DescriptionRibosomal protein L23
Genome locationCiama_Chr05:24541976..24551063
RNA-Seq ExpressionCaUC05G094580
SyntenyCaUC05G094580
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0003677 - DNA binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB1210637.1 hypothetical protein CJ030_MR6G010321 [Morella rubra]3.8e-1896Show/hide
Query:  MINGSSRRDLLLNSQNFCRSIPVGAENPSLSRLCYRMLWGSRNRRALILG
        MINGSSRRDLLLNSQNFCRSIP GAENPSLSRLCYR LWGSRNRRALILG
Subjt:  MINGSSRRDLLLNSQNFCRSIPVGAENPSLSRLCYRMLWGSRNRRALILG
KAG6735399.1 hypothetical protein POTOM_062040 [Populus tomentosa]3.8e-1896Show/hide
Query:  MINGSSRRDLLLNSQNFCRSIPVGAENPSLSRLCYRMLWGSRNRRALILG
        MINGSSRRDLLLNSQNFCRSIP GAENPSLSRLCYR LWGSRNRRALILG
Subjt:  MINGSSRRDLLLNSQNFCRSIPVGAENPSLSRLCYRMLWGSRNRRALILG
PLY71578.1 hypothetical protein LSAT_1X88180 [Lactuca sativa]3.8e-1896Show/hide
Query:  MINGSSRRDLLLNSQNFCRSIPVGAENPSLSRLCYRMLWGSRNRRALILG
        MINGSSRRDLLLNSQNFCRSIP GAENPSLSRLCYR LWGSRNRRALILG
Subjt:  MINGSSRRDLLLNSQNFCRSIPVGAENPSLSRLCYRMLWGSRNRRALILG
PWA76046.1 hypothetical protein CTI12_AA236480 [Artemisia annua]3.8e-1896Show/hide
Query:  MINGSSRRDLLLNSQNFCRSIPVGAENPSLSRLCYRMLWGSRNRRALILG
        MINGSSRRDLLLNSQNFCRSIP GAENPSLSRLCYR LWGSRNRRALILG
Subjt:  MINGSSRRDLLLNSQNFCRSIPVGAENPSLSRLCYRMLWGSRNRRALILG
PWA91043.1 hypothetical protein CTI12_AA094830 [Artemisia annua]3.8e-1896Show/hide
Query:  MINGSSRRDLLLNSQNFCRSIPVGAENPSLSRLCYRMLWGSRNRRALILG
        MINGSSRRDLLLNSQNFCRSIP GAENPSLSRLCYR LWGSRNRRALILG
Subjt:  MINGSSRRDLLLNSQNFCRSIPVGAENPSLSRLCYRMLWGSRNRRALILG
TrEMBL top hitse value%identityAlignment
A0A2N9HQ72 Uncharacterized protein1.9e-1896Show/hide
Query:  MINGSSRRDLLLNSQNFCRSIPVGAENPSLSRLCYRMLWGSRNRRALILG
        MINGSSRRDLLLNSQNFCRSIP GAENPSLSRLCYR LWGSRNRRALILG
Subjt:  MINGSSRRDLLLNSQNFCRSIPVGAENPSLSRLCYRMLWGSRNRRALILG
A0A2N9HR91 Uncharacterized protein1.9e-1896Show/hide
Query:  MINGSSRRDLLLNSQNFCRSIPVGAENPSLSRLCYRMLWGSRNRRALILG
        MINGSSRRDLLLNSQNFCRSIP GAENPSLSRLCYR LWGSRNRRALILG
Subjt:  MINGSSRRDLLLNSQNFCRSIPVGAENPSLSRLCYRMLWGSRNRRALILG
A0A2N9I3B0 Uncharacterized protein1.9e-1896Show/hide
Query:  MINGSSRRDLLLNSQNFCRSIPVGAENPSLSRLCYRMLWGSRNRRALILG
        MINGSSRRDLLLNSQNFCRSIP GAENPSLSRLCYR LWGSRNRRALILG
Subjt:  MINGSSRRDLLLNSQNFCRSIPVGAENPSLSRLCYRMLWGSRNRRALILG
A0A2N9I7K2 Uncharacterized protein1.9e-1896Show/hide
Query:  MINGSSRRDLLLNSQNFCRSIPVGAENPSLSRLCYRMLWGSRNRRALILG
        MINGSSRRDLLLNSQNFCRSIP GAENPSLSRLCYR LWGSRNRRALILG
Subjt:  MINGSSRRDLLLNSQNFCRSIPVGAENPSLSRLCYRMLWGSRNRRALILG
A0A6B9QQT2 Ribosomal protein L231.9e-1896Show/hide
Query:  MINGSSRRDLLLNSQNFCRSIPVGAENPSLSRLCYRMLWGSRNRRALILG
        MINGSSRRDLLLNSQNFCRSIP GAENPSLSRLCYR LWGSRNRRALILG
Subjt:  MINGSSRRDLLLNSQNFCRSIPVGAENPSLSRLCYRMLWGSRNRRALILG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATAAACGGCTCATCTCGCCGTGACCTTCTCTTGAATTCTCAAAACTTCTGTCGTTCCATCCCCGTAGGGGCAGAGAACCCATCGTTGTCTCGGTTGTGCTACCGAAT
GCTCTGGGGAAGTCGGAATAGGAGAGCACTCATCTTGGGATGCCTCGAACATGGCGGTGTGGACGAACCTCATACGCGTCATGGGCTGGACGACGATGGCAACGATGTGG
ATGAGCTGGACGACGATGGTGTGGAGAAATCGGGTGGAGAAAAAGTTGAAAGGAAGATGGTTACTGCTGTACGAAGCCCATAA
mRNA sequenceShow/hide mRNA sequence
ATGATAAACGGCTCATCTCGCCGTGACCTTCTCTTGAATTCTCAAAACTTCTGTCGTTCCATCCCCGTAGGGGCAGAGAACCCATCGTTGTCTCGGTTGTGCTACCGAAT
GCTCTGGGGAAGTCGGAATAGGAGAGCACTCATCTTGGGATGCCTCGAACATGGCGGTGTGGACGAACCTCATACGCGTCATGGGCTGGACGACGATGGCAACGATGTGG
ATGAGCTGGACGACGATGGTGTGGAGAAATCGGGTGGAGAAAAAGTTGAAAGGAAGATGGTTACTGCTGTACGAAGCCCATAA
Protein sequenceShow/hide protein sequence
MINGSSRRDLLLNSQNFCRSIPVGAENPSLSRLCYRMLWGSRNRRALILGCLEHGGVDEPHTRHGLDDDGNDVDELDDDGVEKSGGEKVERKMVTAVRSP